CaUC06G122450 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G122450
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUbiquitinyl hydrolase 1
LocationCiama_Chr06: 27518780 .. 27520200 (+)
RNA-Seq ExpressionCaUC06G122450
SyntenyCaUC06G122450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTGGCATGACCATCGGAATGGAGCTTCTTCAATTGATTTGGATGGACCTGTGGATACCCATAAACTTATGGAATTGCACTTAACGTCTCAGTTAGAAGGTTTGGTGGCATTTGGAAAAGTAGGCACTGGGTTGCTTTGAGAAAGTTCAACGGATTATGGTATAATTTGGGCACTGATCTGCCTGCTCCTCATCCGTTAAAGGACACTGATGAAGACAATTTTTGGATCATGTGATCAGTAACAATGGAGAAATTAGCATTCTCAATCACTTCGTCAGAAATTCGAATCCCCACTATTGAAATCAATCCTAAATTTACTCCTGAAGTGTAGTTTTGAGCAGAGCCTGAGATGATATACAAATTCTGCTACATTAAACTTTCGAGGAACTCCAGAGATTTAAAAGATGGTCTTCTAAAAACTAATTCTCTCTCTCTCTAAACATATCCACATGTTATATTAACAATAGGAGACGCTAAAATAATAATGGAAGCTCCTAACTTGGGAAGAAAGTACGGAGAAGCCATAACAGGATGCAAGTTCCGAAAGAATAAAAGATTCTTCTTGAAGATATCATTCGCTAACAACGCTTAAGGATATCAGAGGAAAAAGGGACAAGAAAATACCTTTTCGTGCGTACAAGAACAAAAAAGAAAAAAAAATGCGTTCAAAGCCTGAAAGTTAACATACCCCGAAAGTTTCTTCCATGATTTAGACATGGCAGAATCATTCTGCTGCATTCGAATCCTCACCTGCCTCCGGCCCTGCTTTTAGAAATGAAGAGGACGTTAGTGGAAGAACTAGAATCGCTCTCTCGATTAACTTCAGTATGTGTGTTTCATTTTTATGGTAAGGAACCGAGTTAACGTAGAAGGGTATACGAAAAGTAAGACTATAAAAATGAGTCCACAACAAACTTCAAAGACGGATTCCAATCGAAAAGAATTACACAAAGTCGAAAGTTACTGAAAGTCTGATTAAATAACGTATGTAATGATGCATTAAACCTCACCACCTCCCACACTTCTTCAATTGATTTCTCCAACCTCCTACAATCTCTACTATTCCTCTCAAGCTACACTCCCCATAAGATAGCAGAAAAACAAGCTTGCCACAAGACTCTTTCGTTTTATCACGAATGAGAAAGTTCAACAAAACATATAAACAATAATGTTTATAACCACAATTTTCCAAAAGTAAAAATGAAAAACCAAATGGTTATCAAAGCCTATAATTTCTGTATTGTTCTTTTATGTGAAAAAATGGAGGTGGCAGAAAGAAAGAGCAATGTTAAAAAAACATAGGTTTTATGGTGAAGAGAGTCAAATATCCATCCTGAATTAGCTTTCCATTTCGATTACTCCTCTAAGATTTCTTACAGAAATGAAACAAAATGAAGAATGTAAGAAATCTGGATGA

mRNA sequence

ATGGTGTGGCATGACCATCGGAATGGAGCTTCTTCAATTGATTTGGATGGACCTGTGGATACCCATAAACTTATGGAATTGCACTTAACGTCTCAGTTAGAAGGTTTGGTGGCATTTGGAAAAACATGGCAGAATCATTCTGCTGCATTCGAATCCTCACCTGCCTCCGGCCCTGCTTTTAGAAATGAAGAGGACGTTAGTGGAAGAACTAGAATCGCTCTCTCGATTAACTTCAAAATGAAACAAAATGAAGAATGTAAGAAATCTGGATGA

Coding sequence (CDS)

ATGGTGTGGCATGACCATCGGAATGGAGCTTCTTCAATTGATTTGGATGGACCTGTGGATACCCATAAACTTATGGAATTGCACTTAACGTCTCAGTTAGAAGGTTTGGTGGCATTTGGAAAAACATGGCAGAATCATTCTGCTGCATTCGAATCCTCACCTGCCTCCGGCCCTGCTTTTAGAAATGAAGAGGACGTTAGTGGAAGAACTAGAATCGCTCTCTCGATTAACTTCAAAATGAAACAAAATGAAGAATGTAAGAAATCTGGATGA

Protein sequence

MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQNHSAAFESSPASGPAFRNEEDVSGRTRIALSINFKMKQNEECKKSG
Homology
[Close]
BLAST of CaUC06G122450 vs. NCBI nr
Match: XP_038902688.1 (josephin-like protein [Benincasa hispida] >XP_038902689.1 josephin-like protein [Benincasa hispida])

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-05
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHDHRNGASSIDLDGP DTHKLM + L   +     FG  W++
Sbjct: 89  VVWHDHRNGASSIDLDGPEDTHKLMGIVLNVSVR---RFGGIWKS 130

[Close]
BLAST of CaUC06G122450 vs. NCBI nr
Match: XP_022148354.1 (josephin-like protein [Momordica charantia] >XP_022148355.1 josephin-like protein [Momordica charantia] >XP_022148357.1 josephin-like protein [Momordica charantia] >XP_022148358.1 josephin-like protein [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-04
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHD RNGASSIDLDGP DTHKLM + L   +     FG  W++
Sbjct: 89  VVWHDRRNGASSIDLDGPEDTHKLMGIVLNVSVR---RFGGIWKS 130

[Close]
BLAST of CaUC06G122450 vs. NCBI nr
Match: KAG7010513.1 (Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 55.8 bits (133), Expect = 2.2e-04
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHDHRNGASSIDLDGP  THKLM + L   +     FG  W++
Sbjct: 89  VVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVR---RFGGIWKS 130

[Close]
BLAST of CaUC06G122450 vs. NCBI nr
Match: KAG6570667.1 (Josephin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 55.8 bits (133), Expect = 2.2e-04
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHDHRNGASSIDLDGP  THKLM + L   +     FG  W++
Sbjct: 89  VVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVR---RFGGIWKS 130

[Close]
BLAST of CaUC06G122450 vs. NCBI nr
Match: XP_022986948.1 (josephin-like protein [Cucurbita maxima])

HSP 1 Score: 55.8 bits (133), Expect = 2.2e-04
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHDHRNGASSIDLDGP  THKLM + L   +     FG  W++
Sbjct: 89  VVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVR---RFGGIWKS 130

[Close]
BLAST of CaUC06G122450 vs. ExPASy TrEMBL
Match: A0A6J1D2P2 (Ubiquitinyl hydrolase 1 OS=Momordica charantia OX=3673 GN=LOC111017028 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.0e-05
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHD RNGASSIDLDGP DTHKLM + L   +     FG  W++
Sbjct: 89  VVWHDRRNGASSIDLDGPEDTHKLMGIVLNVSVR---RFGGIWKS 130

[Close]
BLAST of CaUC06G122450 vs. ExPASy TrEMBL
Match: A0A6J1FYW5 (Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449101 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-04
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHDHRNGASSIDLDGP  THKLM + L   +     FG  W++
Sbjct: 89  VVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVR---RFGGIWKS 130

[Close]
BLAST of CaUC06G122450 vs. ExPASy TrEMBL
Match: A0A6J1JI12 (Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111484533 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-04
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHDHRNGASSIDLDGP  THKLM + L   +     FG  W++
Sbjct: 89  VVWHDHRNGASSIDLDGPEATHKLMGIVLNVPVR---RFGGIWKS 130

[Close]
BLAST of CaUC06G122450 vs. ExPASy TrEMBL
Match: A0A1S4E4I3 (Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103502098 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.3e-04
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHDHRNGAS+IDLDGP DT KLM + L   +     FG  W++
Sbjct: 90  VVWHDHRNGASTIDLDGPDDTRKLMGIVLNVSVR---RFGGIWKS 131

[Close]
BLAST of CaUC06G122450 vs. ExPASy TrEMBL
Match: A0A5D3CVY1 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00510 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.3e-04
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1   MVWHDHRNGASSIDLDGPVDTHKLMELHLTSQLEGLVAFGKTWQN 46
           +VWHDHRNGAS+IDLDGP DT KLM + L   +     FG  W++
Sbjct: 90  VVWHDHRNGASTIDLDGPDDTRKLMGIVLNVSVR---RFGGIWKS 131

The following BLAST results are available for this feature:
BLAST of CaUC06G122450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902688.12.0e-0560.00josephin-like protein [Benincasa hispida] >XP_038902689.1 josephin-like protein ... [more]
XP_022148354.11.7e-0457.78josephin-like protein [Momordica charantia] >XP_022148355.1 josephin-like protei... [more]
KAG7010513.12.2e-0457.78Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6570667.12.2e-0457.78Josephin-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022986948.12.2e-0457.78josephin-like protein [Cucurbita maxima][more]
BLAST of CaUC06G122450 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC06G122450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D2P28.0e-0557.78Ubiquitinyl hydrolase 1 OS=Momordica charantia OX=3673 GN=LOC111017028 PE=4 SV=1[more]
A0A6J1FYW51.1e-0457.78Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449101 PE=4 SV=1[more]
A0A6J1JI121.1e-0457.78Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111484533 PE=4 SV=1[more]
A0A1S4E4I32.3e-0455.56Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103502098 PE=4 SV=1[more]
A0A5D3CVY12.3e-0455.56Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CaUC06G122450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G122450.1CaUC06G122450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity