CaUC06G122770 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G122770
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	HNH domain-containing protein
Location	Ciama_Chr06: 27848481 .. 27851725 (+)
RNA-Seq Expression	CaUC06G122770
Synteny	CaUC06G122770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACAAAGAAGGGCGACTTCCCATTATTACCTCTAAAATTATCCACGAACGAGCCAAAGATGAGGCGTAGCAAAGAATCGAAGAAGAAAACTCGCCCATCATCACCGCTCAGGGACCGAACCGGTGCTTCTACGAGGCTCGAATCGAGGCGTTATGGGTCTAGCCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACTGGCGAATCCAATCTCCTCGGAGACCTAAAACTCTCTCCCGATGATCGAGTTTCCGACTACAATCCCCGGAGCTTTCCTCACAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACGTCGTTTTTCGAAAGCTTGTTGGCTGCCCTGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGTAGTTGCCCTTTGCAGATTCTTCTATTTTACCCCATTTGTTTCTTTGTTATTCCTCTTTTTTAGTATGGGGCTGGATTTTTGTTTGGTTCTTGTAATTCAGGCTGTAGGATGGAAATGAACAATAACTCTTTATAGTATTCTTCGAATTCTACTTCTGTGTGTGCGCTCTTGATTTTGTTTATTTGAGTTCAACAATCTTGGTCGAAGTTGGCTTGGTGGGTTCTTCTTCTTTGTACATTATGGATTTGCCTGTAATTTTTAATGTATTGTGACTTGAAAATCTTTAATTTCCATTTCTACTTAGACTATCACATGTATATTTAGTCAGTTGTTTTCAATTACAGTACTGGATATTTGATGTTTGTAAATGGTTGTGGAATTGTGTTATAATTTTCTCTTCTATCTGTCCCAGAAGATTTATGCACAAATATTGCTTTCACGCTTATTCCTTCCTATACCAATTGGTTTAAGTTGATGCGAATGGAAGCTTAGTATGAGCAACTAAACGTGTTAAGAAATAAATGAACTGATGAAATGAAAATTTAGTTTGGATACAGTCAATTATCAGTAAGGTCGGACTTTTTGTGACATTGGAATTATCAAGGAGGTTTGGGATTTCCTCATCCAAATTGAATCTGAATATGCCAATAGTCATCCCTTTAGTTTCATTTTTTTTATTTGCTGAAATGTTGAGTATGAGATTCTGAGATTCTACTTATTAAGAAGTCATCTTTGGCATATTTATTTCTTTCTAAATTCAGTTACTGCTCACTCGTTACTCTTGAGGCTGAGTTTGAATATTTCATATTGCAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGTAATGGTCCTAATGACTTTCCTTTGTGCCATCCAAACTTCATTTAGTACCTTACTTTACCTTCGCTTAGTTTAGGCTGTTTTTCGAAGATACGAGGCATTATTCCTTCAAACTAATAGGATGAAGAGGATTATAGAGGACAGAACTCCCTGCTATTCTGTTTGCTAAACAATATGTCTTCCAGGACCCGATACTGTTACATAGAAGTTCTTAATGCTTCACTGACTGTGCTTATGAGTTATGACTGCCTTTTTGATAATTGCATTCTCCCTCTATCAACCTTTTTCCTTTGAAGTACTGAAGGATAAAAACTGTTATCTCAGTTAGCTGATCATCGTTTATTGTGTTCTTCTTTAACCTGGGATTCTAGAGTTTACCATAGTAATTTACTTGCTAGATTATAGTTGAAATTATTTATTCAGATTTTTCTATCCATCATGTGTAGGACATTACATTTTTTTTTTTTTTTTTCTAAACCTAGAGTGTTTGGTACTTCGGAAACAAATAAGATATTTTAAAAAAACAAATAAAAATGGCTTTTGAAATAATCATTTCGCTCTAAAATCACTTTTTGGAGAATCATTTTAAATTTGATTATTTGAATGGTGCTTCTTAAGTGACTCAATCACTTTAGAATCATTTTACTGCAGTTTGGTATTTGTAGAATCACTTTAAGATATAGGGCAACCAAACAAACTTGATTAAAAATCACTTTTTAAGTAAATGTAACCACACACTAGAATTTTAATTAAAATTGTTTTTATTAAAAGTGTGTTGAGAAAATATAGTTGTAGAAAAAATGTTTAAATTAGAAGGTATGCCAAACTCACCCTTAAAAGTGTTTATATTACCTTTTGAATATCATTGCCAATGCTAGGAGTTAGTTTATTGTTTTTGGGGGGTTGCATCACCATTCCTATATTTCATAATAGTTTAAATTATTTTGTTTGTGATTAATTTTCAATTAATTGGTTTCAATATTCGAAAGAAAGAATTCGCCCAAATCCATACTCCCACCATCTTCTTATATTTTTTCTTGTTGTTTAGCAATTAGCATATTACGTTTTGATTATTATCTTCTGATGGCTGTAATCTTGACGATGTAGGCAACTGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTAGACTAACTTTCTTAAACAACAATATATTAGGGTATTTACTTACACCTTGGTAGTGATATGATACGGTCGATGTGTGTACATAATATACAGGTCGAGACATGGATCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGGTGTAGAATTCAATGACTAATTGAATGATAATATTATAACCTGTAGTAGAATTGATTCCAGTGTGAGACGTGGAAACTTAACAAAAAAAAAAGAAAAAACCAAAAAGATTGAAACGAAAGAAGTAGGGAATTATCCCCATGTTCTTATTTCATTCCTTTATAGATCGAGTACGTGTATGTATTGTTTATGCGAACAAGCTCATTGGTTGCATACAGTATCATGTAGAAGCATTGCTTTATGCCTTCATGTCTGATCTGATGTGTGTAGAACCTATGATAGAAGGGGTTACAGTTCAAAAGAAAGATTTTATCATATTGGAAAGGAAAGAATTGAAAGAAAAAGCATGAAATGGAAGTGTATGAGCAAGTTGTGAACACATTTGTAAAGTTAAAATTCTTACCAATCCATCCCCACTATCAGGCAGTAGAGAAATTGGATGTTCCTTTCTTCTTTTTCTTTGCGTTATAGGGAAGTGATGCTTCACATCCACACTTTCTTGTGGATGCTTTTTGAAACAAAAGAATTTTTACCTACTTCGGTTCAATCAAATGTGACAGCAACAGGAAGAAACTGGGCCATTAAGT

mRNA sequence

TAACAAAGAAGGGCGACTTCCCATTATTACCTCTAAAATTATCCACGAACGAGCCAAAGATGAGGCGTAGCAAAGAATCGAAGAAGAAAACTCGCCCATCATCACCGCTCAGGGACCGAACCGGTGCTTCTACGAGGCTCGAATCGAGGCGTTATGGGTCTAGCCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACTGGCGAATCCAATCTCCTCGGAGACCTAAAACTCTCTCCCGATGATCGAGTTTCCGACTACAATCCCCGGAGCTTTCCTCACAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACGTCGTTTTTCGAAAGCTTGTTGGCTGCCCTGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGGTGTAGAATTCAATGACTAATTGAATGATAATATTATAACCTGTAGTAGAATTGATTCCAGTGTGAGACGTGGAAACTTAACAAAAAAAAAAGAAAAAACCAAAAAGATTGAAACGAAAGAAGTAGGGAATTATCCCCATGTTCTTATTTCATTCCTTTATAGATCGAGTACGTGTATGTATTGTTTATGCGAACAAGCTCATTGGTTGCATACAGTATCATGTAGAAGCATTGCTTTATGCCTTCATGTCTGATCTGATGTGTGTAGAACCTATGATAGAAGGGGTTACAGTTCAAAAGAAAGATTTTATCATATTGGAAAGGAAAGAATTGAAAGAAAAAGCATGAAATGGAAGTGTATGAGCAAGTTGTGAACACATTTGTAAAGTTAAAATTCTTACCAATCCATCCCCACTATCAGGCAGTAGAGAAATTGGATGTTCCTTTCTTCTTTTTCTTTGCGTTATAGGGAAGTGATGCTTCACATCCACACTTTCTTGTGGATGCTTTTTGAAACAAAAGAATTTTTACCTACTTCGGTTCAATCAAATGTGACAGCAACAGGAAGAAACTGGGCCATTAAGT

Coding sequence (CDS)

ATGAGGCGTAGCAAAGAATCGAAGAAGAAAACTCGCCCATCATCACCGCTCAGGGACCGAACCGGTGCTTCTACGAGGCTCGAATCGAGGCGTTATGGGTCTAGCCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTGGACCGGGACCTCGTCACTGGCGAATCCAATCTCCTCGGAGACCTAAAACTCTCTCCCGATGATCGAGTTTCCGACTACAATCCCCGGAGCTTTCCTCACAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACGTCGTTTTTCGAAAGCTTGTTGGCTGCCCTGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGGTGTAGAATTCAATGA

Protein sequence

MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

Homology

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BLAST of CaUC06G122770 vs. NCBI nr
Match: XP_008453210.1 (PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 191/200 (95.50%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGA T LES RYGS PSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LK SP+D VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

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BLAST of CaUC06G122770 vs. NCBI nr
Match: XP_004138170.1 (uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical protein Csa_013308 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 5.9e-103
Identity = 190/200 (95.00%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+ T LESR YGS PSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LK SPDD VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

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BLAST of CaUC06G122770 vs. NCBI nr
Match: XP_038880609.1 (uncharacterized protein LOC120072255 [Benincasa hispida])

HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102
Identity = 188/200 (94.00%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MRR+KESKKKTR SSPLRDRTG  T LESRRYGS+PSSLSPSASLLDRDL+TGE++LLGD
Sbjct: 1   MRRNKESKKKTRSSSPLRDRTGDPTSLESRRYGSNPSSLSPSASLLDRDLITGEASLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LKLSPDD VSDYNPRSFPHSVKQQCWDKAEKIKGRDP RWRRDALGN+VFRKLVGCPGCL
Sbjct: 61  LKLSPDDLVSDYNPRSFPHSVKQQCWDKAEKIKGRDPSRWRRDALGNIVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of CaUC06G122770 vs. NCBI nr
Match: XP_022972967.1 (uncharacterized protein LOC111471489 [Cucurbita maxima])

HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100
Identity = 185/200 (92.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT  STR ESRR+GS+ S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LKLSPDD VSDYNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of CaUC06G122770 vs. NCBI nr
Match: XP_023529236.1 (uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.1 bits (954), Expect = 3.0e-99
Identity = 184/200 (92.00%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT  STR ESRR+GS  S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LKLSPD  VSDYNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of CaUC06G122770 vs. ExPASy TrEMBL
Match: A0A5A7US43 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002510 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.8e-104
Identity = 191/200 (95.50%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGA T LES RYGS PSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LK SP+D VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of CaUC06G122770 vs. ExPASy TrEMBL
Match: A0A1S3BWU4 (uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.8e-104
Identity = 191/200 (95.50%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTGA T LES RYGS PSSLSPSASLLDRDLVTGESNLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LK SP+D VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of CaUC06G122770 vs. ExPASy TrEMBL
Match: A0A0A0LUI5 (HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.9e-103
Identity = 190/200 (95.00%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MRRSKESKKKTRPSSPLRDRTG+ T LESR YGS PSSLSPSASLLDRDLVTGES+LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LK SPDD VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of CaUC06G122770 vs. ExPASy TrEMBL
Match: A0A6J1I688 (uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 185/200 (92.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT  STR ESRR+GS+ S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LKLSPDD VSDYNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of CaUC06G122770 vs. ExPASy TrEMBL
Match: A0A6J1EZE0 (uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC111440950 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.3e-99
Identity = 183/200 (91.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGSSPSSLSPSASLLDRDLVTGESNLLGD 60
           MR SKESKKKTRPSSPLRDRT  S R ESRR+GS  S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDDRVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCL 120
           LKLSPDD VSDYNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQD GGCRIQ
Sbjct: 181 ELSAYGNVHRGQDPGGCRIQ 200

[Close]

BLAST of CaUC06G122770 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease )

HSP 1 Score: 245.7 bits (626), Expect = 3.1e-65
Identity = 125/190 (65.79%), Postives = 146/190 (76.84%), Query Frame = 0


Query: 14  SSPLRDRTGASTRLESRRYGSS-PSSLSPSASLLDRDLVTGESNLLGDLKLSPDDRVSDY 73
           SSP + R   S+   +R  G +    +  SA+LLDR+          ++ L P     D 
Sbjct: 55  SSPSKTRPELSSGSPNRNTGEARGGKVKTSATLLDRE----------EMGLFPGSGYGDP 114

Query: 74  N--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCLCHDYDHILPY 133
           N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN+VFRKLVGCPGCLCHDYDHI+PY
Sbjct: 115 NPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVPY 174

Query: 134 SKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHR 193
           SKGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+AYGNV R
Sbjct: 175 SKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYCRVAGRDMDLIELTAYGNVQR 234

Query: 194 GQDSGGCRIQ 201
              S GCRIQ
Sbjct: 235 APTSSGCRIQ 234

[Close]

BLAST of CaUC06G122770 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease )

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-61
Identity = 125/210 (59.52%), Postives = 146/210 (69.52%), Query Frame = 0


Query: 14  SSPLRDRTGASTRLESRRYGSS-PSSLSPSASLLDRDLVTGESNLLGDLKLSPDDRVSDY 73
           SSP + R   S+   +R  G +    +  SA+LLDR+          ++ L P     D 
Sbjct: 16  SSPSKTRPELSSGSPNRNTGEARGGKVKTSATLLDRE----------EMGLFPGSGYGDP 75

Query: 74  N--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCLCHDYDHILPY 133
           N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN+VFRKLVGCPGCLCHDYDHI+PY
Sbjct: 76  NPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVPY 135

Query: 134 S--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYC 193
           S                    KGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYC
Sbjct: 136 SKDMCPLEHAFDEPHKDFLDLKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYC 195

Query: 194 RVSGRDMDLLELSAYGNVHRGQDSGGCRIQ 201
           RV+GRDMDL+EL+AYGNV R   S GCRIQ
Sbjct: 196 RVAGRDMDLIELTAYGNVQRAPTSSGCRIQ 215

[Close]

BLAST of CaUC06G122770 vs. TAIR 10
Match: AT3G47490.2 (HNH endonuclease )

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31
Identity = 70/122 (57.38%), Postives = 84/122 (68.85%), Query Frame = 0


Query: 14  SSPLRDRTGASTRLESRRYGSS-PSSLSPSASLLDRDLVTGESNLLGDLKLSPDDRVSDY 73
           SSP + R   S+   +R  G +    +  SA+LLDR+          ++ L P     D 
Sbjct: 55  SSPSKTRPELSSGSPNRNTGEARGGKVKTSATLLDRE----------EMGLFPGSGYGDP 114

Query: 74  N--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCLCHDYDHILPY 133
           N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN+VFRKLVGCPGCLCHDYDHI+PY
Sbjct: 115 NPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVPY 166

[Close]

BLAST of CaUC06G122770 vs. TAIR 10
Match: AT1G18680.1 (HNH endonuclease domain-containing protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.1e-28
Identity = 52/125 (41.60%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 74  PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNVVFRKLVGCPGCLCHDYDHILPYSKG 133
           PR F    K +CW  A+ + GR P+RWR+D  GN+V ++   C GCLC +YDHI+PYSKG
Sbjct: 40  PRFFDGKAKNKCWANADIVPGRHPERWRKDVAGNIVCKRFGNCNGCLCFEYDHIVPYSKG 99

Query: 134 GKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQD 193
           G+S  ENCQ+LQ  VNR K  +  +    L   S   + + +++D++E++ YG+V R   
Sbjct: 100 GESIAENCQILQTRVNRFKSAQENVDATTLKSYSCGLQFTDKELDVIEMAVYGDVLRPGK 159

Query: 194 SGGCR 199
              C+
Sbjct: 160 ECRCK 164

The following BLAST results are available for this feature:

BLAST of CaUC06G122770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453210.1	2.0e-103	95.50	PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH...	[more]
XP_004138170.1	5.9e-103	95.00	uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical ...	[more]
XP_038880609.1	1.7e-102	94.00	uncharacterized protein LOC120072255 [Benincasa hispida]	[more]
XP_022972967.1	2.7e-100	92.50	uncharacterized protein LOC111471489 [Cucurbita maxima]	[more]
XP_023529236.1	3.0e-99	92.00	uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC06G122770 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G122770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US43	9.8e-104	95.50	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BWU4	9.8e-104	95.50	uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=...	[more]
A0A0A0LUI5	2.9e-103	95.00	HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV...	[more]
A0A6J1I688	1.3e-100	92.50	uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489...	[more]
A0A6J1EZE0	4.3e-99	91.50	uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]

BLAST of CaUC06G122770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47490.1	3.1e-65	65.79	HNH endonuclease	[more]
AT3G47490.3	1.2e-61	59.52	HNH endonuclease	[more]
AT3G47490.2	1.3e-31	57.38	HNH endonuclease	[more]
AT1G18680.1	5.1e-28	41.60	HNH endonuclease domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 122..155 e-value: 1.5E-4 score: 21.9
None	No IPR available	GENE3D	1.10.30.50		coord: 79..172 e-value: 4.7E-8 score: 34.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 5..200
None	No IPR available	PANTHER	PTHR33427:SF3	HNH ENDONUCLEASE	coord: 5..200
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 108..153 e-value: 1.00378E-5 score: 39.7624

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G122770.1	CaUC06G122770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding