CaUC06G122430 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G122430
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description50S ribosomal protein L4
LocationCiama_Chr06: 27518273 .. 27522221 (-)
RNA-Seq ExpressionCaUC06G122430
SyntenyCaUC06G122430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACAAGTGATAGAGCGAGATTGGAGAGTGTTTTGTAATTGATTTGTAATAGGTAAGACTTGTCAAAGCGAGAGCAATATTGAGCGAGACTAGAGAGAGCGAGATAGCGAGATCATGTAAGTGTGTTGTAATTGTCTTAACTCAATTACATGAAGTGAAAGTGAGCAAGAGTGAGAGCGAGAATGAGACAAATGATTATTTTCCGTAAACTTGAAGTTTCGTTCGTCTAGCAAGAAATCACCTCTCACTCTCGCTGCTATTGCTCTCGCTAGTATCTCGCTCTCTTTGGTATCGCTCTTCTTGATTATACTCGTCTTCAACCCTCTCTGGTTTCTTTTATCATCAAAAGCTTTCACTTTCAAAAAACTAAATTTGAGAAAATTTAATATATATTTATTTGATATTATTTTGTAATTATTTTTCAATTTATTTTTTAAATTTATGATATTGCATCAACATTTACACATATATTTAGAATATACATATAAATTTTGTCTTACTCTATATAAATGATATTAAAAATGATCAATTATAATCTAATTAAACTAGAATCAAAGTTTCATGAAGTTTTACAAAATTTTCATCAATATTGATATTTTTATCGATATCTTCACAAAATCGAGACCTTAATATCTTTATCAACATTAAACTTTCGACATACCATAAAAATTTATAATATCTTTGACTTTTAATACCCAAAATGTAAGTAATTTTCCCCTAAGTTTACGATTTAAATTATTATTTTAATGGAAATGGATACAAGTTAAATTACTTAAAAGTGAAAAATGTTTTATTTATTTATTTATTTTAATTTCAAATTTTTGGTAAAAACGGACGAAAGATGGTATTTTCTTTTTTGCCACTGATCTCCAGCGGGAGTGGATAACGAAGCTATCCGCAGAACTAAGCTCCTCCATCGCACCAACAATGGCGGCCTCCACCACGCCATTGTCGCTCTCTTTCTTCACTTCATCCGTCTTCCTTTCTTCCCCCAACCTCCAAAATTCCAAGCTCTTCTGCAATTGGAAACCTAACTCCCTTAAACCCCAAACTAAACCCTTATCAATCTCCTCCGAGCTCGCTACTCTTCCAGTCCTCTCCTTCACTGGAGAAAAAGTCGGTGAAACCTACCTCGACCTAAAATCCGCTCCACCGGAAACCGCCCGCGCTGTCGTTCACCGAGCCATTATCACCGATCAACAGAACAAGCGCCGTGGGACCGCCTCGACTCTCACCAGAGCTGAGGTTAGTGGAGGCGGCAGAAAACCCTACCAGCAGAAGAAAACCGGGAAGGCTCGTCGCGGTTCGATGCGTACTCCTCTCCGGCCAGGTGGAGGGGTGGTCTTCGGGCCGAAACCTAGAGATTGGTCAATTAAGATCAACAGAAAGGAGAAGAGACTGGCAATATCGACGGCGGTGGCTAGTGCGGCGGTTAATACGATAGTGGTGGAGGATTTTGGGGACAAGTTCGAGAAGCCGAAAACTAAAGAATTCATCGCTGCGTTGAAGAGATGGGGAATCGATCCAAAGGAGAAATCATTGTTCTTAATGACGGAGGTTTCTGATAATGTCCGACTATCTAGCCGTAATATTGGAACGTTGAAGTTGTTGACGCCGAGGACGCTGAATTTGTTTGATATTTTGGATTCCGATAAGTTGGTTTTGACGCCGGCGGCGGTAGAATATCTGAATGAGAGATATGGAATTAATTACGAAGAAGGAATCGAAGATGAAGAAGAAGAAGGTGGAGAAGACGAAGAAGGTTGATTTTCTTGCCTTTCCCCAATTCAATTATTCAATTAAAGAAATGATAGACTGCTTTAAGAACATACATTATCATTCCATACTTGAATTTTGTCTAGTTCAACATTCAAATCACATTACAGTGCCATCTTCTTATTGAATTCTTGATTTCTTAGATACCCTTTAATGATGGGATTCCTTAGAATTATACTGTGAATTCTGGTTTTGGTTCTGTTTCTATTAACATTTGCGTTGTCATTTTGTATAATCGATTTTCATCCAGATTTCTTACATTCTTCATTTTGTTTCATTTCTGTAAGAAATCTTAGAGGAGTAATCGAAATGGAAAGCTAATTCAGGATGGATATTTGACTCTCTTCACCATAAAACCTATGTTTTTTTAACATTGCTCTTTCTTTCTGCCACCTCCATTTTTTCACATAAAAGAACAATACAGAAATTATAGGCTTTGATAACCATTTGGTTTTTCATTTTTACTTTTGGAAAATTGTGGTTATAAACATTATTGTTTATATGTTTTGTTGAACTTTCTCATTCGTGATAAAACGAAAGAGTCTTGTGGCAAGCTTGTTTTTCTGCTATCTTATGGGGAGTGTAGCTTGAGAGGAATAGTAGAGATTGTAGGAGGTTGGAGAAATCAATTGAAGAAGTGTGGGAGGTGGTGAGGTTTAATGCATCATTACATACGTTATTTAATCAGACTTTCAGTAACTTTCGACTTTGTGTAATTCTTTTCGATTGGAATCCGTCTTTGAAGTTTGTTGTGGACTCATTTTTATAGTCTTACTTTTCGTATACCCTTCTACGTTAACTCGGTTCCTTACCATAAAAATGAAACACACATACTGAAGTTAATCGAGAGAGCGATTCTAGTTCTTCCACTAACGTCCTCTTCATTTCTAAAAGCAGGGCCGGAGGCAGGTGAGGATTCGAATGCAGCAGAATGATTCTGCCATGTCTAAATCATGGAAGAAACTTTCGGGGTATGTTAACTTTCAGGCTTTGAACGCATTTTTTTTTCTTTTTTGTTCTTGTACGCACGAAAAGGTATTTTCTTGTCCCTTTTTCCTCTGATATCCTTAAGCGTTGTTAGCGAATGATATCTTCAAGAAGAATCTTTTATTCTTTCGGAACTTGCATCCTGTTATGGCTTCTCCGTACTTTCTTCCCAAGTTAGGAGCTTCCATTATTATTTTAGCGTCTCCTATTGTTAATATAACATGTGGATATGTTTAGAGAGAGAGAGAATTAGTTTTTAGAAGACCATCTTTTAAATCTCTGGAGTTCCTCGAAAGTTTAATGTAGCAGAATTTGTATATCATCTCAGGCTCTGCTCAAAACTACACTTCAGGAGTAAATTTAGGATTGATTTCAATAGTGGGGATTCGAATTTCTGACGAAGTGATTGAGAATGCTAATTTCTCCATTGTTACTGATCACATGATCCAAAAATTGTCTTCATCAGTGTCCTTTAACGGATGAGGAGCAGGCAGATCAGTGCCCAAATTATACCATAATCCGTTGAACTTTCTCAAAGCAACCCAGTGCCTACTTTTCCAAATGCCACCAAACCTTCTAACTGAGACGTTAAGTGCAATTCCATAAGTTTATGGGTATCCACAGGTCCATCCAAATCAATTGAAGAAGCTCCATTCCGATGGTCATGCCACACCATACTCTTTCCTTTCTCTACCAGAGATGAAATTAGGACATTTATGTCATAATTTCCAGTTGTGATGTGGCTTAAAGACAAATGATAATGACGTCCAAGGTTCTTTGTTTGGCTCGTCGAGCACCAGCTTTTCAGCAATTGCATTTAAGTTTGCTCGAGTAAATGCATCCTTTTCCTGTTATGAATAAAAGATATTTATGATGCTAATAGAAGATATAGTGGTAAGAAGACATCGAAATACATAAAGAATGCAACAAATCGTGAAACAGTGAGACGATAAGTTCTAATTCTGAGATCCTATGGACATCGTTCCTTCTTAATGATGAGAAACAGTATAAATCGGTTAAACAGCATCTTAATTACATGGCAAATAATAAATCTTCGGAGATGGAAGCGATCTCGGAATTGTGTATCACCGACGGAGTGCCTTCGCCGCGGATAGGGCATGCGCCGCCGCGAACTTCGGTCAGGAGGGCGGCGATGGATTTTGACTTCGAAGAAATCGGCTAG

mRNA sequence

ATGAGACAAGTAAGACTTGTCAAAGCGAGAGCAATATTGAGCGAGACTAGAGAGAGCGAGATAGCGAGATCATGTAAGTGTGTTTTTCGTTCGTCTAGCAAGAAATCACCTCTCACTCTCGCTGCTATTGCTCTCGCTAGTATCTCGCTCTCTTTGCGGGAGTGGATAACGAAGCTATCCGCAGAACTAAGCTCCTCCATCGCACCAACAATGGCGGCCTCCACCACGCCATTGTCGCTCTCTTTCTTCACTTCATCCGTCTTCCTTTCTTCCCCCAACCTCCAAAATTCCAAGCTCTTCTGCAATTGGAAACCTAACTCCCTTAAACCCCAAACTAAACCCTTATCAATCTCCTCCGAGCTCGCTACTCTTCCAGTCCTCTCCTTCACTGGAGAAAAAGTCGGTGAAACCTACCTCGACCTAAAATCCGCTCCACCGGAAACCGCCCGCGCTGTCGTTCACCGAGCCATTATCACCGATCAACAGAACAAGCGCCGTGGGACCGCCTCGACTCTCACCAGAGCTGAGGTTAGTGGAGGCGGCAGAAAACCCTACCAGCAGAAGAAAACCGGGAAGGCTCGTCGCGGTTCGATGCGTACTCCTCTCCGGCCAGGTGGAGGGGTGGTCTTCGGGCCGAAACCTAGAGATTGGTCAATTAAGATCAACAGAAAGGAGAAGAGACTGGCAATATCGACGGCGGTGGCTAGTGCGGCGGTTAATACGATAGTGGTGGAGGATTTTGGGGACAAGTTCGAGAAGCCGAAAACTAAAGAATTCATCGCTGCGTTGAAGAGATGGGGAATCGATCCAAAGGAGAAATCATTGTTCTTAATGACGGAGGTTTCTGATAATGTCCGACTATCTAGCCGTAATATTGGAACGTTGAAGTTGTTGACGCCGAGGACGCTGAATTTGTTTGATATTTTGGATTCCGATAAGTTGGTTTTGACGCCGGCGGCGGTAGAATATCTGAATGAGAGATATGGAATTAATTACGAAGAAGGAATCGAAGATGAAGAAGAAGAAGGTGGAGAAGACGAAGAAGGCTCTGCTCAAAACTACACTTCAGGAGTAAATTTAGGATTGATTTCAATAGTGGGGATTCGAATTTCTGACGAAGTGATTGAGAATGCTAATTTCTCCATTACAAATGATAATGACGTCCAAGGTTCTTTGTTTGGCTCGTCGAGCACCAGCTTTTCAGCAATTGCATTTAAGTTTGCTCGATATAAATCGGTTAAACAGCATCTTAATTACATGGCAAATAATAAATCTTCGGAGATGGAAGCGATCTCGGAATTGTGTATCACCGACGGAGTGCCTTCGCCGCGGATAGGGCATGCGCCGCCGCGAACTTCGGTCAGGAGGGCGGCGATGGATTTTGACTTCGAAGAAATCGGCTAG

Coding sequence (CDS)

ATGAGACAAGTAAGACTTGTCAAAGCGAGAGCAATATTGAGCGAGACTAGAGAGAGCGAGATAGCGAGATCATGTAAGTGTGTTTTTCGTTCGTCTAGCAAGAAATCACCTCTCACTCTCGCTGCTATTGCTCTCGCTAGTATCTCGCTCTCTTTGCGGGAGTGGATAACGAAGCTATCCGCAGAACTAAGCTCCTCCATCGCACCAACAATGGCGGCCTCCACCACGCCATTGTCGCTCTCTTTCTTCACTTCATCCGTCTTCCTTTCTTCCCCCAACCTCCAAAATTCCAAGCTCTTCTGCAATTGGAAACCTAACTCCCTTAAACCCCAAACTAAACCCTTATCAATCTCCTCCGAGCTCGCTACTCTTCCAGTCCTCTCCTTCACTGGAGAAAAAGTCGGTGAAACCTACCTCGACCTAAAATCCGCTCCACCGGAAACCGCCCGCGCTGTCGTTCACCGAGCCATTATCACCGATCAACAGAACAAGCGCCGTGGGACCGCCTCGACTCTCACCAGAGCTGAGGTTAGTGGAGGCGGCAGAAAACCCTACCAGCAGAAGAAAACCGGGAAGGCTCGTCGCGGTTCGATGCGTACTCCTCTCCGGCCAGGTGGAGGGGTGGTCTTCGGGCCGAAACCTAGAGATTGGTCAATTAAGATCAACAGAAAGGAGAAGAGACTGGCAATATCGACGGCGGTGGCTAGTGCGGCGGTTAATACGATAGTGGTGGAGGATTTTGGGGACAAGTTCGAGAAGCCGAAAACTAAAGAATTCATCGCTGCGTTGAAGAGATGGGGAATCGATCCAAAGGAGAAATCATTGTTCTTAATGACGGAGGTTTCTGATAATGTCCGACTATCTAGCCGTAATATTGGAACGTTGAAGTTGTTGACGCCGAGGACGCTGAATTTGTTTGATATTTTGGATTCCGATAAGTTGGTTTTGACGCCGGCGGCGGTAGAATATCTGAATGAGAGATATGGAATTAATTACGAAGAAGGAATCGAAGATGAAGAAGAAGAAGGTGGAGAAGACGAAGAAGGCTCTGCTCAAAACTACACTTCAGGAGTAAATTTAGGATTGATTTCAATAGTGGGGATTCGAATTTCTGACGAAGTGATTGAGAATGCTAATTTCTCCATTACAAATGATAATGACGTCCAAGGTTCTTTGTTTGGCTCGTCGAGCACCAGCTTTTCAGCAATTGCATTTAAGTTTGCTCGATATAAATCGGTTAAACAGCATCTTAATTACATGGCAAATAATAAATCTTCGGAGATGGAAGCGATCTCGGAATTGTGTATCACCGACGGAGTGCCTTCGCCGCGGATAGGGCATGCGCCGCCGCGAACTTCGGTCAGGAGGGCGGCGATGGATTTTGACTTCGAAGAAATCGGCTAG

Protein sequence

MRQVRLVKARAILSETRESEIARSCKCVFRSSSKKSPLTLAAIALASISLSLREWITKLSAELSSSIAPTMAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFTGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEGSAQNYTSGVNLGLISIVGIRISDEVIENANFSITNDNDVQGSLFGSSSTSFSAIAFKFARYKSVKQHLNYMANNKSSEMEAISELCITDGVPSPRIGHAPPRTSVRRAAMDFDFEEIG
Homology
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BLAST of CaUC06G122430 vs. NCBI nr
Match: XP_038902816.1 (50S ribosomal protein L4, chloroplastic [Benincasa hispida])

HSP 1 Score: 509.6 bits (1311), Expect = 2.8e-140
Identity = 269/279 (96.42%), Postives = 270/279 (96.77%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MA ST+P SLSFFTSSVFLSSPN QNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT
Sbjct: 1   MATSTSPSSLSFFTSSVFLSSPNHQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGETYLDLKSAP ETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPQETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEG 350
           SDKLVLTPAAVEYLNERYGINYEE    EEEEGG DEEG
Sbjct: 241 SDKLVLTPAAVEYLNERYGINYEEA---EEEEGGADEEG 276

[Close]
BLAST of CaUC06G122430 vs. NCBI nr
Match: XP_023532270.1 (50S ribosomal protein L4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.5 bits (1290), Expect = 7.8e-138
Identity = 264/279 (94.62%), Postives = 271/279 (97.13%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MAASTTP SLSFF+SS+FLSS N QNSKLFCNWKPNS KPQ+KPLSISS+LATLPVLSFT
Sbjct: 1   MAASTTPSSLSFFSSSIFLSSAN-QNSKLFCNWKPNSFKPQSKPLSISSQLATLPVLSFT 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGET LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETVLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL+
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILN 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEG 350
           SDKLVLTPAAV+YLNERYGINYEEGIEDEEEE  E+ EG
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEDEEEEEEEELEG 278

[Close]
BLAST of CaUC06G122430 vs. NCBI nr
Match: XP_022148353.1 (50S ribosomal protein L4, chloroplastic [Momordica charantia])

HSP 1 Score: 501.1 bits (1289), Expect = 1.0e-137
Identity = 262/279 (93.91%), Postives = 271/279 (97.13%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MA STTP SLSFFTSSVFLSS N QNSKLFC+WKPNSLKPQTKPLSISS+LATLPVLSF 
Sbjct: 1   MATSTTPSSLSFFTSSVFLSSAN-QNSKLFCHWKPNSLKPQTKPLSISSQLATLPVLSFA 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEG 350
           SDK+VLTPAAV+YLNERYGINYE GIED+EEE  E+++G
Sbjct: 241 SDKMVLTPAAVDYLNERYGINYEGGIEDDEEEEEEEQQG 278

[Close]
BLAST of CaUC06G122430 vs. NCBI nr
Match: XP_022948155.1 (50S ribosomal protein L4, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 500.0 bits (1286), Expect = 2.3e-137
Identity = 263/282 (93.26%), Postives = 271/282 (96.10%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MAAST P SLSFF+SS+FLSS N QNSKLFCNWKPNS KPQ+KPLSISS+LATLPVLSFT
Sbjct: 1   MAASTAPSSLSFFSSSIFLSSAN-QNSKLFCNWKPNSFKPQSKPLSISSQLATLPVLSFT 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGET LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETVLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL+
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILN 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEGSAQ 353
           SDKLVLTPAAV+YLNERYGINYEEGIEDEEEE  E+ EG  +
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEDEEEEEEEELEGEEE 281

[Close]
BLAST of CaUC06G122430 vs. NCBI nr
Match: XP_022948154.1 (50S ribosomal protein L4, chloroplastic-like isoform X1 [Cucurbita moschata] >KAG6605425.1 50S ribosomal protein L4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035374.1 50S ribosomal protein L4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.6 bits (1285), Expect = 2.9e-137
Identity = 263/279 (94.27%), Postives = 270/279 (96.77%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MAAST P SLSFF+SS+FLSS N QNSKLFCNWKPNS KPQ+KPLSISS+LATLPVLSFT
Sbjct: 1   MAASTAPSSLSFFSSSIFLSSAN-QNSKLFCNWKPNSFKPQSKPLSISSQLATLPVLSFT 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGET LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETVLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL+
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILN 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEG 350
           SDKLVLTPAAV+YLNERYGINYEEGIEDEEEE  E+ EG
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEDEEEEEEEELEG 278

[Close]
BLAST of CaUC06G122430 vs. ExPASy Swiss-Prot
Match: O50061 (50S ribosomal protein L4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL4 PE=2 SV=2)

HSP 1 Score: 364.4 bits (934), Expect = 1.9e-99
Identity = 194/280 (69.29%), Postives = 235/280 (83.93%), Query Frame = 0 

Query: 72  AASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFTG 131
           +++T P SLSFF+SS+FLSS + Q  K + +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 132 EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 191
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 192 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 251
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 252 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 311
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 312 LDSDKLVLTPAAVEYLNERYGIN-YEEGIEDEEEEGGEDE 348
           L++DKLVLTPAAVE+LN RYG++  EE  +DE+E  G +E
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDETEGSEE 281

[Close]
BLAST of CaUC06G122430 vs. ExPASy Swiss-Prot
Match: O80361 (50S ribosomal protein L4, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 9.6e-99
Identity = 193/271 (71.22%), Postives = 228/271 (84.13%), Query Frame = 0 

Query: 79  SLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFTGEKVGETY 138
           SLSFF+SS+FLS+PN+Q+SK      P  L       +I SE+AT+P+LSF G +VG T 
Sbjct: 4   SLSFFSSSIFLSNPNIQSSKHLLFRSPKQLS-VAAIATIRSEVATIPILSFDGAEVGSTT 63

Query: 139 LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTGKARRGSM 198
           L+LKSAP +TARAVVHR + TD +N+RRGTASTLTR+EV GGG KPY QKKTG+ARRGS 
Sbjct: 64  LNLKSAPLDTARAVVHRGLTTDLRNQRRGTASTLTRSEVRGGGIKPYPQKKTGRARRGSN 123

Query: 199 RTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDKFEKPKTKE 258
           RTPLRPGGGVVFGPKP+DWS+KIN+KEKRLAISTA++SA+ NTIVVE+F DKFEKPKTKE
Sbjct: 124 RTPLRPGGGVVFGPKPKDWSVKINKKEKRLAISTALSSASENTIVVEEFNDKFEKPKTKE 183

Query: 259 FIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTP 318
           FI  ++RWG+DPKEKSLFLMT+VSDNV LSSRNIGTLK+LTPRTLNLFDILDS+KLVLT 
Sbjct: 184 FIDLMRRWGLDPKEKSLFLMTDVSDNVILSSRNIGTLKMLTPRTLNLFDILDSEKLVLTK 243

Query: 319 AAVEYLNERYGINYEEGIEDEEEEGGEDEEG 350
           +AV++LNERYG   E   EDEEE+  ED +G
Sbjct: 244 SAVDFLNERYG--DENEWEDEEEDDQEDNDG 271

[Close]
BLAST of CaUC06G122430 vs. ExPASy Swiss-Prot
Match: O49937 (50S ribosomal protein L4, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL4 PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.7e-92
Identity = 178/280 (63.57%), Postives = 224/280 (80.00%), Query Frame = 0 

Query: 71  MAAST-TPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSF 130
           MA ST + LSLSFF+SS+F S     +SK       +S    +  LSI SEL  LP+L+F
Sbjct: 1   MATSTSSSLSLSFFSSSLFSSKSRNFSSKPILKLPSSSHSQTSLSLSIKSELIPLPILNF 60

Query: 131 TGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKK 190
           +GEKVGET+L+LK+APPE ARAVVHR +IT  QNKRRGTASTLTRAEV GGGRKPY QKK
Sbjct: 61  SGEKVGETFLNLKTAPPEKARAVVHRGLITHLQNKRRGTASTLTRAEVRGGGRKPYPQKK 120

Query: 191 TGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGD 250
           TG+ARRGS  +PLRPGGGV+FGPKPRDW+IK+N+KE+RLA+STA+ASA  N+ VVE+F +
Sbjct: 121 TGRARRGSQGSPLRPGGGVIFGPKPRDWTIKMNKKERRLALSTAIASAVGNSFVVEEFAE 180

Query: 251 KFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL 310
            FEKPKTK+FIAA++RWG+DP EKSLF + ++ +NV  S RNI TLKLLTPR+LNLFD+L
Sbjct: 181 NFEKPKTKDFIAAMQRWGLDPAEKSLFFLMDLVENVEKSGRNIRTLKLLTPRSLNLFDVL 240

Query: 311 DSDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEG 350
           +++KLV T   ++YLN+RYG+   + +EDE+EE  E+EEG
Sbjct: 241 NAEKLVFTEGTIQYLNQRYGV---DTLEDEDEEEEEEEEG 277

[Close]
BLAST of CaUC06G122430 vs. ExPASy Swiss-Prot
Match: Q8DMN0 (50S ribosomal protein L4 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rplD PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.7e-56
Identity = 110/204 (53.92%), Postives = 148/204 (72.55%), Query Frame = 0 

Query: 126 VLSFTGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPY 185
           V  + G   GE  LDL +A PETA  +VHRA++    N R+GT ST TRAEV GGGRKP+
Sbjct: 6   VKDWQGADSGEATLDLATAKPETASHIVHRALVRQLANARQGTVSTKTRAEVRGGGRKPW 65

Query: 186 QQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE 245
           +QK TG+AR GS+R+PL  GGGV+FGPKPRD+S K+NRKE+RLA+ TA+ S   + IVV+
Sbjct: 66  RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYSQKMNRKERRLALRTALMSRVEDLIVVQ 125

Query: 246 DFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNL 305
           DF D   +PKTKE + AL+RWGI+P++K L L  ++++ V LS+RN+ TLKLL    LN+
Sbjct: 126 DFADHLPRPKTKELVTALQRWGIEPEQKVLLLAADITETVALSARNVPTLKLLRADQLNV 185

Query: 306 FDILDSDKLVLTPAAVEYLNERYG 330
           FD+L +D++V T  A+  + E YG
Sbjct: 186 FDLLYADRIVATTGAIAKIQEVYG 209

[Close]
BLAST of CaUC06G122430 vs. ExPASy Swiss-Prot
Match: B0JI02 (50S ribosomal protein L4 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rplD PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.9e-55
Identity = 106/204 (51.96%), Postives = 152/204 (74.51%), Query Frame = 0 

Query: 126 VLSFTGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPY 185
           V ++ GE+ G   L+LK+A PETA+ ++HR +++     R+G AS+ TR+EV GGGRKP+
Sbjct: 6   VKNWQGEEAGTGTLELKTAKPETAKHLIHRVVVSHLAAARQGNASSKTRSEVRGGGRKPW 65

Query: 186 QQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE 245
           +QK TG+AR GS+R+PL  GGGV+FGPKPRD+ +K+NRKEKRLA+ TA+ S A N IVVE
Sbjct: 66  RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFEVKVNRKEKRLALRTALISQADNFIVVE 125

Query: 246 DFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNL 305
            F ++F +PKTKE  AAL RWG  P+EK L ++TE+ +NV LS RNI  LK++   +LN+
Sbjct: 126 SFAEQFSQPKTKELTAALSRWGASPEEKILLILTEIPENVYLSGRNICNLKIIRADSLNV 185

Query: 306 FDILDSDKLVLTPAAVEYLNERYG 330
           +D++ +D+++ T AA+  + E YG
Sbjct: 186 YDVILADRVIATAAALAKIEEVYG 209

[Close]
BLAST of CaUC06G122430 vs. ExPASy TrEMBL
Match: A0A6J1D3V7 (50S ribosomal protein L4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017027 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 4.9e-138
Identity = 262/279 (93.91%), Postives = 271/279 (97.13%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MA STTP SLSFFTSSVFLSS N QNSKLFC+WKPNSLKPQTKPLSISS+LATLPVLSF 
Sbjct: 1   MATSTTPSSLSFFTSSVFLSSAN-QNSKLFCHWKPNSLKPQTKPLSISSQLATLPVLSFA 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEG 350
           SDK+VLTPAAV+YLNERYGINYE GIED+EEE  E+++G
Sbjct: 241 SDKMVLTPAAVDYLNERYGINYEGGIEDDEEEEEEEQQG 278

[Close]
BLAST of CaUC06G122430 vs. ExPASy TrEMBL
Match: A0A6J1G8Y3 (50S ribosomal protein L4, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451819 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 1.1e-137
Identity = 263/282 (93.26%), Postives = 271/282 (96.10%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MAAST P SLSFF+SS+FLSS N QNSKLFCNWKPNS KPQ+KPLSISS+LATLPVLSFT
Sbjct: 1   MAASTAPSSLSFFSSSIFLSSAN-QNSKLFCNWKPNSFKPQSKPLSISSQLATLPVLSFT 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGET LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETVLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL+
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILN 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEGSAQ 353
           SDKLVLTPAAV+YLNERYGINYEEGIEDEEEE  E+ EG  +
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEDEEEEEEEELEGEEE 281

[Close]
BLAST of CaUC06G122430 vs. ExPASy TrEMBL
Match: A0A6J1G917 (50S ribosomal protein L4, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451819 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.4e-137
Identity = 263/279 (94.27%), Postives = 270/279 (96.77%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MAAST P SLSFF+SS+FLSS N QNSKLFCNWKPNS KPQ+KPLSISS+LATLPVLSFT
Sbjct: 1   MAASTAPSSLSFFSSSIFLSSAN-QNSKLFCNWKPNSFKPQSKPLSISSQLATLPVLSFT 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGET LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETVLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL+
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILN 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEG 350
           SDKLVLTPAAV+YLNERYGINYEEGIEDEEEE  E+ EG
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEDEEEEEEEELEG 278

[Close]
BLAST of CaUC06G122430 vs. ExPASy TrEMBL
Match: A0A5A7V3J2 (50S ribosomal protein L4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00490 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.9e-137
Identity = 263/278 (94.60%), Postives = 269/278 (96.76%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MAAST+P SLSFFTSSVFLSSP  QN  LF N KPNSLKPQTKPLSISSELATLPVLSFT
Sbjct: 1   MAASTSPSSLSFFTSSVFLSSPKHQNPNLFFNCKPNSLKPQTKPLSISSELATLPVLSFT 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE+FGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEEFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEE 349
           SDKLVLTPAAV+YLNERYGINYEEGIE+EEEE  E+EE
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEEEEEEEEEEEE 278

[Close]
BLAST of CaUC06G122430 vs. ExPASy TrEMBL
Match: A0A1S3CM35 (50S ribosomal protein L4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502034 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.9e-137
Identity = 263/278 (94.60%), Postives = 269/278 (96.76%), Query Frame = 0 

Query: 71  MAASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 130
           MAAST+P SLSFFTSSVFLSSP  QN  LF N KPNSLKPQTKPLSISSELATLPVLSFT
Sbjct: 1   MAASTSPSSLSFFTSSVFLSSPKHQNPNLFFNCKPNSLKPQTKPLSISSELATLPVLSFT 60

Query: 131 GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 190
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 191 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 250
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE+FGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEEFGDK 180

Query: 251 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 310
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 311 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEE 349
           SDKLVLTPAAV+YLNERYGINYEEGIE+EEEE  E+EE
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEEEEEEEEEEEE 278

[Close]
BLAST of CaUC06G122430 vs. TAIR 10
Match: AT1G07320.1 (ribosomal protein L4 )

HSP 1 Score: 364.4 bits (934), Expect = 1.4e-100
Identity = 194/280 (69.29%), Postives = 235/280 (83.93%), Query Frame = 0 

Query: 72  AASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFTG 131
           +++T P SLSFF+SS+FLSS + Q  K + +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 132 EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 191
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 192 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 251
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 252 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 311
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 312 LDSDKLVLTPAAVEYLNERYGIN-YEEGIEDEEEEGGEDE 348
           L++DKLVLTPAAVE+LN RYG++  EE  +DE+E  G +E
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDETEGSEE 281

[Close]
BLAST of CaUC06G122430 vs. TAIR 10
Match: AT1G07320.2 (ribosomal protein L4 )

HSP 1 Score: 364.0 bits (933), Expect = 1.8e-100
Identity = 192/278 (69.06%), Postives = 234/278 (84.17%), Query Frame = 0 

Query: 72  AASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFTG 131
           +++T P SLSFF+SS+FLSS + Q  K + +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 132 EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 191
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 192 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 251
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 252 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 311
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 312 LDSDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGED 347
           L++DKLVLTPAAVE+LN RYG++  E  +D+E+E  E+
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDETEEE 279

[Close]
BLAST of CaUC06G122430 vs. TAIR 10
Match: AT1G07320.3 (ribosomal protein L4 )

HSP 1 Score: 364.0 bits (933), Expect = 1.8e-100
Identity = 191/274 (69.71%), Postives = 232/274 (84.67%), Query Frame = 0 

Query: 72  AASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFTG 131
           +++T P SLSFF+SS+FLSS + Q  K + +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 132 EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 191
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 192 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 251
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 252 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 311
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 312 LDSDKLVLTPAAVEYLNERYGINYEEGIEDEEEE 343
           L++DKLVLTPAAVE+LN RYG++  E  +D+E+E
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDE 275

[Close]
BLAST of CaUC06G122430 vs. TAIR 10
Match: AT1G07320.4 (ribosomal protein L4 )

HSP 1 Score: 364.0 bits (933), Expect = 1.8e-100
Identity = 191/274 (69.71%), Postives = 232/274 (84.67%), Query Frame = 0 

Query: 72  AASTTPLSLSFFTSSVFLSSPNLQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFTG 131
           +++T P SLSFF+SS+FLSS + Q  K + +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 132 EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 191
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 192 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 251
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 252 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 311
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 312 LDSDKLVLTPAAVEYLNERYGINYEEGIEDEEEE 343
           L++DKLVLTPAAVE+LN RYG++  E  +D+E+E
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDE 275

