CaUC06G122050 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G122050
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Replication termination factor 2
Location	Ciama_Chr06: 27149411 .. 27150571 (-)
RNA-Seq Expression	CaUC06G122050
Synteny	CaUC06G122050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCCGAAAAATCAACACCGTCTTCAGATCTTCCTTCATTCTCCCGACCTTCCAATTCAATCCAAAATCGTAAACCTACCACAAACTCCGGCCCAAACCCTAGAGGATCTGAAATTCTCTCTTCTCCCTGAAACCCTCAATTCACGGGTTGCGTCCTCTTTCTACTTCACCCTCAATGGGAAACCCCTTCTCAATTCCACCACGATTCCCAGTTCTCTAATTCCCCCTCTCTCTACCTTAATCTTAAGAACCAGGGTCCTTGGGGGTGGTGGTGATGGCGGTGCAACAGGGGCCGAATCTCGTGACTGTTATCTTAATATGTACGCAGAGAAGAAACCCGATAAAGTCGACCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATGTCTTCAATAAGGAGTCGCTCGTGCAGGCTTTGCTAGAGAAGAAACTGCCAAAAGGATTCGGGCATATCAAAGGTTTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCTGGTACAGAATCGCGTGGGAATGCAATGTCAGAGCCGCGGTTTCAATGTCCGATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTTTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTAAGGACAGAGATAAGTTTGTGATCAATGGGAGTGAGGAGGAGGTAGAAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAGGAGAAGAAGATGAAGAAAGTGAGGAATGGGGAAGTGGGTATGAAAGGAGATGTGAGTTTGGATATGGCAGCATCCCGCTTGTCTGGTAAAAAGCACGGCATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAACCTGAAAGACATGAGCGGCCAGATGGTGGAGTTCAGGTAAAGGTTGCAGCAAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTGA

mRNA sequence

ATGCATCCGAAAAATCAACACCGTCTTCAGATCTTCCTTCATTCTCCCGACCTTCCAATTCAATCCAAAATCGTAAACCTACCACAAACTCCGGCCCAAACCCTAGAGGATCTGAAATTCTCTCTTCTCCCTGAAACCCTCAATTCACGGGTTGCGTCCTCTTTCTACTTCACCCTCAATGGGAAACCCCTTCTCAATTCCACCACGATTCCCAGTTCTCTAATTCCCCCTCTCTCTACCTTAATCTTAAGAACCAGGGTCCTTGGGGGTGGTGGTGATGGCGGTGCAACAGGGGCCGAATCTCGTGACTGTTATCTTAATATGTACGCAGAGAAGAAACCCGATAAAGTCGACCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATGTCTTCAATAAGGAGTCGCTCGTGCAGGCTTTGCTAGAGAAGAAACTGCCAAAAGGATTCGGGCATATCAAAGGTTTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCTGGTACAGAATCGCGTGGGAATGCAATGTCAGAGCCGCGGTTTCAATGTCCGATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTTTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTAAGGACAGAGATAAGTTTGTGATCAATGGGAGTGAGGAGGAGGTAGAAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAGGAGAAGAAGATGAAGAAAGTGAGGAATGGGGAAGTGGGTATGAAAGGAGATGTGAGTTTGGATATGGCAGCATCCCGCTTGTCTGGTAAAAAGCACGGCATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAACCTGAAAGACATGAGCGGCCAGATGGTGGAGTTCAGGTAAAGGTTGCAGCAAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTGA

Coding sequence (CDS)

ATGCATCCGAAAAATCAACACCGTCTTCAGATCTTCCTTCATTCTCCCGACCTTCCAATTCAATCCAAAATCGTAAACCTACCACAAACTCCGGCCCAAACCCTAGAGGATCTGAAATTCTCTCTTCTCCCTGAAACCCTCAATTCACGGGTTGCGTCCTCTTTCTACTTCACCCTCAATGGGAAACCCCTTCTCAATTCCACCACGATTCCCAGTTCTCTAATTCCCCCTCTCTCTACCTTAATCTTAAGAACCAGGGTCCTTGGGGGTGGTGGTGATGGCGGTGCAACAGGGGCCGAATCTCGTGACTGTTATCTTAATATGTACGCAGAGAAGAAACCCGATAAAGTCGACCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATGTCTTCAATAAGGAGTCGCTCGTGCAGGCTTTGCTAGAGAAGAAACTGCCAAAAGGATTCGGGCATATCAAAGGTTTGAAGGATATGATCAAGATTAATCTTTCGGTGATTCCTGGTACAGAATCGCGTGGGAATGCAATGTCAGAGCCGCGGTTTCAATGTCCGATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTTTGAGAACTTGTGGACATGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTAAGGACAGAGATAAGTTTGTGATCAATGGGAGTGAGGAGGAGGTAGAAGAAATGAGGGAGAGGATGGAGGAAGAGAAATCGAAATCGAAGGAGAAGAAGATGAAGAAAGTGAGGAATGGGGAAGTGGGTATGAAAGGAGATGTGAGTTTGGATATGGCAGCATCCCGCTTGTCTGGTAAAAAGCACGGCATTGAAGTTAAGGCTTTGGAGAAGGTTTCTGCTAAACCTGAAAGACATGAGCGGCCAGATGGTGGAGTTCAGGTAAAGGTTGCAGCAAGTAATGGTGCTGTAAAGCGTTTCAAAGCAGCAGACATGGTCCCTGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTGA

Protein sequence

MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLNGKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLGRN

Homology

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BLAST of CaUC06G122050 vs. NCBI nr
Match: XP_038879920.1 (replication termination factor 2 [Benincasa hispida])

HSP 1 Score: 709.9 bits (1831), Expect = 1.2e-200
Identity = 365/388 (94.07%), Postives = 375/388 (96.65%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKN+HRLQIFLHS DL IQS+IVNLPQ+PAQTLEDLKFSLLPETL SRVASSFYFTLN
Sbjct: 1   MHPKNEHRLQIFLHSLDLQIQSQIVNLPQSPAQTLEDLKFSLLPETLASRVASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPL +STTIPSSL+PPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLPDSTTIPSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSVIPGTESRGNA+SEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSVIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSK--SKEKKMKKVRNGEVGMKGDVSLDMA 300
           CHAEF +RDKFVINGSEEEVEEMRERMEEEKSK  SKEKK KKVRN E G+ GD+S+D A
Sbjct: 241 CHAEFTNRDKFVINGSEEEVEEMRERMEEEKSKSRSKEKKTKKVRNEEGGINGDMSVDFA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
           ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 388

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BLAST of CaUC06G122050 vs. NCBI nr
Match: XP_008444038.1 (PREDICTED: protein RTF2 homolog [Cucumis melo] >KAA0035058.1 protein RTF2-like protein [Cucumis melo var. makuwa] >TYK03620.1 protein RTF2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 693.3 bits (1788), Expect = 1.1e-195
Identity = 358/388 (92.27%), Postives = 369/388 (95.10%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHRLQIFLHSPDL IQSKIV+LPQT A+TLEDLKFSLL ETL SRVASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CH EF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDV++D+A
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKHGIE++ LEKVSAKPERHER DGG QVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

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BLAST of CaUC06G122050 vs. NCBI nr
Match: XP_011655923.1 (replication termination factor 2 [Cucumis sativus] >KGN65240.1 hypothetical protein Csa_019614 [Cucumis sativus])

HSP 1 Score: 688.3 bits (1775), Expect = 3.7e-194
Identity = 355/388 (91.49%), Postives = 367/388 (94.59%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHR QIFL SPDL I+SKIVNLPQTPA+TLEDLKFSLL E L SR+ASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CHAEF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDVS+D+A
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKH IEVK+LEKVSAKPER ER DGG QVK A SNGAVKRFKAADMVPANATKE
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

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BLAST of CaUC06G122050 vs. NCBI nr
Match: XP_022933589.1 (protein RTF2 homolog [Cucurbita moschata])

HSP 1 Score: 675.2 bits (1741), Expect = 3.2e-190
Identity = 344/386 (89.12%), Postives = 360/386 (93.26%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           M+PKNQHRLQ F+HSPDL IQSKIVNL QT AQ+L DLK SL+  T  SR+ASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+S TI SSL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLS++PGTESRGNA+SE RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAAS 300
           CHAEF DRDKFVINGSEEEV  MRERMEEEK+KSKEKK KKVR GEVGM GDVS+D+A+S
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIE KAL KVSAKPE+HERPD GVQVKVAASNGAVKRFKAADM PANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CaUC06G122050 vs. NCBI nr
Match: XP_022135450.1 (protein RTF2 homolog [Momordica charantia])

HSP 1 Score: 674.9 bits (1740), Expect = 4.2e-190
Identity = 343/386 (88.86%), Postives = 363/386 (94.04%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQ RLQIF+HSPDL IQSKI+NL +T AQTLEDLKFSLLP+TL  R ASSFYFTLN
Sbjct: 1   MHPKNQQRLQIFVHSPDLQIQSKILNLARTSAQTLEDLKFSLLPQTLAPRSASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+ST + SSLI PLSTLILRTR+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTPVTSSLISPLSTLILRTRIHGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGH+KGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHVKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           +LS IPGTES  NA+S PRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 SLSAIPGTESGSNAISGPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAAS 300
           CHAEFKDRDK VINGSEEEV  +RERMEEEKSKSKEK++KKV+NGEVGM GDVS+D+A+S
Sbjct: 241 CHAEFKDRDKLVINGSEEEVAVLRERMEEEKSKSKEKRLKKVKNGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIEVKA EKVSAK ER+ERPDGG+QVKVAA+NGAVKRFKAADM P NATKEVY
Sbjct: 301 RLSGKKHGIEVKASEKVSAKLERNERPDGGIQVKVAANNGAVKRFKAADMAPPNATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CaUC06G122050 vs. ExPASy Swiss-Prot
Match: Q3T1J8 (Replication termination factor 2 OS=Rattus norvegicus OX=10116 GN=Rtf2 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.3e-34
Identity = 99/271 (36.53%), Postives = 149/271 (54.98%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HI+ +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  TSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG++E+VE ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAKLEKK 198

Query: 292 MKKVRNGEVGMKGDVSLDMA--ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVA 351
            KK +  E   K  +S D A  +   +GK    +    EK S+   R    +G    KV 
Sbjct: 199 TKKPKTAESASKLGISQDSAGPSKAKAGKSEEADPDPREKKSSLAPRGTASNGSASGKVG 258

Query: 352 ASN-GAVKRFKAADMVPANATKEVYASIFTS 367
               GA+KR      +  +   E Y SIFTS
Sbjct: 259 KPPCGALKR-----SIADSEESETYKSIFTS 284

[Close]

BLAST of CaUC06G122050 vs. ExPASy Swiss-Prot
Match: Q99K95 (Replication termination factor 2 OS=Mus musculus OX=10090 GN=Rtf2 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-32
Identity = 99/272 (36.40%), Postives = 148/272 (54.41%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HI+ +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG++E+VE +++RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRAKLEKK 198

Query: 292 MKKVRNG-EVGMKGDVSLDMA--ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKV 351
            KK +   E   K   + D A  +   SGK    +    EK S    R    +G    KV
Sbjct: 199 TKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKSTPAPRGAATNGSASGKV 258

Query: 352 AASN-GAVKRFKAADMVPANATKEVYASIFTS 367
                GA+KR      +  +   E Y SIFTS
Sbjct: 259 GKPPCGALKR-----SIADSEESETYKSIFTS 285

[Close]

