CaUC07G131120 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G131120
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr07: 11800138 .. 11801660 (+)
RNA-Seq Expression	CaUC07G131120
Synteny	CaUC07G131120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGGATTTGTGCACGGGTGGATCTGGTCGGATCTGCACGCATTGGTGGATCTGTACCTGGGTTGCTGACGAAGAAAGACAGATCTGAGAGGTTTGCCGACGAAAACGCGACGGGAGACTAATTTAGCAATGATTGAGTACAACCAAAACGAGGAAGAACATATGGAGTTGCTTGATCTGGTCGACGGCAGGAGATTTGGTAGCGGTGGCGAATCTAGTAGGTGGCAGAAAATTTCTTGAACAACGGCGGAATCTGAACAGAGCAGACCAGCGGTGGATTTCTTGAACAACAACGAACAGATCGACCTAAACAAAATAGATCGATGGCGGAACTAACCAGATCTGGGCAAACAGCAGAGATCCGGATCTAGCGGCGACAGATCGGAACGAGTGGGCGGCAACGGCTAATAAAACCCTAGGAACAAGAGGTCTCTGATACCATGTGAAGAATATTGTATTTTATTGTATTTTTGTGTTAATACATTATAAAGATAACACAGGAAATAAATATACAGAGATAATACAAAGAAAGTTATTCCCAAATTAATTTAGAATTATACCCTAATTAATTTGGATTCTATTTAGCCTAAAATAATCCCTTAAATTACGTTAACAAGGAGTGTGATGATTCTTTTCACCACAAGGACAGTCAATTGGACAAGGGGTTTAATCCCGATTTTCACAAGATTTTTTATCTAGTTTCTATGAATGATAGTGATTGAAAACGAAATTGAAACTTTTTGTCGCGGGCCGTTATATTCAAATTAATACTCTATTTTTAGTTTAGTTTCCCATTTGAACATTTGTAGGCTATATAGTTAGATTATTCAGTTTATTTTTAGGATTTGGATAAGAACTGAATAGTTGCATTGTCTGATGAGGCCTTCCACTTCCACTTCTATTGCAAAATTCTTGGTTAATCTTAATCCGCTTTAATATAACTGTTGAAAATTTTTGTTTGAGTAAAGCAAGAAGGAACGAAATGTTTCTTTTGTTCTTGCTGAAGTAGAAGTTAATTAATGGAACTCTGATTTGTTTGATTATGTTTAAGGGATTTTAACTGATGTTGTTTGTAGATTGGCAGTCTGTTTCGAGACCTGACGCATTCTCTACAACCTCTTCACACAATAATCCACTTGATGAGCCTAGTCCTCTTGGTTTGGTGCTAAGGAAGAGCCTGTCCTTGTTGGATCTAATTCAAATGAAACTTTCACAGGGGAGTGTGTCTACTGCTGTTAGACCTTCAAATAGTGAAACTTCTAACTTCATGGTTAAAACAAAAGCCAAGACGCTACCATGTCAGGTACCAATGAGAAACTAAAGGCTTCAAACTTCCCAGCTTCACTTTTCAAGATTGGACATTGGGAGGTCTTTATTTAATTATTAGATATTGTTGTCCTACTCGTTTTAGATTTGTAAAGCATTTGTCAGCTGACTTATTTTATGATGATAGTACAAATCAAGACATGAAGGTGATTTAGTGGCGAAGTGTTACTATGCCAAGCATAAGCTTGTATAG

mRNA sequence

ATGGGTCGGATTTGTGCACGGGTGGATCTGGTCGGATCTGCACGCATTGGTGGATCTGTACCTGGGTTGCTGACGAAGAAAGACAGATCTGAGAGAGATCCGGATCTAGCGGCGACAGATCGGAACGAGTGGGCGGCAACGGCTAATAAAACCCTAGGAACAAGAGATTGGCAGTCTGTTTCGAGACCTGACGCATTCTCTACAACCTCTTCACACAATAATCCACTTGATGAGCCTAGTCCTCTTGGTTTGGTGCTAAGGAAGAGCCTGTCCTTGTTGGATCTAATTCAAATGAAACTTTCACAGGGGAGTGTGTCTACTGCTGTTAGACCTTCAAATAGTGAAACTTCTAACTTCATGGTTAAAACAAAAGCCAAGACGCTACCATGTCAGTACAAATCAAGACATGAAGGTGATTTAGTGGCGAAGTGTTACTATGCCAAGCATAAGCTTGTATAG