[Close]
BLAST of CaUC06G122430 vs. TAIR 10
Match: AT2G20060.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 90.5 bits (223), Expect = 3.8e-18
Identity = 84/295 (28.47%), Postives = 146/295 (49.49%), Query Frame = 0 

Query: 46  ASISLSLREWITKLSAELSSSIAPTMAASTTPLSLSFFTSSVFLSSPNLQNSKLFCN-WK 105
           ASIS  +       SA L  S +P ++A+T+   L+  T+ +      L N KL  +   
Sbjct: 3   ASISRRIFRTFGSFSA-LGRSSSPNLSANTSGNGLASLTNDLKYGMALLSNRKLSTSILT 62

Query: 106 PNSLKPQ---TKPLSISSELA-------TLPVLSFTGEKVGETYLDLKSAPPETARAVVH 165
           P+   P    TK   ++ +          +PV +F  E+ G   L          + ++H
Sbjct: 63  PDDSFPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVLAGDVFDVPIRKDIIH 122

Query: 166 RAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTGKARRGSMRTPLRPGGGVVFGPKP 225
             +      +++GT ST T +EVSG GRKP+ QK TG+AR G++R P   GG V+ GPKP
Sbjct: 123 NVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGCVMHGPKP 182

Query: 226 RDWSIKINRKEKRLAISTAVASAAV--NTIVVEDFGDKFEKPKTKEFIAALKRWGIDPKE 285
           R  +IK+N++ +RL +  A+ + A     +V +D G      KTK  +    +   + K+
Sbjct: 183 RSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLG--LPTHKTKNIVNYYNQME-NTKK 242

Query: 286 KSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPAAVEYLNER 328
             +     + + ++L+++N+  + ++    LN++ IL  D L+++  AV  + ER
Sbjct: 243 VLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLLMSRDAVNKIVER 293

The following BLAST results are available for this feature:
BLAST of CaUC06G122430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902816.12.8e-14096.4250S ribosomal protein L4, chloroplastic [Benincasa hispida][more]
XP_023532270.17.8e-13894.6250S ribosomal protein L4, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022148353.11.0e-13793.9150S ribosomal protein L4, chloroplastic [Momordica charantia][more]
XP_022948155.12.3e-13793.2650S ribosomal protein L4, chloroplastic-like isoform X2 [Cucurbita moschata][more]
XP_022948154.12.9e-13794.2750S ribosomal protein L4, chloroplastic-like isoform X1 [Cucurbita moschata] >KA... [more]
BLAST of CaUC06G122430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O500611.9e-9969.2950S ribosomal protein L4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL4 ... [more]
O803619.6e-9971.2250S ribosomal protein L4, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL4 PE=... [more]
O499376.7e-9263.5750S ribosomal protein L4, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL4 PE=... [more]
Q8DMN07.7e-5653.9250S ribosomal protein L4 OS=Thermosynechococcus elongatus (strain BP-1) OX=19722... [more]
B0JI022.9e-5551.9650S ribosomal protein L4 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 G... [more]
BLAST of CaUC06G122430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D3V74.9e-13893.9150S ribosomal protein L4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1G8Y31.1e-13793.2650S ribosomal protein L4, chloroplastic-like isoform X2 OS=Cucurbita moschata OX... [more]
A0A6J1G9171.4e-13794.2750S ribosomal protein L4, chloroplastic-like isoform X1 OS=Cucurbita moschata OX... [more]
A0A5A7V3J21.9e-13794.6050S ribosomal protein L4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CM351.9e-13794.6050S ribosomal protein L4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LO... [more]
BLAST of CaUC06G122430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07320.11.4e-10069.29ribosomal protein L4 [more]
AT1G07320.21.8e-10069.06ribosomal protein L4 [more]
AT1G07320.31.8e-10069.71ribosomal protein L4 [more]
AT1G07320.41.8e-10069.71ribosomal protein L4 [more]
AT2G20060.13.8e-1828.47Ribosomal protein L4/L1 family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR01300550S ribosomal protein uL4TIGRFAMTIGR03953TIGR03953coord: 147..326
e-value: 2.4E-57
score: 191.3
IPR01300550S ribosomal protein uL4PANTHERPTHR1074650S RIBOSOMAL PROTEIN L4coord: 65..342
IPR01300550S ribosomal protein uL4HAMAPMF_01328_BRibosomal_L4_Bcoord: 129..329
score: 29.579786
IPR023574Ribosomal protein L4 domain superfamilyGENE3D3.40.1370.10coord: 108..336
e-value: 7.8E-61
score: 207.1
IPR023574Ribosomal protein L4 domain superfamilySUPERFAMILY52166Ribosomal protein L4coord: 123..329
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 148..327
e-value: 1.3E-53
score: 181.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..207
NoneNo IPR availablePANTHERPTHR10746:SF639S RIBOSOMAL PROTEIN L4, MITOCHONDRIALcoord: 65..342

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G122430.1CaUC06G122430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome