CaUC07G125930 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G125930
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLOB domain-containing protein
LocationCiama_Chr07: 1000525 .. 1002090 (+)
RNA-Seq ExpressionCaUC07G125930
SyntenyCaUC07G125930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCCATGGCTTCTTCTTCTTCCTCTTCCTCTGCAAATACTAGTGTGTCAGGCAGTGGCGGTGGCAGTGGCTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATTTTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGATGTGTTGCTCATATTTTTGCGCTCCAACAACAGGTGTGATCATTAATTTTCTTTAATATTACTTGTTTGCTTTAATCATCACTTATTAGCTCCATCGATTCGTCGTTTCTCAAGCCTACGGATGGACAAAGGTTAAGAATTATATGAATAAAATATCAGGGTTTTTCTTTTAGGCTTTGTTTGATAATCTTTTGAGTTCCGAAAACTAGGCTTAAAAACGTTTTAGCCTTCTAAAATCTAAATTAAGGTTTTAAAAAAAAGTTTGAAAACTCGTTTTTGTTAAATTCTGCTAACTAAAATTGAATCATTATAGAAAAATTGTAAAGAAACAAATATAATTTATAGAAAAACAGAAAACTAAAACTAAAAATGGTTGTTAAGTGAAACCTAAAAGATTAGATTTTTTTCATAACCCATATAAAATTTTTTAACTTTTGAATTCAGCGATGATTTTCAATTGAAAATTTTCAACATGTTATTGTTATTTTTTATTTGCTTTCATGGGAGTGTCCTCAGGGAGAGGGGTAGAACAAAAAAAAAAAACTTATCCACGTCGATTTAGAACTTTTTTGAATTGGTGATTATTAAATACTTACAAAGTTAATACAAATAGAAACGGACCCTGAATTACCGATGTTACCATGTTGAGTTTGAATGTAAAAAAAAACAAAAATTATCTTTAAAATGGTTAATTTTTTAATAATTTGTTGGGTTTTGAAGGTGGCATATTTACAAACACAGCTAATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATGGATTCAGGAGGTAATATGGAGATTCAATGGACAGGCAATTTCAATAACAATCTCTTCAATGGAATTCCAAATAATTATCAAACTCAGATTATGAACAACCCAGCAGTTTCCCCTCGGAGTTCTTTAGAATCAGCTGCCAACAATGATGAAGCTTTATTATTCATAAATAATCAAAATCACCTTCATGAAAGCCAAAGCAGATCACCAGAAGAATCTCAATTTCTTCAACCATTTCCTATTAAAAAATTGCCTTCTTCTCATGCTGATCTTGGGGAACTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAATTAATGGAAAAAAAAAGGATGTAATTTAATTTCATTGTTTTGTGAAAGACAATGGATTTTGATGATATAGTCATTTTATAAGAGCCCAAAAAGTTATGTATATAAAGTCATATGAGGTATTCATGTTCAAACTTTTATTCTTAGCAAAAGAGGAGCCTTAAACTTATTGTG

mRNA sequence

ATTCCCATGGCTTCTTCTTCTTCCTCTTCCTCTGCAAATACTAGTGTGTCAGGCAGTGGCGGTGGCAGTGGCTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATTTTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGATGTGTTGCTCATATTTTTGCGCTCCAACAACAGGTGGCATATTTACAAACACAGCTAATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATGGATTCAGGAGGTAATATGGAGATTCAATGGACAGGCAATTTCAATAACAATCTCTTCAATGGAATTCCAAATAATTATCAAACTCAGATTATGAACAACCCAGCAGTTTCCCCTCGGAGTTCTTTAGAATCAGCTGCCAACAATGATGAAGCTTTATTATTCATAAATAATCAAAATCACCTTCATGAAAGCCAAAGCAGATCACCAGAAGAATCTCAATTTCTTCAACCATTTCCTATTAAAAAATTGCCTTCTTCTCATGCTGATCTTGGGGAACTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAATTAATGGAAAAAAAAAGGATGTAATTTAATTTCATTGTTTTGTGAAAGACAATGGATTTTGATGATATAGTCATTTTATAAGAGCCCAAAAAGTTATGTATATAAAGTCATATGAGGTATTCATGTTCAAACTTTTATTCTTAGCAAAAGAGGAGCCTTAAACTTATTGTG

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCCTCTTCCTCTGCAAATACTAGTGTGTCAGGCAGTGGCGGTGGCAGTGGCTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATTTTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGATGTGTTGCTCATATTTTTGCGCTCCAACAACAGGTGGCATATTTACAAACACAGCTAATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATGGATTCAGGAGGTAATATGGAGATTCAATGGACAGGCAATTTCAATAACAATCTCTTCAATGGAATTCCAAATAATTATCAAACTCAGATTATGAACAACCCAGCAGTTTCCCCTCGGAGTTCTTTAGAATCAGCTGCCAACAATGATGAAGCTTTATTATTCATAAATAATCAAAATCACCTTCATGAAAGCCAAAGCAGATCACCAGAAGAATCTCAATTTCTTCAACCATTTCCTATTAAAAAATTGCCTTCTTCTCATGCTGATCTTGGGGAACTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAA

Protein sequence

MASSSSSSSANTSVSGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPRSSLESAANNDEALLFINNQNHLHESQSRSPEESQFLQPFPIKKLPSSHADLGELQALALRMMRN
Homology
BLAST of CaUC07G125930 vs. NCBI nr
Match: XP_038888851.1 (LOB domain-containing protein 16-like [Benincasa hispida])

HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 216/241 (89.63%), Postives = 219/241 (90.87%), Query Frame = 0

Query: 1   MASSSSSS-SANTSVSGSGGGS-GSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 60
           MASSSSSS S     SG GGGS GSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH
Sbjct: 1   MASSSSSSVSCGGGGSGGGGGSGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 60

Query: 61  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 120
           KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL
Sbjct: 61  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 120

Query: 121 MQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIP----NNYQTQIM-NNPAVSPRSSLE 180
           MQAKAQLAQTLMDS GNMEIQWT NFNNNL NGIP    NNYQTQIM NNPAVSP+SSLE
Sbjct: 121 MQAKAQLAQTLMDSRGNMEIQWTENFNNNLSNGIPNNFQNNYQTQIMNNNPAVSPQSSLE 180

Query: 181 SAANNDEALLFINNQNHLHESQSRSPEESQFLQPFPIKKLPSSHA-DLGELQALALRMMR 234
           SAANNDEALLFIN  ++ HESQSRSPEESQFLQPFP KKLPSSH  DLGELQALALRMMR
Sbjct: 181 SAANNDEALLFINQIHNFHESQSRSPEESQFLQPFPTKKLPSSHVHDLGELQALALRMMR 240

BLAST of CaUC07G125930 vs. NCBI nr
Match: XP_008461877.1 (PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domain-containing protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 368.2 bits (944), Expect = 5.1e-98
Identity = 207/237 (87.34%), Postives = 213/237 (89.87%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSG--GGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV 62
           +SSSS+S NTSVSG G  GG GSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV
Sbjct: 2   ASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV 61

Query: 63  FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ 122
           FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ
Sbjct: 62  FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ 121

Query: 123 AKAQLAQTLMDSGGNMEIQWTGNFNN-NLFNG-IP-NNYQTQIMNNPAVSPRSSLESAAN 182
           AKAQLAQTLMDSG NMEIQWTG+FNN NL NG IP NNYQTQIMNNP  +P+SSLESAAN
Sbjct: 122 AKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP--TPQSSLESAAN 181

Query: 183 NDEALLFINNQNHLHESQ-SRSPEESQFLQPFPIKKLPSSHADLGELQALALRMMRN 234
           NDEALLFIN     HESQ SRS +E Q LQPFP KKL SSHADLGEL ALALRMMRN
Sbjct: 182 NDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of CaUC07G125930 vs. NCBI nr
Match: KAE8650674.1 (hypothetical protein Csa_009642 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 9.6e-97
Identity = 207/242 (85.54%), Postives = 214/242 (88.43%), Query Frame = 0

Query: 3   SSSSSSSANTSV------SGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 62
           +SSSS+S NTS+      SGSGGG GSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA
Sbjct: 55  ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 114

Query: 63  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 122
           IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT
Sbjct: 115 IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 174

Query: 123 QLMQAKAQLAQTLMDSGGNMEIQWTGNF-NNNLFNG-IP-NNYQTQIMNNPAVSPRSSLE 182
           QLM AKAQLA+TLMDSG NMEIQWTG+F NNNL NG IP NNYQTQI NNP  SP+SSLE
Sbjct: 175 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP--SPQSSLE 234

Query: 183 SAANNDEALLFINNQNHLHESQ-SRSPEESQFLQPFPIKKLP-SSHADLGELQALALRMM 234
           SAANNDEALLFIN     HESQ SRS +E QFLQPFP KKLP SSHADLGEL ALALRMM
Sbjct: 235 SAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMM 294

BLAST of CaUC07G125930 vs. NCBI nr
Match: XP_004152037.2 (LOB domain-containing protein 16 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 9.6e-97
Identity = 207/242 (85.54%), Postives = 214/242 (88.43%), Query Frame = 0

Query: 3   SSSSSSSANTSV------SGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 62
           +SSSS+S NTS+      SGSGGG GSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA
Sbjct: 2   ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 61

Query: 63  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 122
           IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT
Sbjct: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121

Query: 123 QLMQAKAQLAQTLMDSGGNMEIQWTGNF-NNNLFNG-IP-NNYQTQIMNNPAVSPRSSLE 182
           QLM AKAQLA+TLMDSG NMEIQWTG+F NNNL NG IP NNYQTQI NNP  SP+SSLE
Sbjct: 122 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP--SPQSSLE 181

Query: 183 SAANNDEALLFINNQNHLHESQ-SRSPEESQFLQPFPIKKLP-SSHADLGELQALALRMM 234
           SAANNDEALLFIN     HESQ SRS +E QFLQPFP KKLP SSHADLGEL ALALRMM
Sbjct: 182 SAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMM 241

BLAST of CaUC07G125930 vs. NCBI nr
Match: XP_022967414.1 (LOB domain-containing protein 16-like [Cucurbita maxima])

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-87
Identity = 186/239 (77.82%), Postives = 201/239 (84.10%), Query Frame = 0

Query: 2   ASSSSSSSANTSVS-------GSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARF 61
           +SSSSSS+AN+SVS       G GGG GSPCGACKFLRRKCVA+CIFAPYF SEQGAARF
Sbjct: 3   SSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARF 62

Query: 62  AAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYL 121
           AA+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYL
Sbjct: 63  AAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYL 122

Query: 122 QTQLMQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPRSSLES 181
           Q QLMQAKAQLAQTLMDSGGNME+QWTG+FNNNL NGIP+NY+TQIM NPAVSP+SS+ES
Sbjct: 123 QAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIM-NPAVSPQSSVES 182

Query: 182 AANNDEALLFINNQNHLHESQSRSPEESQFLQPFPIKKLPSSHADLGELQALALRMMRN 234
           AANND AL+F+   NH  ESQ+ +   S            S H DLGELQALALRMMRN
Sbjct: 183 AANNDAALMFM---NHYQESQTLARRRS-----------ASCHGDLGELQALALRMMRN 226

BLAST of CaUC07G125930 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-55
Identity = 133/244 (54.51%), Postives = 163/244 (66.80%), Query Frame = 0

Query: 12  TSVSGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLL 71
           +S +G+  G+GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL
Sbjct: 3   SSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLL 62

Query: 72  HVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMD 131
           +VP+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A     
Sbjct: 63  NVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTS 122

Query: 132 SGG---------NMEIQW-------TGNFNNNLFNGIPNNYQTQIMNNPAVSPRSSLESA 191
           + G         N  + W        G+  +  +N     Y     NNP VSP+SSLE +
Sbjct: 123 AAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNP-VSPQSSLEES 182

Query: 192 ANNDEA----LLFINNQNHLHESQSRSPEESQFLQPFPIKKLPSSH--ADLGELQALALR 234
            +N  +       +   +H         +   F + +P KK   S+  +DLGELQALALR
Sbjct: 183 FSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALR 242

BLAST of CaUC07G125930 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 7.1e-42
Identity = 85/110 (77.27%), Postives = 93/110 (84.55%), Query Frame = 0

Query: 17  SGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVH 76
           SGGG G PCGACKFLRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSKLLLH+PVH
Sbjct: 30  SGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVH 89

Query: 77  DRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 127
            R +AVVTI YEAQARI DP+YGCVAHIFALQQQV  LQ ++   +A LA
Sbjct: 90  RRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

BLAST of CaUC07G125930 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.5e-41
Identity = 84/108 (77.78%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 20  GSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 79
           G GSPCGACKFLRRKCV  C+FAPYFC EQGAA FAAIHKVFGASNVSKLL H+P+ DR 
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 80  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQ 128
           EA VTI+YEAQAR+ DP+YGCVAHIFALQQQV  LQ QL   KA  AQ
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

BLAST of CaUC07G125930 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.0e-41
Identity = 80/117 (68.38%), Postives = 95/117 (81.20%), Query Frame = 0

Query: 14  VSGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHV 73
           ++ S   SGSPCGACKFLRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+
Sbjct: 1   MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL 60

Query: 74  PVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLM 131
           P+ DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q AQ+++
Sbjct: 61  PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMI 117

BLAST of CaUC07G125930 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.3e-39
Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 0

Query: 20  GSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 79
           GSGSPCGACKFLRR+CV  C+FAPYFC EQGA+ FAAIH+VFGASN SKLL H+P+ DR 
Sbjct: 3   GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRR 62

Query: 80  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLM 131
           EA  TI YEAQAR  DP+YGCV+HIF+LQQQV  LQTQL   K Q  Q++M
Sbjct: 63  EAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

BLAST of CaUC07G125930 vs. ExPASy TrEMBL
Match: A0A5D3C536 (LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00040 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.5e-98
Identity = 207/237 (87.34%), Postives = 213/237 (89.87%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSG--GGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV 62
           +SSSS+S NTSVSG G  GG GSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV
Sbjct: 2   ASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV 61

Query: 63  FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ 122
           FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ
Sbjct: 62  FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ 121

Query: 123 AKAQLAQTLMDSGGNMEIQWTGNFNN-NLFNG-IP-NNYQTQIMNNPAVSPRSSLESAAN 182
           AKAQLAQTLMDSG NMEIQWTG+FNN NL NG IP NNYQTQIMNNP  +P+SSLESAAN
Sbjct: 122 AKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP--TPQSSLESAAN 181

Query: 183 NDEALLFINNQNHLHESQ-SRSPEESQFLQPFPIKKLPSSHADLGELQALALRMMRN 234
           NDEALLFIN     HESQ SRS +E Q LQPFP KKL SSHADLGEL ALALRMMRN
Sbjct: 182 NDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of CaUC07G125930 vs. ExPASy TrEMBL
Match: A0A1S3CG76 (LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.5e-98
Identity = 207/237 (87.34%), Postives = 213/237 (89.87%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSG--GGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV 62
           +SSSS+S NTSVSG G  GG GSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV
Sbjct: 2   ASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKV 61

Query: 63  FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ 122
           FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ
Sbjct: 62  FGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQ 121

Query: 123 AKAQLAQTLMDSGGNMEIQWTGNFNN-NLFNG-IP-NNYQTQIMNNPAVSPRSSLESAAN 182
           AKAQLAQTLMDSG NMEIQWTG+FNN NL NG IP NNYQTQIMNNP  +P+SSLESAAN
Sbjct: 122 AKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP--TPQSSLESAAN 181

Query: 183 NDEALLFINNQNHLHESQ-SRSPEESQFLQPFPIKKLPSSHADLGELQALALRMMRN 234
           NDEALLFIN     HESQ SRS +E Q LQPFP KKL SSHADLGEL ALALRMMRN
Sbjct: 182 NDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of CaUC07G125930 vs. ExPASy TrEMBL
Match: A0A0A0LAE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97
Identity = 207/242 (85.54%), Postives = 214/242 (88.43%), Query Frame = 0

Query: 3   SSSSSSSANTSV------SGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 62
           +SSSS+S NTS+      SGSGGG GSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA
Sbjct: 2   ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 61

Query: 63  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 122
           IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT
Sbjct: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121

Query: 123 QLMQAKAQLAQTLMDSGGNMEIQWTGNF-NNNLFNG-IP-NNYQTQIMNNPAVSPRSSLE 182
           QLM AKAQLA+TLMDSG NMEIQWTG+F NNNL NG IP NNYQTQI NNP  SP+SSLE
Sbjct: 122 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP--SPQSSLE 181

Query: 183 SAANNDEALLFINNQNHLHESQ-SRSPEESQFLQPFPIKKLP-SSHADLGELQALALRMM 234
           SAANNDEALLFIN     HESQ SRS +E QFLQPFP KKLP SSHADLGEL ALALRMM
Sbjct: 182 SAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMM 241

BLAST of CaUC07G125930 vs. ExPASy TrEMBL
Match: A0A6J1HWM7 (LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111466950 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.8e-88
Identity = 186/239 (77.82%), Postives = 201/239 (84.10%), Query Frame = 0

Query: 2   ASSSSSSSANTSVS-------GSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARF 61
           +SSSSSS+AN+SVS       G GGG GSPCGACKFLRRKCVA+CIFAPYF SEQGAARF
Sbjct: 3   SSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARF 62

Query: 62  AAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYL 121
           AA+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYL
Sbjct: 63  AAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYL 122

Query: 122 QTQLMQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPRSSLES 181
           Q QLMQAKAQLAQTLMDSGGNME+QWTG+FNNNL NGIP+NY+TQIM NPAVSP+SS+ES
Sbjct: 123 QAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIM-NPAVSPQSSVES 182

Query: 182 AANNDEALLFINNQNHLHESQSRSPEESQFLQPFPIKKLPSSHADLGELQALALRMMRN 234
           AANND AL+F+   NH  ESQ+ +   S            S H DLGELQALALRMMRN
Sbjct: 183 AANNDAALMFM---NHYQESQTLARRRS-----------ASCHGDLGELQALALRMMRN 226

BLAST of CaUC07G125930 vs. ExPASy TrEMBL
Match: A0A6J1HIG3 (LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463903 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.8e-85
Identity = 182/235 (77.45%), Postives = 197/235 (83.83%), Query Frame = 0

Query: 2   ASSSSSSSANTSVS---GSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 61
           +SSSSSS+AN+SVS   G GGG GSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA+H
Sbjct: 3   SSSSSSSTANSSVSGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVH 62

Query: 62  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 121
           KVFGASNVSKLL HVP HDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ QL
Sbjct: 63  KVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVACLQAQL 122

Query: 122 MQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPRSSLESAANN 181
           MQAKAQLAQTLM+SGGNME+QWTG+FNNNL NGIP+NY+TQIM NPAVSP+SS+ESAANN
Sbjct: 123 MQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIM-NPAVSPQSSVESAANN 182

Query: 182 DEALLFINNQNHLHESQSRSPEESQFLQPFPIKKLPSSHADLGELQALALRMMRN 234
           D AL+F+   NH  ESQ+     S            S H DLGELQALALRMMRN
Sbjct: 183 DAALMFM---NHYQESQTLGRRRS-----------ASCHGDLGELQALALRMMRN 222

BLAST of CaUC07G125930 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 216.5 bits (550), Expect = 2.3e-56
Identity = 133/244 (54.51%), Postives = 163/244 (66.80%), Query Frame = 0

Query: 12  TSVSGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLL 71
           +S +G+  G+GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL
Sbjct: 3   SSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLL 62

Query: 72  HVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMD 131
           +VP+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A     
Sbjct: 63  NVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTS 122

Query: 132 SGG---------NMEIQW-------TGNFNNNLFNGIPNNYQTQIMNNPAVSPRSSLESA 191
           + G         N  + W        G+  +  +N     Y     NNP VSP+SSLE +
Sbjct: 123 AAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNP-VSPQSSLEES 182

Query: 192 ANNDEA----LLFINNQNHLHESQSRSPEESQFLQPFPIKKLPSSH--ADLGELQALALR 234
            +N  +       +   +H         +   F + +P KK   S+  +DLGELQALALR
Sbjct: 183 FSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALR 242

BLAST of CaUC07G125930 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 172.2 bits (435), Expect = 5.0e-43
Identity = 85/110 (77.27%), Postives = 93/110 (84.55%), Query Frame = 0

Query: 17  SGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVH 76
           SGGG G PCGACKFLRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSKLLLH+PVH
Sbjct: 30  SGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVH 89

Query: 77  DRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 127
            R +AVVTI YEAQARI DP+YGCVAHIFALQQQV  LQ ++   +A LA
Sbjct: 90  RRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

BLAST of CaUC07G125930 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 169.1 bits (427), Expect = 4.2e-42
Identity = 80/117 (68.38%), Postives = 95/117 (81.20%), Query Frame = 0

Query: 14  VSGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHV 73
           ++ S   SGSPCGACKFLRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+
Sbjct: 1   MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL 60

Query: 74  PVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLM 131
           P+ DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q AQ+++
Sbjct: 61  PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMI 117

BLAST of CaUC07G125930 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 162.9 bits (411), Expect = 3.0e-40
Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 0

Query: 20  GSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 79
           GSGSPCGACKFLRR+CV  C+FAPYFC EQGA+ FAAIH+VFGASN SKLL H+P+ DR 
Sbjct: 3   GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRR 62

Query: 80  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLM 131
           EA  TI YEAQAR  DP+YGCV+HIF+LQQQV  LQTQL   K Q  Q++M
Sbjct: 63  EAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

BLAST of CaUC07G125930 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-40
Identity = 86/120 (71.67%), Postives = 96/120 (80.00%), Query Frame = 0

Query: 7   SSSANTSVSGSGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNV 66
           SSS N   S S GG G PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNV
Sbjct: 2   SSSGNP--SSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNV 61

Query: 67  SKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 126
           SKLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L   +A LA
Sbjct: 62  SKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038888851.11.4e-10389.63LOB domain-containing protein 16-like [Benincasa hispida][more]
XP_008461877.15.1e-9887.34PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domai... [more]
KAE8650674.19.6e-9785.54hypothetical protein Csa_009642 [Cucumis sativus][more]
XP_004152037.29.6e-9785.54LOB domain-containing protein 16 [Cucumis sativus][more]
XP_022967414.11.4e-8777.82LOB domain-containing protein 16-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9SLB73.3e-5554.51LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S... [more]
O221317.1e-4277.27LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S... [more]
Q5UG133.5e-4177.78LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C... [more]
Q9M2J76.0e-4168.38LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S... [more]
Q9SLB64.3e-3971.17LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A5D3C5362.5e-9887.34LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CG762.5e-9887.34LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV... [more]
A0A0A0LAE84.7e-9785.54LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV... [more]
A0A6J1HWM76.8e-8877.82LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC11146695... [more]
A0A6J1HIG31.8e-8577.45LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463... [more]
Match NameE-valueIdentityDescription
AT2G42430.12.3e-5654.51lateral organ boundaries-domain 16 [more]
AT2G45420.15.0e-4377.27LOB domain-containing protein 18 [more]
AT3G58190.14.2e-4268.38lateral organ boundaries-domain 29 [more]
AT2G42440.13.0e-4071.17Lateral organ boundaries (LOB) domain family protein [more]
AT4G00220.15.2e-4071.67Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 24..122
e-value: 2.6E-36
score: 124.2
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 23..125
score: 22.677494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR31529LOB DOMAIN CONTAINING PROTEINcoord: 17..232
NoneNo IPR availablePANTHERPTHR31529:SF23LOB DOMAIN-CONTAINING PROTEIN 16coord: 17..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC07G125930.1CaUC07G125930.1mRNA