CaUC06G124100 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAGAACGATGGAACCGCGAGTCCCGACTGGCCGACGGGGATTATCTGGATTCTTAATCCGAATAATGAATTTTCAGATTCTGGATAATGATAATCCTCGTGGGAGTTAGGGATATAGGCGTTGGATAAGCCTTTGGACATTCTCCTCACTCCCGTTTCTGTACACAGCATAATAATGGAAGCTCTGGCGCTTCCTTCCCTGAATTCACTCCCCATTTCTTGTTCTAATTTGAAGAAACGAGGTTTTGCCAACTACCCCAGAAGATTGCATCACTGTAAATTTTACCATCAATCCACCTTCAAGTTCAATGGTACCAACCGCTCTGTACGTAATTCTATACCCTTTTTTTCAATTTTGGTAGTATTTGATTCTTTAGTATGTTTGCTGATTTTATTTCCTTACATGATCTGTTTGTTTCTGTATGTCAATGTTTTGCTCAGCATTTCAATGTTATCAAAATGCAAAGTGATAGTGATGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGACTCTCTGGTTGGTACCCACCCTTTATTTTGTAATTGTATTTCTTTTTTGTGAATGTTTTTTTGATCATATTAACTACAGGATCTAAATTCTTTTATTTGCTAGCTCAACCTAATCTAAATCACACTTCTGAATTATACCAGTTGGTTGAAAATAAGTATGGTAGTGACTTCAATCAGTACTACCAGACAGATTCAATTTGATACGACTAATTGGTCTTTTGAGTGTATATGTGTTAGTTACTCAATATTTATTATTAGATAAAATCTACCTCTCTTTGTAACAATTATTTTGGATTTGATCCAACTTAATTTGGAAATCAACAAGTAACATGAATGTTCAGTATGTCCGGATGGTTTAGTCATACTCTCTGAGGGTGAATTCTTCAATTGCATTGTTTCTTGGTTGCATTCTTTAAAATTTTAAATTGTTAATAGATGTGTGCTGTTTAATGTTTACTACTCATTTATATTTATAGATCCGAGAAGGCAAAGTGAAAGTTCTGATGCCAAGGGAAGCTGGTTATGCCATTCAGCTCTCTGATAAGACATTGCTTGATGTGCGTCCTTCTACAGAACACAAAAAGGTAGAGTACTGAATTGTCTGTGATGAAAAATCTCACTGCATGGATCCTTGGAAGTTCTTTTTACTGATTGATGCTTGCAGTAGAGGCCACATGAAAAAGTAAAGATTTAATCTTCGTCTTGTGTTTCCTGGTGATACATGTGTAATTGGCTCTTAGGGGGCCTCAATAGTGGTAGATTCTATTGTTGAAAGGGTAGTCCATGCCATGCTTAGTAATTTTAGAGGCACATGCGAACTAGTTCTTAGTGCAAAAATGTTGATATGGCTTTTCCTAACCTTCACTAGCTATCTAGGGATTTTATGACCAACACATCTTCGTATTTATTCATTGTTGGACTCTTGAACTTATGTTTCTCCCATGTTTTGAAGGCATGGGTTAAAGGCTCAACATGGATCCCTATCTTTGATGTTGATGACAAACTTGATCCTGGAACTCTTTCTCGAAAAGTCACAAGCTTCATGATGGGTACCAAAGCTTTTGCTATCTCTTCTTTAAAGACCAAAGTCTAGTTCTCTGGTTGTCATCTTTTGCAGGCTTTTCCATTCAGATACCCACAAATTTCTTTACTTAATTTTCTTCTTGAGATTGCTAGTCAGATTAGTGAATCATATAAAGTAATGAGTATTATCGACCATGAAATTAGTTGAAGTTTTACTTTTTATTTTTTGTCAAGTTATTTAATTTTGGCAGTTAGTCCCTTACATCGATCTTATGTGTGCCTAGGGGGTTGGTGGAGTGGGGTGCCTACAGTATCCTACAACAGGTATAATGCGGGCCATAGCAATTCTTCTGGTTCTTTTTGTTAATTTGTGTAATCCATATTTATTTTTTTCGCTGCCTGTACTTCAACAGCCGATTCTTGACAGAAGTTCAAGAGAAGTTTCCAAAAGATGCTGACCTTATTCTTGCATGCCAAAAGGGATTGAGGTAATCTCCTGATTTTGATGGGCTAAGATGAAACATTTTTAAATAATCAATGCTGAGTTGTAAACTGTGGTTGCAACTTGGGCTAAAATGAAATGAATTTTGACTTTCCATAACTCTTGATCATGACTTCCATGTAACAAGTGAAGGAAAAATTGCTCAGTTAACTATAGTTGCAACAAAGTATACTTATCCCAGCAACAAGCAGGGGATTAAAATTATGATAAAACATCTTGCTGAGTCAAAGGATTGCACCAAATTATTATTTTACATGAAATCATTCGACTAAATTATCTTCTAGGATATCTCACATCCAACGTTGACTAATATTAACACTGAAAAAAATTACAATAGTGTGATGTTAGTTTTTTTTTTGGTATCAGATTATCACTAAAAGAATCAAAACAATGATATTGTTAATTACTTCAAAAGATCCAATTGTAAGGAATTTATAACCTTGGCCGGGCTTCTTTCATCTGAACAACATTTCTGGAAGGTCCCTAGCTGCATGCGAACTCCTCTACAATGCTGGTTATAGAAACCTTTTCTGGATTCAAGGCGGTCTAGATGCTGCTGAAGAAGAGGTATCTATATTTTTACTTCAAAATTTCTGCATCCTCTCTGTTTATGCTTCCTGGTGTCTCTGGTTTCTTTGCTGTTAATCCAGTCTCAGTCTGTAAAAGTAAAATTTGGTCATGTCTATTATTTTGCTTGGAACAGGATCTTGTCAGAGAAGGTCCTCAGCCCTTAAAATTCGCTGGGATTGGTGGGCTTTCAGAATTCCTTGGGTAAAAGCTGATTTTAACCTGTTTTCTCCTTATATCCATTTTGTATGCTCATGGCACTCCAACTCCAGGCTATAAATCACTAATTTGCAAGCAACCTACTTCTGTCTCACTCCTTTGCTCAATATGCAAAAATAGTCAATACATTATAGATAAACGCATTTTGCATAATCCTAGACAATGCCTGGGAATAGCGTTCAGTGTGATTACTTGAGAATAACCAAAATTTCTTATTCCATGAATTTACCTTAGAATGAATCTCTCAATTATATACCCTTAACTATGAAGTTTTTTGGTAGGGATAGTGATGCTATTTGTTTTAAAGGGCAAAAGAGGACATTTCAAATAAATCTAATTTACTTTGAAAGTGCCTACTTCCTATCCTCTGACTCACTTCCCATATGAGTTTCAGTTGGACAGATCAACAAAGGGTGGCTGGTGCAAAAGAAGGTTGGGGTTATCGCTTGGTTTACTCTGCTCGTCTGGTAATATTTCATATAGACGTATTTGTTAACTGGTTCCCAGCTCCATCTTAAACTTCTCTCCTTCAGCCCCGGGTTCAATTTTTCTGGCACAGGTTGCAGTCTTTCTTGCTGCTGATGTCCTGTTTATCGGCGCTCAGCAATTGGGTCATTATATTCAGGAATTACGGTCTCACTAAAGATCACTGCCCGGGGTTTGTGTAGTAGGATGAAAGACATTTGAGACTAAGGTCTGAAGTTTTGTCTAGAGTAGTGAGTCCTGTGTGATGGGGATCCTTGGAATTAATAATATGTGTAGGGTTGTATATTCTTGAGTCCAGTTCTCATTTTTGAGCTAGACTACCCATTTTGTAGTACTAGGGAAGAAGTAGAGATTCCACCTGAAGAAGTTCATGAGGAGTGAAGAATGGCATGTTATTGTATGTAACTCTGGGCGTTTCTACTTCACAATATAATTTGCTTGTATTGCATGCTTCA GGCAGAACGATGGAACCGCGAGTCCCGACTGGCCGACGGGGATTATCTGGATTCTTAATCCGAATAATGAATTTTCAGATTCTGGATAATGATAATCCTCGTGGGAGTTAGGGATATAGGCGTTGGATAAGCCTTTGGACATTCTCCTCACTCCCGTTTCTGTACACAGCATAATAATGGAAGCTCTGGCGCTTCCTTCCCTGAATTCACTCCCCATTTCTTGTTCTAATTTGAAGAAACGAGGTTTTGCCAACTACCCCAGAAGATTGCATCACTGTAAATTTTACCATCAATCCACCTTCAAGTTCAATGGTACCAACCGCTCTCATTTCAATGTTATCAAAATGCAAAGTGATAGTGATGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGACTCTCTGATCCGAGAAGGCAAAGTGAAAGTTCTGATGCCAAGGGAAGCTGGTTATGCCATTCAGCTCTCTGATAAGACATTGCTTGATGTGCGTCCTTCTACAGAACACAAAAAGGCATGGGTTAAAGGCTCAACATGGATCCCTATCTTTGATGTTGATGACAAACTTGATCCTGGAACTCTTTCTCGAAAAGTCACAAGCTTCATGATGGTTAGTCCCTTACATCGATCTTATGTGTGCCTAGGGGGTTGGTGGAGTGGGGTGCCTACAGTATCCTACAACAGCCGATTCTTGACAGAAGTTCAAGAGAAGTTTCCAAAAGATGCTGACCTTATTCTTGCATGCCAAAAGGGATTGAGGTCCCTAGCTGCATGCGAACTCCTCTACAATGCTGGTTATAGAAACCTTTTCTGGATTCAAGGCGGTCTAGATGCTGCTGAAGAAGAGGATCTTGTCAGAGAAGGTCCTCAGCCCTTAAAATTCGCTGGGATTGGTGGGCTTTCAGAATTCCTTGGTTGGACAGATCAACAAAGGGTGGCTGGTGCAAAAGAAGGTTGGGGTTATCGCTTGGTTTACTCTGCTCGTCTGGTTGCAGTCTTTCTTGCTGCTGATGTCCTGTTTATCGGCGCTCAGCAATTGGGTCATTATATTCAGGAATTACGGTCTCACTAAAGATCACTGCCCGGGGTTTGTGTAGTAGGATGAAAGACATTTGAGACTAAGGTCTGAAGTTTTGTCTAGAGTAGTGAGTCCTGTGTGATGGGGATCCTTGGAATTAATAATATGTGTAGGGTTGTATATTCTTGAGTCCAGTTCTCATTTTTGAGCTAGACTACCCATTTTGTAGTACTAGGGAAGAAGTAGAGATTCCACCTGAAGAAGTTCATGAGGAGTGAAGAATGGCATGTTATTGTATGTAACTCTGGGCGTTTCTACTTCACAATATAATTTGCTTGTATTGCATGCTTCA ATGGAAGCTCTGGCGCTTCCTTCCCTGAATTCACTCCCCATTTCTTGTTCTAATTTGAAGAAACGAGGTTTTGCCAACTACCCCAGAAGATTGCATCACTGTAAATTTTACCATCAATCCACCTTCAAGTTCAATGGTACCAACCGCTCTCATTTCAATGTTATCAAAATGCAAAGTGATAGTGATGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGACTCTCTGATCCGAGAAGGCAAAGTGAAAGTTCTGATGCCAAGGGAAGCTGGTTATGCCATTCAGCTCTCTGATAAGACATTGCTTGATGTGCGTCCTTCTACAGAACACAAAAAGGCATGGGTTAAAGGCTCAACATGGATCCCTATCTTTGATGTTGATGACAAACTTGATCCTGGAACTCTTTCTCGAAAAGTCACAAGCTTCATGATGGTTAGTCCCTTACATCGATCTTATGTGTGCCTAGGGGGTTGGTGGAGTGGGGTGCCTACAGTATCCTACAACAGCCGATTCTTGACAGAAGTTCAAGAGAAGTTTCCAAAAGATGCTGACCTTATTCTTGCATGCCAAAAGGGATTGAGGTCCCTAGCTGCATGCGAACTCCTCTACAATGCTGGTTATAGAAACCTTTTCTGGATTCAAGGCGGTCTAGATGCTGCTGAAGAAGAGGATCTTGTCAGAGAAGGTCCTCAGCCCTTAAAATTCGCTGGGATTGGTGGGCTTTCAGAATTCCTTGGTTGGACAGATCAACAAAGGGTGGCTGGTGCAAAAGAAGGTTGGGGTTATCGCTTGGTTTACTCTGCTCGTCTGGTTGCAGTCTTTCTTGCTGCTGATGTCCTGTTTATCGGCGCTCAGCAATTGGGTCATTATATTCAGGAATTACGGTCTCACTAA MEALALPSLNSLPISCSNLKKRGFANYPRRLHHCKFYHQSTFKFNGTNRSHFNVIKMQSDSDDYELKQMRDMAAAKKRWDSLIREGKVKVLMPREAGYAIQLSDKTLLDVRPSTEHKKAWVKGSTWIPIFDVDDKLDPGTLSRKVTSFMMVSPLHRSYVCLGGWWSGVPTVSYNSRFLTEVQEKFPKDADLILACQKGLRSLAACELLYNAGYRNLFWIQGGLDAAEEEDLVREGPQPLKFAGIGGLSEFLGWTDQQRVAGAKEGWGYRLVYSARLVAVFLAADVLFIGAQQLGHYIQELRSH Homology
BLAST of CaUC06G124100 vs. NCBI nr
Match: XP_038880012.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 550.4 bits (1417), Expect = 9.4e-153 Identity = 271/303 (89.44%), Postives = 280/303 (92.41%), Query Frame = 0
BLAST of CaUC06G124100 vs. NCBI nr
Match: XP_008464502.1 (PREDICTED: rhodanese-like domain-containing protein 11, chloroplastic [Cucumis melo] >TYJ98495.1 rhodanese-like domain-containing protein 11 [Cucumis melo var. makuwa]) HSP 1 Score: 538.1 bits (1385), Expect = 4.9e-149 Identity = 263/306 (85.95%), Postives = 279/306 (91.18%), Query Frame = 0
BLAST of CaUC06G124100 vs. NCBI nr
Match: KAG6589413.1 (Rhodanese-like domain-containing protein 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 530.8 bits (1366), Expect = 7.7e-147 Identity = 264/306 (86.27%), Postives = 278/306 (90.85%), Query Frame = 0
BLAST of CaUC06G124100 vs. NCBI nr
Match: XP_004138081.1 (rhodanese-like domain-containing protein 11, chloroplastic [Cucumis sativus] >KGN63524.1 hypothetical protein Csa_013726 [Cucumis sativus]) HSP 1 Score: 530.4 bits (1365), Expect = 1.0e-146 Identity = 261/306 (85.29%), Postives = 276/306 (90.20%), Query Frame = 0
BLAST of CaUC06G124100 vs. NCBI nr
Match: XP_022921793.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 530.0 bits (1364), Expect = 1.3e-146 Identity = 263/306 (85.95%), Postives = 275/306 (89.87%), Query Frame = 0
BLAST of CaUC06G124100 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-108 Identity = 195/303 (64.36%), Postives = 229/303 (75.58%), Query Frame = 0
BLAST of CaUC06G124100 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.9e-24 Identity = 66/172 (38.37%), Postives = 93/172 (54.07%), Query Frame = 0
BLAST of CaUC06G124100 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 0
BLAST of CaUC06G124100 vs. ExPASy TrEMBL
Match: A0A5D3BJF1 (Rhodanese-like domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00970 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 2.3e-149 Identity = 263/306 (85.95%), Postives = 279/306 (91.18%), Query Frame = 0
BLAST of CaUC06G124100 vs. ExPASy TrEMBL
Match: A0A1S3CN59 (rhodanese-like domain-containing protein 11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502364 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 2.3e-149 Identity = 263/306 (85.95%), Postives = 279/306 (91.18%), Query Frame = 0
BLAST of CaUC06G124100 vs. ExPASy TrEMBL
Match: A0A0A0LRC9 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002930 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 4.9e-147 Identity = 261/306 (85.29%), Postives = 276/306 (90.20%), Query Frame = 0
BLAST of CaUC06G124100 vs. ExPASy TrEMBL
Match: A0A6J1E4U4 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429939 PE=4 SV=1) HSP 1 Score: 530.0 bits (1364), Expect = 6.4e-147 Identity = 263/306 (85.95%), Postives = 275/306 (89.87%), Query Frame = 0
BLAST of CaUC06G124100 vs. ExPASy TrEMBL
Match: A0A6J1E1J7 (rhodanese-like domain-containing protein 11, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429939 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 1.9e-146 Identity = 264/306 (86.27%), Postives = 277/306 (90.52%), Query Frame = 0
BLAST of CaUC06G124100 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 393.7 bits (1010), Expect = 1.4e-109 Identity = 195/303 (64.36%), Postives = 229/303 (75.58%), Query Frame = 0
BLAST of CaUC06G124100 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 113.6 bits (283), Expect = 2.8e-25 Identity = 66/172 (38.37%), Postives = 93/172 (54.07%), Query Frame = 0
BLAST of CaUC06G124100 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-17 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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