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CaUC07G128680 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATCCTCAGTTGGAATGCCCGGGGTGTTGGTAACCCTAAGGCATTCCGGGCATTGTCTGACCTTCTAAGGATCAGGCGTCCTGCGATTGTGTTTCTATCTGAGACAAAGTGTGGTGAAGAGACTACGGATAGAATCAAGAGAAATGGGAATTTCCTTGAATGCTTTGCGGTTAAAAGCATTGGTTCAAAAGGTGGCCTGTGTCTACTTTGGAAAGCTAAGGTCGATTTGAGAGTAATCAAATCAATGGAGATTTACTGGCATATATGGTTTCCCGCAAGGTGA ATGAAAATCCTCAGTTGGAATGCCCGGGGTGTTGGTAACCCTAAGGCATTCCGGGCATTGTCTGACCTTCTAAGGATCAGGCGTCCTGCGATTGTGTTTCTATCTGAGACAAAGTGTGGTGAAGAGACTACGGATAGAATCAAGAGAAATGGGAATTTCCTTGAATGCTTTGCGGTTAAAAGCATTGGTTCAAAAGGTGGCCTGTGTCTACTTTGGAAAGCTAAGGTCGATTTGAGAGTAATCAAATCAATGGAGATTTACTGGCATATATGGTTTCCCGCAAGGTGA ATGAAAATCCTCAGTTGGAATGCCCGGGGTGTTGGTAACCCTAAGGCATTCCGGGCATTGTCTGACCTTCTAAGGATCAGGCGTCCTGCGATTGTGTTTCTATCTGAGACAAAGTGTGGTGAAGAGACTACGGATAGAATCAAGAGAAATGGGAATTTCCTTGAATGCTTTGCGGTTAAAAGCATTGGTTCAAAAGGTGGCCTGTGTCTACTTTGGAAAGCTAAGGTCGATTTGAGAGTAATCAAATCAATGGAGATTTACTGGCATATATGGTTTCCCGCAAGGTGA MKILSWNARGVGNPKAFRALSDLLRIRRPAIVFLSETKCGEETTDRIKRNGNFLECFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIYWHIWFPAR Homology
BLAST of CaUC07G128680 vs. NCBI nr
Match: XP_042964610.1 (uncharacterized protein LOC122298825 [Carya illinoinensis]) HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14 Identity = 38/90 (42.22%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of CaUC07G128680 vs. NCBI nr
Match: XP_042950087.1 (uncharacterized protein LOC122282202 [Carya illinoinensis]) HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14 Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of CaUC07G128680 vs. NCBI nr
Match: XP_024039545.1 (uncharacterized protein LOC112098147 [Citrus clementina]) HSP 1 Score: 87.4 bits (215), Expect = 7.1e-14 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of CaUC07G128680 vs. NCBI nr
Match: XP_042962672.1 (uncharacterized protein LOC122296942 [Carya illinoinensis]) HSP 1 Score: 87.0 bits (214), Expect = 9.3e-14 Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of CaUC07G128680 vs. NCBI nr
Match: XP_042952137.1 (uncharacterized protein LOC122289225 [Carya illinoinensis]) HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13 Identity = 37/90 (41.11%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of CaUC07G128680 vs. ExPASy TrEMBL
Match: A0A5B6VAU9 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_001361 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.2e-13 Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of CaUC07G128680 vs. ExPASy TrEMBL
Match: A0A2I4EA22 (uncharacterized protein LOC108987722 OS=Juglans regia OX=51240 GN=LOC108987722 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.8e-13 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of CaUC07G128680 vs. ExPASy TrEMBL
Match: A0A5B6VDB0 (BEACH domain-containing lvsC OS=Gossypium australe OX=47621 GN=EPI10_002129 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 8.5e-13 Identity = 34/88 (38.64%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of CaUC07G128680 vs. ExPASy TrEMBL
Match: A0A2N9F8Y2 (Endo/exonuclease/phosphatase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11116 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12 Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of CaUC07G128680 vs. ExPASy TrEMBL
Match: A0A2N9F8N4 (F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11121 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12 Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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