Coding sequence (CDS)

ATGGGTCGGATTTGTGCACGGGTGGATCTGGTCGGATCTGCACGCATTGGTGGATCTGTACCTGGGTTGCTGACGAAGAAAGACAGATCTGAGAGAGATCCGGATCTAGCGGCGACAGATCGGAACGAGTGGGCGGCAACGGCTAATAAAACCCTAGGAACAAGAGATTGGCAGTCTGTTTCGAGACCTGACGCATTCTCTACAACCTCTTCACACAATAATCCACTTGATGAGCCTAGTCCTCTTGGTTTGGTGCTAAGGAAGAGCCTGTCCTTGTTGGATCTAATTCAAATGAAACTTTCACAGGGGAGTGTGTCTACTGCTGTTAGACCTTCAAATAGTGAAACTTCTAACTTCATGGTTAAAACAAAAGCCAAGACGCTACCATGTCAGTACAAATCAAGACATGAAGGTGATTTAGTGGCGAAGTGTTACTATGCCAAGCATAAGCTTGTATAG

Protein sequence

MGRICARVDLVGSARIGGSVPGLLTKKDRSERDPDLAATDRNEWAATANKTLGTRDWQSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETSNFMVKTKAKTLPCQYKSRHEGDLVAKCYYAKHKLV

Homology

[Close]

BLAST of CaUC07G131120 vs. NCBI nr
Match: KAE8653061.1 (hypothetical protein Csa_019547 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-26
Identity = 75/117 (64.10%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETS 117
           QSV R D  S+TSSHNNPLDEPSPLGLVLRKS SLLDLIQMKLSQGS +TA  PSN+ET 
Sbjct: 45  QSVLRSDTLSSTSSHNNPLDEPSPLGLVLRKSPSLLDLIQMKLSQGSSTTAAGPSNAETF 104

Query: 118 NFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
           +F+VK               KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 105 DFVVKAESQDATVPGTNEKLKASNFPASHLKIGRWEYKSRHEGDLVAKCYYAKHKLV 161

[Close]

BLAST of CaUC07G131120 vs. NCBI nr
Match: XP_004146718.1 (uncharacterized protein LOC101219584 isoform X2 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-26
Identity = 75/117 (64.10%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETS 117
           QSV R D  S+TSSHNNPLDEPSPLGLVLRKS SLLDLIQMKLSQGS +TA  PSN+ET 
Sbjct: 44  QSVLRSDTLSSTSSHNNPLDEPSPLGLVLRKSPSLLDLIQMKLSQGSSTTAAGPSNAETF 103

Query: 118 NFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
           +F+VK               KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 104 DFVVKAESQDATVPGTNEKLKASNFPASHLKIGRWEYKSRHEGDLVAKCYYAKHKLV 160

[Close]

BLAST of CaUC07G131120 vs. NCBI nr
Match: XP_038879516.1 (uncharacterized protein LOC120071357 isoform X2 [Benincasa hispida])

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-26
Identity = 77/118 (65.25%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVS-TAVRPSNSET 117
           +SVS PD  S TSSHNNPLDEPSPLGLVLRKS SLLDLIQMKLSQGS S TA  PSN+ET
Sbjct: 43  KSVSGPDTLSATSSHNNPLDEPSPLGLVLRKSPSLLDLIQMKLSQGSASTTAAGPSNTET 102

Query: 118 SNFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
            NF+VK               KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 103 FNFVVKAESQDATVPGTNEKLKASNFPASLLRIGRWEYKSRHEGDLVAKCYYAKHKLV 160

[Close]

BLAST of CaUC07G131120 vs. NCBI nr
Match: XP_011655652.1 (uncharacterized protein LOC101219584 isoform X1 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-26
Identity = 75/117 (64.10%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETS 117
           QSV R D  S+TSSHNNPLDEPSPLGLVLRKS SLLDLIQMKLSQGS +TA  PSN+ET 
Sbjct: 45  QSVLRSDTLSSTSSHNNPLDEPSPLGLVLRKSPSLLDLIQMKLSQGSSTTAAGPSNAETF 104

Query: 118 NFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
           +F+VK               KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 105 DFVVKAESQDATVPGTNEKLKASNFPASHLKIGRWEYKSRHEGDLVAKCYYAKHKLV 161

[Close]

BLAST of CaUC07G131120 vs. NCBI nr
Match: XP_038879515.1 (uncharacterized protein LOC120071357 isoform X1 [Benincasa hispida])

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-26
Identity = 77/118 (65.25%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVS-TAVRPSNSET 117
           +SVS PD  S TSSHNNPLDEPSPLGLVLRKS SLLDLIQMKLSQGS S TA  PSN+ET
Sbjct: 43  KSVSGPDTLSATSSHNNPLDEPSPLGLVLRKSPSLLDLIQMKLSQGSASTTAAGPSNTET 102

Query: 118 SNFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
            NF+VK               KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 103 FNFVVKAESQDATVPGTNEKLKASNFPASLLRIGRWEYKSRHEGDLVAKCYYAKHKLV 160

[Close]

BLAST of CaUC07G131120 vs. ExPASy TrEMBL
Match: A0A0A0LTD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257910 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.4e-27
Identity = 75/117 (64.10%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETS 117
           QSV R D  S+TSSHNNPLDEPSPLGLVLRKS SLLDLIQMKLSQGS +TA  PSN+ET 
Sbjct: 161 QSVLRSDTLSSTSSHNNPLDEPSPLGLVLRKSPSLLDLIQMKLSQGSSTTAAGPSNAETF 220

Query: 118 NFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
           +F+VK               KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 221 DFVVKAESQDATVPGTNEKLKASNFPASHLKIGRWEYKSRHEGDLVAKCYYAKHKLV 277

[Close]

BLAST of CaUC07G131120 vs. ExPASy TrEMBL
Match: A0A1S3B9Q0 (uncharacterized protein LOC103487331 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103487331 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 9.7e-27
Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETS 117
           QSV   D  S+TSSHNNPLDEPSPLGL+LRKS SLLDLIQMKLSQGS STA   SN+ET 
Sbjct: 45  QSVLGSDTLSSTSSHNNPLDEPSPLGLMLRKSPSLLDLIQMKLSQGSSSTAAGSSNAETF 104

Query: 118 NFMVKTKAK--TLP-----CQYKSRHEGDLVAKCYYAKHKLV 153
           +F+VK++++  T+P      +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 105 DFVVKSESQDATVPGTNEKLKYKSRHEGDLVAKCYYAKHKLV 146

[Close]

BLAST of CaUC07G131120 vs. ExPASy TrEMBL
Match: A0A1S3B8H0 (uncharacterized protein LOC103487331 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487331 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.1e-25
Identity = 73/117 (62.39%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETS 117
           QSV   D  S+TSSHNNPLDEPSPLGL+LRKS SLLDLIQMKLSQGS STA   SN+ET 
Sbjct: 45  QSVLGSDTLSSTSSHNNPLDEPSPLGLMLRKSPSLLDLIQMKLSQGSSSTAAGSSNAETF 104

Query: 118 NFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
           +F+VK+              KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 105 DFVVKSESQDATVPGTNEKLKASNFPASLLKIGRWEYKSRHEGDLVAKCYYAKHKLV 161

[Close]

BLAST of CaUC07G131120 vs. ExPASy TrEMBL
Match: A0A1S3B8X8 (uncharacterized protein LOC103487331 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487331 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.1e-25
Identity = 73/117 (62.39%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETS 117
           QSV   D  S+TSSHNNPLDEPSPLGL+LRKS SLLDLIQMKLSQGS STA   SN+ET 
Sbjct: 44  QSVLGSDTLSSTSSHNNPLDEPSPLGLMLRKSPSLLDLIQMKLSQGSSSTAAGSSNAETF 103

Query: 118 NFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
           +F+VK+              KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 104 DFVVKSESQDATVPGTNEKLKASNFPASLLKIGRWEYKSRHEGDLVAKCYYAKHKLV 160

[Close]

BLAST of CaUC07G131120 vs. ExPASy TrEMBL
Match: A0A1S3B908 (uncharacterized protein LOC103487331 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487331 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.1e-25
Identity = 73/117 (62.39%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 58  QSVSRPDAFSTTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQGSVSTAVRPSNSETS 117
           QSV   D  S+TSSHNNPLDEPSPLGL+LRKS SLLDLIQMKLSQGS STA   SN+ET 
Sbjct: 45  QSVLGSDTLSSTSSHNNPLDEPSPLGLMLRKSPSLLDLIQMKLSQGSSSTAAGSSNAETF 104

Query: 118 NFMVKT--------------KAKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
           +F+VK+              KA   P         +YKSRHEGDLVAKCYYAKHKLV
Sbjct: 105 DFVVKSESQDATVPGTNEKLKASNFPASLLKIGRWEYKSRHEGDLVAKCYYAKHKLV 161

[Close]

BLAST of CaUC07G131120 vs. TAIR 10
Match: AT2G24100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 7.9e-13
Identity = 47/96 (48.96%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 68  TTSSHNNPLDEPSPLGLVLRKSLSLLDLIQMKLSQ-GSVSTAVRPSNSETSNF--MVKTK 127
           T+ S  + L+EPSPLGL L+KS S  +LI+MKLSQ G  S +V+  +        + K K
Sbjct: 51  TSVSKFSLLEEPSPLGLSLKKSPSFQELIEMKLSQSGDDSNSVKKESFGFGGVGTVEKLK 110

Query: 128 AKTLPC--------QYKSRHEGDLVAKCYYAKHKLV 153
           A   P         +YKSR+EGDLVAKCY+AKHKLV
Sbjct: 111 ASNFPATILRIGQWEYKSRYEGDLVAKCYFAKHKLV 146

[Close]

BLAST of CaUC07G131120 vs. TAIR 10
Match: AT4G30780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 56/151 (37.09%), Postives = 73/151 (48.34%), Query Frame = 0


Query: 35  DLAATDRNEWAATANKTLGTRDWQSVSRPDAFSTT--SSHNNPLDEPSPLGLVLRKSLSL 94
           ++A  D  E     NK   +R W     P   S+T   +  NPLDEPSPLGL L+KS SL
Sbjct: 29  EIAEDDLEEEHGPLNKR--SRLWS----PGTSSSTMAPAKYNPLDEPSPLGLSLKKSPSL 88

Query: 95  LDLIQMKLS-----------------------QGSVSTAVRPSNSETSNFMVKTKAKTLP 153
           L+LIQMK++                         +++ A     +     + K KA   P
Sbjct: 89  LELIQMKITHCGDPKAAETLKAGALGSGLKRESKTIAAAASVGPTLAPGSIEKLKASNFP 148

The following BLAST results are available for this feature:

BLAST of CaUC07G131120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653061.1	1.5e-26	64.10	hypothetical protein Csa_019547 [Cucumis sativus]	[more]
XP_004146718.1	1.5e-26	64.10	uncharacterized protein LOC101219584 isoform X2 [Cucumis sativus]	[more]
XP_038879516.1	1.5e-26	65.25	uncharacterized protein LOC120071357 isoform X2 [Benincasa hispida]	[more]
XP_011655652.1	1.5e-26	64.10	uncharacterized protein LOC101219584 isoform X1 [Cucumis sativus]	[more]
XP_038879515.1	1.5e-26	65.25	uncharacterized protein LOC120071357 isoform X1 [Benincasa hispida]	[more]

BLAST of CaUC07G131120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC07G131120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTD1	7.4e-27	64.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257910 PE=4 SV=1	[more]
A0A1S3B9Q0	9.7e-27	70.59	uncharacterized protein LOC103487331 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B8H0	3.1e-25	62.39	uncharacterized protein LOC103487331 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B8X8	3.1e-25	62.39	uncharacterized protein LOC103487331 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B908	3.1e-25	62.39	uncharacterized protein LOC103487331 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CaUC07G131120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24100.1	7.9e-13	48.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G30780.1	1.7e-12	37.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..39
None	No IPR available	PANTHER	PTHR33494	OS02G0793800 PROTEIN	coord: 59..152
None	No IPR available	PANTHER	PTHR33494:SF19	ATP-DEPENDENT DNA HELICASE	coord: 59..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G131120.1	CaUC07G131120.1	mRNA