CaUC07G125940 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G125940
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	LOB domain-containing protein
Location	Ciama_Chr07: 1010207 .. 1011430 (-)
RNA-Seq Expression	CaUC07G125940
Synteny	CaUC07G125940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGGCTCAGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCTAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTCAATCATCTTATTTCATTCTTTTTCTTCTTCTTTCTATGTTTTTCTTCTCCATTCGAATAACGGGTCAACTTAAAGATTCGAACTTTTTCACTTCTCAATAGGGTTTCAACTAAATTCTTGTTTCATGACGGTTTTGTTTTTAGTTTCTGGTTCTTCCAATTTCTTTGTTGTGGGGCTTTCAATAAAAGAAAAAAACATTTGAATTGTGAAAAACAATAACAAGTTTTAGTTTTCAATAGTTGAGTTGGATTTTGGAGAAAATTAACAAAAGAAAGAAATTGGTGTGTGTATAGTGTTTATAAGGTAAACTTTAAACAATCTAATGTTTTCATCAAACAAGCCTAAGCAAAAAAAAAAGTTAGGTTTTAATGTTGGTTATTAGTCATTGAAACCCTAACTCAGCTCCATTGTTTTGTTGGGATTAAATGTTTAAATTTATAAGATTGAATTTACCATAACTTATTGGCTTAAGCTTTTGTTATTTGTTTTTTTTAGGTTGTGAGTCTTCAAGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAATGCGTCTGGTAACGGGGGCGGAGTGAATGAAAAGATTAATAATAGAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCAAACGTAACGCTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCCAACGGGAACTATGAACATCACATGACAAAAATGGAGGAAAGTGGATCATATGGGAGCTATGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCTGTTGCTTTTGGCAATAGACATTGGTGA

mRNA sequence

ATGACGGGCTCAGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCTAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAAGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAATGCGTCTGGTAACGGGGGCGGAGTGAATGAAAAGATTAATAATAGAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCAAACGTAACGCTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCCAACGGGAACTATGAACATCACATGACAAAAATGGAGGAAAGTGGATCATATGGGAGCTATGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCTGTTGCTTTTGGCAATAGACATTGGTGA

Coding sequence (CDS)

ATGACGGGCTCAGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCTAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAAGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAATGCGTCTGGTAACGGGGGCGGAGTGAATGAAAAGATTAATAATAGAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCAAACGTAACGCTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCCAACGGGAACTATGAACATCACATGACAAAAATGGAGGAAAGTGGATCATATGGGAGCTATGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCTGTTGCTTTTGGCAATAGACATTGGTGA

Protein sequence

MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGGGVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQSNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRHW

Homology

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BLAST of CaUC07G125940 vs. NCBI nr
Match: XP_038888992.1 (LOB domain-containing protein 14-like [Benincasa hispida])

HSP 1 Score: 460.3 bits (1183), Expect = 1.0e-125
Identity = 232/245 (94.69%), Postives = 235/245 (95.92%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE
Sbjct: 26  MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 85

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG
Sbjct: 86  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 145

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTP--NNNSASN--PYYDENYCIM 180
           GVNEKIN+RKVPSHPQDLHSWFQSEQPN+TLEFNP P P  NNNSASN   YYDENY IM
Sbjct: 146 GVNEKINSRKVPSHPQDLHSWFQSEQPNITLEFNPTPIPNNNNNSASNYPNYYDENYHIM 205

Query: 181 VNSQSNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAF 240
           VNS SNGNYEHHM KMEESGSYGS+EETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAF
Sbjct: 206 VNSHSNGNYEHHMAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAF 265

Query: 241 GNRHW 242
           GNRHW
Sbjct: 266 GNRHW 270

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BLAST of CaUC07G125940 vs. NCBI nr
Match: XP_008447445.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 454.9 bits (1169), Expect = 4.3e-124
Identity = 229/243 (94.24%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNAS N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEKIN+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGS+EETSGYSMYTLDQLHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of CaUC07G125940 vs. NCBI nr
Match: XP_004152038.1 (LOB domain-containing protein 29 [Cucumis sativus] >KGN57933.1 hypothetical protein Csa_010658 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 3.6e-123
Identity = 226/243 (93.00%), Postives = 234/243 (96.30%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNAS N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEK+N+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKVNSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNANYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGS+EETSGYSMYTLDQLHSNVQQWSF+++ DDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDTVDDLQSVAFGN 240

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 243

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BLAST of CaUC07G125940 vs. NCBI nr
Match: XP_022963632.1 (LOB domain-containing protein 29-like [Cucurbita moschata] >XP_022967412.1 LOB domain-containing protein 29-like [Cucurbita maxima] >KAG6571512.1 LOB domain-containing protein CRL1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011260.1 LOB domain-containing protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 438.3 bits (1126), Expect = 4.2e-119
Identity = 220/241 (91.29%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN SGN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQ 180
              +  N+RKVP HPQDLHSWFQSEQPNV LEFNPNPT  NNSASNPYYDENY IMVNSQ
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNPYYDENYSIMVNSQ 180

Query: 181 SNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRH 240
           SN NYEHHM KMEESGSYGS+EETSGYSMYTLD LHSNVQQWSFNESADDLQSVAFGNRH
Sbjct: 181 SNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRH 238

Query: 241 W 242
           W
Sbjct: 241 W 238

[Close]

BLAST of CaUC07G125940 vs. NCBI nr
Match: XP_023511754.1 (LOB domain-containing protein 29-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.3 bits (1118), Expect = 3.5e-118
Identity = 219/241 (90.87%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN SGN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQ 180
              +  N+RKVP HPQDLHSWFQSEQPNV LEFNPNPT  NNSASNPYYDENY IMVNSQ
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNPYYDENYSIMVNSQ 180

Query: 181 SNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRH 240
           SN NYEHHM KMEESGSY S+EETSGYSMYTLD LHSNVQQWSFNESADDLQSVAFGNRH
Sbjct: 181 SNENYEHHMAKMEESGSYESFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRH 238

Query: 241 W 242
           W
Sbjct: 241 W 238

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BLAST of CaUC07G125940 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.5e-50
Identity = 100/124 (80.65%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTG GSPCGACKFLRRKCVRGCVFAPYFCHEQGA HFAAIHKVFGASNVSKLLA LP+++
Sbjct: 1   MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLAD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESI----MNAS 120
           R EAAVTISYEAQARL+DPIYGCV+HIFALQQQV++LQAQLASLK  AA+ I    + A+
Sbjct: 61  RPEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQGIHHQDVGAT 120

[Close]

BLAST of CaUC07G125940 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-49
Identity = 108/196 (55.10%), Postives = 136/196 (69.39%), Query Frame = 0


Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LPIS+R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNA-SGNGG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVV+LQA+L  LK+QAA+S++ A S    
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPTSE 125

Query: 122 GVNEKI-NNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSAS-NPYYDENYCIMVN 181
             N    +  K P H    + +   +Q ++  +   + T  +  A+ + Y++E    M  
Sbjct: 126 NPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATESSYHNETSSGMGE 185

Query: 182 SQSNGNYEHHMTKMEE 195
                + E H+    +
Sbjct: 186 FSIYSDLEQHLNTFNQ 201

[Close]

BLAST of CaUC07G125940 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.4e-47
Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIM 114
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVV+LQ QL  LK+QA +S+M
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

[Close]

BLAST of CaUC07G125940 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-42
Identity = 97/186 (52.15%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVVSLQAQ+  L+E+A+        +  
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRFPQ---DDP 120

Query: 121 GVNEKINNRKVPSH-PQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNS 180
           G N K   + +    PQDLH+WF   Q  +  +F+P      ++  +  ++E+ C   +S
Sbjct: 121 GCNMKQQEKVLAQQMPQDLHNWF--HQGILDSDFDPMSGTTRDNERSMDHNESPC---SS 178

Query: 181 QSNGNY 186
             + NY
Sbjct: 181 NESLNY 178

[Close]

BLAST of CaUC07G125940 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.2e-41
Identity = 84/125 (67.20%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +PI +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGGGV 122
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A    +A+G+    
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

Query: 123 NEKIN 128
           +E  N
Sbjct: 131 SESTN 135

[Close]

BLAST of CaUC07G125940 vs. ExPASy TrEMBL
Match: A0A1S3BHF9 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124
Identity = 229/243 (94.24%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNAS N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEKIN+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGS+EETSGYSMYTLDQLHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of CaUC07G125940 vs. ExPASy TrEMBL
Match: A0A0A0L817 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123
Identity = 226/243 (93.00%), Postives = 234/243 (96.30%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNAS N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEK+N+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKVNSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNANYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGS+EETSGYSMYTLDQLHSNVQQWSF+++ DDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDTVDDLQSVAFGN 240

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of CaUC07G125940 vs. ExPASy TrEMBL
Match: A0A6J1HQS1 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111466949 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.0e-119
Identity = 220/241 (91.29%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN SGN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQ 180
              +  N+RKVP HPQDLHSWFQSEQPNV LEFNPNPT  NNSASNPYYDENY IMVNSQ
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNPYYDENYSIMVNSQ 180

Query: 181 SNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRH 240
           SN NYEHHM KMEESGSYGS+EETSGYSMYTLD LHSNVQQWSFNESADDLQSVAFGNRH
Sbjct: 181 SNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRH 238

Query: 241 W 242
           W
Sbjct: 241 W 238

[Close]

BLAST of CaUC07G125940 vs. ExPASy TrEMBL
Match: A0A6J1HFS0 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111463902 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.0e-119
Identity = 220/241 (91.29%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN SGN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQ 180
              +  N+RKVP HPQDLHSWFQSEQPNV LEFNPNPT  NNSASNPYYDENY IMVNSQ
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNPYYDENYSIMVNSQ 180

Query: 181 SNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRH 240
           SN NYEHHM KMEESGSYGS+EETSGYSMYTLD LHSNVQQWSFNESADDLQSVAFGNRH
Sbjct: 181 SNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRH 238

Query: 241 W 242
           W
Sbjct: 241 W 238

[Close]

BLAST of CaUC07G125940 vs. ExPASy TrEMBL
Match: A0A5A7T7B7 (LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00850 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 219/243 (90.12%), Postives = 225/243 (92.59%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RCEAAVTISYEAQARLQDPIYGC          VVSLQAQLASLKEQAAESIMNAS N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGC----------VVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEKIN+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGS+EETSGYSMYTLDQLHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 233

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 233

[Close]

BLAST of CaUC07G125940 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 195.7 bits (496), Expect = 4.4e-50
Identity = 108/196 (55.10%), Postives = 136/196 (69.39%), Query Frame = 0


Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LPIS+R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNA-SGNGG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVV+LQA+L  LK+QAA+S++ A S    
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPTSE 125

Query: 122 GVNEKI-NNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSAS-NPYYDENYCIMVN 181
             N    +  K P H    + +   +Q ++  +   + T  +  A+ + Y++E    M  
Sbjct: 126 NPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATESSYHNETSSGMGE 185

Query: 182 SQSNGNYEHHMTKMEE 195
                + E H+    +
Sbjct: 186 FSIYSDLEQHLNTFNQ 201

[Close]

BLAST of CaUC07G125940 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-48
Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIM 114
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVV+LQ QL  LK+QA +S+M
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

[Close]

BLAST of CaUC07G125940 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43
Identity = 97/186 (52.15%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVVSLQAQ+  L+E+A+        +  
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRFPQ---DDP 120

Query: 121 GVNEKINNRKVPSH-PQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNS 180
           G N K   + +    PQDLH+WF   Q  +  +F+P      ++  +  ++E+ C   +S
Sbjct: 121 GCNMKQQEKVLAQQMPQDLHNWF--HQGILDSDFDPMSGTTRDNERSMDHNESPC---SS 178

Query: 181 QSNGNY 186
             + NY
Sbjct: 181 NESLNY 178

[Close]

BLAST of CaUC07G125940 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 169.1 bits (427), Expect = 4.4e-42
Identity = 84/125 (67.20%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +PI +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGGGV 122
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A    +A+G+    
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

Query: 123 NEKIN 128
           +E  N
Sbjct: 131 SESTN 135

[Close]

BLAST of CaUC07G125940 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 75/107 (70.09%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERC 62
           G G PCGACKFLRRKCV GC+FAPYF  EQG+ +FAA+HKVFGASNVSKLL  +P+  R 
Sbjct: 33  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRS 92

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAA 110
           +A VTI YEAQAR++DPIYGCV+HIFALQQQVV+LQA+++ L+   A
Sbjct: 93  DAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

The following BLAST results are available for this feature:

BLAST of CaUC07G125940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888992.1	1.0e-125	94.69	LOB domain-containing protein 14-like [Benincasa hispida]	[more]
XP_008447445.1	4.3e-124	94.24	PREDICTED: LOB domain-containing protein 29 [Cucumis melo]	[more]
XP_004152038.1	3.6e-123	93.00	LOB domain-containing protein 29 [Cucumis sativus] >KGN57933.1 hypothetical prot...	[more]
XP_022963632.1	4.2e-119	91.29	LOB domain-containing protein 29-like [Cucurbita moschata] >XP_022967412.1 LOB d...	[more]
XP_023511754.1	3.5e-118	90.87	LOB domain-containing protein 29-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC07G125940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5UG13	9.5e-50	80.65	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9M2J7	6.2e-49	55.10	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
Q9SLB6	4.4e-47	79.65	LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S...	[more]
Q9SJW5	1.9e-42	52.15	LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S...	[more]
Q9SLB7	6.2e-41	67.20	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]

BLAST of CaUC07G125940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHF9	2.1e-124	94.24	LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV...	[more]
A0A0A0L817	1.8e-123	93.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV...	[more]
A0A6J1HQS1	2.0e-119	91.29	LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11146694...	[more]
A0A6J1HFS0	2.0e-119	91.29	LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A5A7T7B7	1.2e-116	90.12	LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CaUC07G125940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58190.1	4.4e-50	55.10	lateral organ boundaries-domain 29	[more]
AT2G42440.1	3.1e-48	79.65	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G31310.1	1.4e-43	52.15	LOB domain-containing protein 14	[more]
AT2G42430.1	4.4e-42	67.20	lateral organ boundaries-domain 16	[more]
AT2G45420.1	1.6e-39	70.09	LOB domain-containing protein 18	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 1..238
None	No IPR available	PANTHER	PTHR31529:SF41	LOB DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..238
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 7..105 e-value: 1.0E-35 score: 122.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 6..108 score: 22.139231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G125940.1	CaUC07G125940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus