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CaUC07G127950 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACCTAAAGGTATGCTCGCATTCTGATATTGTGTTTGTTTCAGCACTAGATGTTCGTTTATTTCAATTTCTGCCTCCGTTTGTTTCAAAAGAAGCTTGGTACCGTAATACGTTCCCAGTATTTGAAGCCTAGTTTCTTAAATCTACTTCTGCTCTGAACTACAAAACCCAGTGCTTGTTGGATGGGATTTTAGTATGATATGGAAGGAGAAGAGTAGTTGATTAAAGCGAATTCTATGTAGGTTTTGCAATTTATTTAGCGTTTTAGATGGAAGAACAACATTTTGAGAAGGTTTAGAGCACTTTTTATATGTGTGAATTGTATTGAATTCACTGGTGGAATCTGAGCTTTCTAAACTGCGCTGGGTAGTTTTAAGCTTTTGATTCTGAAGGTTTTTTGTTTTCGTCTTTTGCAGCCGACAGTAGCAAAAAGGCTGATCCCAAGGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCTAAGAAGATTAGAACATCAGTCACATTCCATAGGCCAAAGACATTGAAGAAGGATAGGAATCCCAAGTATCCCAGAATCAGTGCAACTCCAAGGAATAAGTTGGACCAGTATCAAATTCTGAAATATCCACTGACCACAGAGTCTGCAATGAAGAAGATTGAGGATAATAATACCCTTGTCTTTATTGTTGACATTCGTGCCAACAAGAAAAACATTAAAGATGCTGTTAAGAAGATGTATGATATCCAGACCAAGAAAGTGAACACTTTAATCAGGTATGCATGGTTCATAAGTTTTGATGAACAGCAATTTAGATTCTACATTTGCTAATTCAGTATTAATCATCTTTTAGAAAGAAACTTGGTATGATACAGAAGAAACAATAGTTCAGGTCATGCTTTCGAACACTGCAGATAAAAATACCTCAACTATAATTTTATTGTTTGGGCCTGATTTTGCATATTATCTTACTCAACACCTTTAATCTATGTACAAACTATCTATTGATTAATCCATTGTGATGATGAATGATTGATGTTCTAATGTATTTTCCTACATTCCTGGTATGCAGGCCCGACGGAACGAAGAAGGCATACGTTAGGTTAACTCCAGATTATGATGCCCTAGATGTGGCAAACAAGATTGGTATCATCTAAACTGCAGATTTTGGAGCGAGTATTTTCATTGCAATTGGTTACATGTTTAAATTTGGAGAGCATTTTGTAGTAGGACCCTAGTTTTATTTTAGCTTTTTTTTTTTTTAATATGTATTGGTATTTGTTCACTCAGATAGACTGGGTTCACAATACTTGGAAGGATGGAATATGCATTCCAACCATTTTCATTATAGTTTGCTTCAGACTCCATTACATCATTACTGA ATGGCACCTAAAGCCGACAGTAGCAAAAAGGCTGATCCCAAGGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCTAAGAAGATTAGAACATCAGTCACATTCCATAGGCCAAAGACATTGAAGAAGGATAGGAATCCCAAGTATCCCAGAATCAGTGCAACTCCAAGGAATAAGTTGGACCAGTATCAAATTCTGAAATATCCACTGACCACAGAGTCTGCAATGAAGAAGATTGAGGATAATAATACCCTTGTCTTTATTGTTGACATTCGTGCCAACAAGAAAAACATTAAAGATGCTGTTAAGAAGATGTATGATATCCAGACCAAGAAAGTGAACACTTTAATCAGGCCCGACGGAACGAAGAAGGCATACGTTAGGTTAACTCCAGATTATGATGCCCTAGATGTGGCAAACAAGATTGATAGACTGGGTTCACAATACTTGGAAGGATGGAATATGCATTCCAACCATTTTCATTATAGTTTGCTTCAGACTCCATTACATCATTACTGA ATGGCACCTAAAGCCGACAGTAGCAAAAAGGCTGATCCCAAGGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCTAAGAAGATTAGAACATCAGTCACATTCCATAGGCCAAAGACATTGAAGAAGGATAGGAATCCCAAGTATCCCAGAATCAGTGCAACTCCAAGGAATAAGTTGGACCAGTATCAAATTCTGAAATATCCACTGACCACAGAGTCTGCAATGAAGAAGATTGAGGATAATAATACCCTTGTCTTTATTGTTGACATTCGTGCCAACAAGAAAAACATTAAAGATGCTGTTAAGAAGATGTATGATATCCAGACCAAGAAAGTGAACACTTTAATCAGGCCCGACGGAACGAAGAAGGCATACGTTAGGTTAACTCCAGATTATGATGCCCTAGATGTGGCAAACAAGATTGATAGACTGGGTTCACAATACTTGGAAGGATGGAATATGCATTCCAACCATTTTCATTATAGTTTGCTTCAGACTCCATTACATCATTACTGA MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIDRLGSQYLEGWNMHSNHFHYSLLQTPLHHY Homology
BLAST of CaUC07G127950 vs. NCBI nr
Match: XP_004147702.1 (60S ribosomal protein L23a [Cucumis sativus] >XP_008461635.1 PREDICTED: 60S ribosomal protein L23a [Cucumis melo] >KAA0050284.1 60S ribosomal protein L23a-like [Cucumis melo var. makuwa] >KAE8647979.1 hypothetical protein Csa_000656 [Cucumis sativus] >TYK14757.1 60S ribosomal protein L23a-like [Cucumis melo var. makuwa]) HSP 1 Score: 282.7 bits (722), Expect = 2.2e-72 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of CaUC07G127950 vs. NCBI nr
Match: XP_022995723.1 (60S ribosomal protein L23a [Cucurbita maxima]) HSP 1 Score: 280.0 bits (715), Expect = 1.4e-71 Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of CaUC07G127950 vs. NCBI nr
Match: XP_038891458.1 (60S ribosomal protein L23a [Benincasa hispida]) HSP 1 Score: 279.3 bits (713), Expect = 2.4e-71 Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0
BLAST of CaUC07G127950 vs. NCBI nr
Match: KAG6601015.1 (60S ribosomal protein L23a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 278.9 bits (712), Expect = 3.2e-71 Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0
BLAST of CaUC07G127950 vs. NCBI nr
Match: KAG7031627.1 (60S ribosomal protein L23a, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 277.7 bits (709), Expect = 7.0e-71 Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy Swiss-Prot
Match: Q9AT35 (60S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 4.1e-66 Identity = 137/151 (90.73%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy Swiss-Prot
Match: Q07761 (60S ribosomal protein L23a OS=Nicotiana tabacum OX=4097 GN=RPL23A PE=2 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 3.5e-65 Identity = 135/151 (89.40%), Postives = 140/151 (92.72%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy Swiss-Prot
Match: O22644 (60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 6.6e-64 Identity = 134/151 (88.74%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy Swiss-Prot
Match: Q8LD46 (60S ribosomal protein L23a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL23AA PE=2 SV=2) HSP 1 Score: 244.2 bits (622), Expect = 1.1e-63 Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy Swiss-Prot
Match: Q9M3C3 (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.2e-62 Identity = 131/151 (86.75%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy TrEMBL
Match: A0A5A7U4W7 (50S ribosomal protein L23, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3369G00030 PE=3 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy TrEMBL
Match: A0A0A0KS61 (50S ribosomal protein L23, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G180850 PE=3 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy TrEMBL
Match: A0A1S3CFM9 (50S ribosomal protein L23, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500191 PE=3 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy TrEMBL
Match: A0A6J1K8U2 (50S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491145 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 6.9e-72 Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of CaUC07G127950 vs. ExPASy TrEMBL
Match: A0A6J1DJ76 (50S ribosomal protein L23, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021582 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.4e-71 Identity = 146/150 (97.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of CaUC07G127950 vs. TAIR 10
Match: AT2G39460.1 (ribosomal protein L23AA ) HSP 1 Score: 244.2 bits (622), Expect = 8.0e-65 Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of CaUC07G127950 vs. TAIR 10
Match: AT2G39460.2 (ribosomal protein L23AA ) HSP 1 Score: 244.2 bits (622), Expect = 8.0e-65 Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of CaUC07G127950 vs. TAIR 10
Match: AT3G55280.1 (ribosomal protein L23AB ) HSP 1 Score: 240.7 bits (613), Expect = 8.9e-64 Identity = 131/151 (86.75%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of CaUC07G127950 vs. TAIR 10
Match: AT3G55280.2 (ribosomal protein L23AB ) HSP 1 Score: 240.7 bits (613), Expect = 8.9e-64 Identity = 131/151 (86.75%), Postives = 136/151 (90.07%), Query Frame = 0
BLAST of CaUC07G127950 vs. TAIR 10
Match: AT3G55280.3 (ribosomal protein L23AB ) HSP 1 Score: 229.6 bits (584), Expect = 2.0e-60 Identity = 127/151 (84.11%), Postives = 132/151 (87.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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