BLAST of CaUC06G122050 vs. ExPASy Swiss-Prot
Match: Q5R9P9 (Replication termination factor 2 OS=Pongo abelii OX=9601 GN=RTF2 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.6e-30
Identity = 99/284 (34.86%), Postives = 152/284 (53.52%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG++E+V+ ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAKLEKK 198

Query: 292 MKKVRNGEVGMKGDVSLDM--AASRLSGKKHGIEVKALEK---VSAKPERHERPDGGVQV 351
            KK +  E   K DVS +    +   +GK     + + EK   ++ K         G   
Sbjct: 199 TKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTATNESSSGKAG 258

Query: 352 KVAASNGAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
           K     GA KR      +  +   E Y S+FT  SS K   +E+
Sbjct: 259 KPPC--GATKR-----SIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]

BLAST of CaUC06G122050 vs. ExPASy Swiss-Prot
Match: Q9BY42 (Replication termination factor 2 OS=Homo sapiens OX=9606 GN=RTF2 PE=1 SV=3)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-29
Identity = 98/284 (34.51%), Postives = 152/284 (53.52%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  ++NG++E+V+ ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAKLEKK 198

Query: 292 MKKVRNGEVGMKGDVSLDM--AASRLSGKKHGIEVKALEK---VSAKPERHERPDGGVQV 351
            KK +  E   K DVS +    +   +GK     + + EK   ++ K         G   
Sbjct: 199 TKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTAMNESSSGKAG 258

Query: 352 KVAASNGAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
           K     GA KR      +  +   E Y S+FT  SS K   +E+
Sbjct: 259 KPPC--GATKR-----SIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]

BLAST of CaUC06G122050 vs. ExPASy Swiss-Prot
Match: Q4R594 (Replication termination factor 2 OS=Macaca fascicularis OX=9541 GN=RTF2 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-29
Identity = 97/282 (34.40%), Postives = 150/282 (53.19%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSVIPGTE-SRGNA-------MSEPRFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSK-EKK 291
            CG V S +ALKE+K+  C  C A F++ D  V+NG+ E+V+ ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARMEERRLRAKLEKK 198

Query: 292 MKKVRNGEVGMKGDVSLDM--AASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVA 351
            KK +  E   K DVS +    +   +GK     + + EK +    +    +     K  
Sbjct: 199 TKKPKAAESVSKPDVSEEAPGPSKVKTGKPEETSLDSREKKNNLAPKSAATNESFSGKAG 258

Query: 352 AS-NGAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
               GA KR      +  +   E Y S+FT  SS K   +E+
Sbjct: 259 KPLCGATKR-----SIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]

BLAST of CaUC06G122050 vs. ExPASy TrEMBL
Match: A0A5A7SWS4 (Replication termination factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00470 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 5.6e-196
Identity = 358/388 (92.27%), Postives = 369/388 (95.10%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHRLQIFLHSPDL IQSKIV+LPQT A+TLEDLKFSLL ETL SRVASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CH EF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDV++D+A
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKHGIE++ LEKVSAKPERHER DGG QVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CaUC06G122050 vs. ExPASy TrEMBL
Match: A0A1S3B9F3 (Replication termination factor 2 OS=Cucumis melo OX=3656 GN=LOC103487489 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 5.6e-196
Identity = 358/388 (92.27%), Postives = 369/388 (95.10%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHRLQIFLHSPDL IQSKIV+LPQT A+TLEDLKFSLL ETL SRVASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CH EF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDV++D+A
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKHGIE++ LEKVSAKPERHER DGG QVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CaUC06G122050 vs. ExPASy TrEMBL
Match: A0A0A0LTI5 (Replication termination factor 2 OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=3 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.8e-194
Identity = 355/388 (91.49%), Postives = 367/388 (94.59%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQHR QIFL SPDL I+SKIVNLPQTPA+TLEDLKFSLL E L SR+ASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+STTI  SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNA+SEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEE--KSKSKEKKMKKVRNGEVGMKGDVSLDMA 300
           CHAEF +RDKFVINGSEEEVEEMRERMEEE  KSKSKEKK KKVRNGEVGM GDVS+D+A
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKH IEVK+LEKVSAKPER ER DGG QVK A SNGAVKRFKAADMVPANATKE
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CaUC06G122050 vs. ExPASy TrEMBL
Match: A0A6J1F067 (Replication termination factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111440971 PE=3 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.6e-190
Identity = 344/386 (89.12%), Postives = 360/386 (93.26%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           M+PKNQHRLQ F+HSPDL IQSKIVNL QT AQ+L DLK SL+  T  SR+ASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+S TI SSL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLS++PGTESRGNA+SE RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAAS 300
           CHAEF DRDKFVINGSEEEV  MRERMEEEK+KSKEKK KKVR GEVGM GDVS+D+A+S
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIE KAL KVSAKPE+HERPD GVQVKVAASNGAVKRFKAADM PANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CaUC06G122050 vs. ExPASy TrEMBL
Match: A0A6J1C136 (Replication termination factor 2 OS=Momordica charantia OX=3673 GN=LOC111007406 PE=3 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.0e-190
Identity = 343/386 (88.86%), Postives = 363/386 (94.04%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSFYFTLN 60
           MHPKNQ RLQIF+HSPDL IQSKI+NL +T AQTLEDLKFSLLP+TL  R ASSFYFTLN
Sbjct: 1   MHPKNQQRLQIFVHSPDLQIQSKILNLARTSAQTLEDLKFSLLPQTLAPRSASSFYFTLN 60

Query: 61  GKPLLNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLL+ST + SSLI PLSTLILRTR+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTPVTSSLISPLSTLILRTRIHGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGH+KGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHVKGLKDMIKI 180

Query: 181 NLSVIPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           +LS IPGTES  NA+S PRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 SLSAIPGTESGSNAISGPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKKMKKVRNGEVGMKGDVSLDMAAS 300
           CHAEFKDRDK VINGSEEEV  +RERMEEEKSKSKEK++KKV+NGEVGM GDVS+D+A+S
Sbjct: 241 CHAEFKDRDKLVINGSEEEVAVLRERMEEEKSKSKEKRLKKVKNGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIEVKA EKVSAK ER+ERPDGG+QVKVAA+NGAVKRFKAADM P NATKEVY
Sbjct: 301 RLSGKKHGIEVKASEKVSAKLERNERPDGGIQVKVAANNGAVKRFKAADMAPPNATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CaUC06G122050 vs. TAIR 10
Match: AT5G58020.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). )

HSP 1 Score: 395.6 bits (1015), Expect = 4.6e-110
Identity = 230/386 (59.59%), Postives = 265/386 (68.65%), Query Frame = 0


Query: 8   RLQIFLHSPDLPIQSKIVNLPQTPAQTLEDLKFSLLPETLNSRVASSF---YFTLNGKPL 67
           R QIF+ SPD     K+V L   PAQ+L  L  S +   L S    SF     TL+GK L
Sbjct: 4   RRQIFVKSPDC---QKVVALQLDPAQSL--LTLSGITSLLESSQRISFSACSITLDGKLL 63

Query: 68  LNSTTIPSSLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 127
             ST I  S +P +S L L  R+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL
Sbjct: 64  NGSTRIQVSKLPSVSMLTLFPRLRGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 123

Query: 128 SKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINLSV 187
           SKWLNCALSNEPL EPCVID LGN+FNKE LV ALL K+LPK F +IKGLKDM+ I L+ 
Sbjct: 124 SKWLNCALSNEPLAEPCVIDLLGNLFNKEVLVHALLSKRLPKQFSYIKGLKDMVNIKLTP 183

Query: 188 IPGTESRGNAMSEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAE 247
           + G++      +  +FQCP++GLEFNGKYKFFALR CGHV+SAKALKEVKSSSCLVCHA+
Sbjct: 184 VAGSDGSSQDTTSAQFQCPVSGLEFNGKYKFFALRGCGHVMSAKALKEVKSSSCLVCHAD 243

Query: 248 FKDRDKFVINGSEEEVEEMRERMEEEKSKSKEKK--MKKVRNGEVGMKGDVSLDMAASRL 307
            KD DK VING+EEEV+ +RERMEEEK+K +EKK   KK +NG                 
Sbjct: 244 VKDSDKIVINGTEEEVDLLRERMEEEKAKLREKKGVSKKSKNG----------------- 303

Query: 308 SGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNG-AVKRFKAADMVPANATKEVYA 367
                      +    AK  + +  DG V       NG  VK+FKAAD VP NATKEVYA
Sbjct: 304 --------AAVVADTGAKVAKRQIEDGNVN-----GNGITVKKFKAADKVPVNATKEVYA 354

Query: 368 SIFTSS-RKSDFKETYSCRSLPLGRN 387
           S+FTSS +KSDF+ETYSCRSLPLGRN
Sbjct: 364 SLFTSSKKKSDFRETYSCRSLPLGRN 354

The following BLAST results are available for this feature:

BLAST of CaUC06G122050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879920.1	1.2e-200	94.07	replication termination factor 2 [Benincasa hispida]	[more]
XP_008444038.1	1.1e-195	92.27	PREDICTED: protein RTF2 homolog [Cucumis melo] >KAA0035058.1 protein RTF2-like p...	[more]
XP_011655923.1	3.7e-194	91.49	replication termination factor 2 [Cucumis sativus] >KGN65240.1 hypothetical prot...	[more]
XP_022933589.1	3.2e-190	89.12	protein RTF2 homolog [Cucurbita moschata]	[more]
XP_022135450.1	4.2e-190	88.86	protein RTF2 homolog [Momordica charantia]	[more]

BLAST of CaUC06G122050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T1J8	5.3e-34	36.53	Replication termination factor 2 OS=Rattus norvegicus OX=10116 GN=Rtf2 PE=2 SV=1	[more]
Q99K95	2.9e-32	36.40	Replication termination factor 2 OS=Mus musculus OX=10090 GN=Rtf2 PE=1 SV=1	[more]
Q5R9P9	4.6e-30	34.86	Replication termination factor 2 OS=Pongo abelii OX=9601 GN=RTF2 PE=2 SV=1	[more]
Q9BY42	1.0e-29	34.51	Replication termination factor 2 OS=Homo sapiens OX=9606 GN=RTF2 PE=1 SV=3	[more]
Q4R594	1.0e-29	34.40	Replication termination factor 2 OS=Macaca fascicularis OX=9541 GN=RTF2 PE=2 SV=...	[more]

BLAST of CaUC06G122050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SWS4	5.6e-196	92.27	Replication termination factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B9F3	5.6e-196	92.27	Replication termination factor 2 OS=Cucumis melo OX=3656 GN=LOC103487489 PE=3 SV...	[more]
A0A0A0LTI5	1.8e-194	91.49	Replication termination factor 2 OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=3...	[more]
A0A6J1F067	1.6e-190	89.12	Replication termination factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111440971 P...	[more]
A0A6J1C136	2.0e-190	88.86	Replication termination factor 2 OS=Momordica charantia OX=3673 GN=LOC111007406 ...	[more]

BLAST of CaUC06G122050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58020.1	4.6e-110	59.59	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..284
None	No IPR available	PFAM	PF04641	Rtf2	coord: 90..370 e-value: 2.8E-74 score: 249.8
None	No IPR available	PANTHER	PTHR12775:SF1	BNACNNG39770D PROTEIN	coord: 7..297
None	No IPR available	PANTHER	PTHR12775:SF1	BNACNNG39770D PROTEIN	coord: 333..386
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 7..297
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 333..386
IPR027799	Replication termination factor 2, RING-finger	CDD	cd16653	RING-like_Rtf2	coord: 200..245 e-value: 1.6375E-26 score: 98.0819

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G122050.1	CaUC06G122050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902979	mitotic DNA replication termination
cellular_component	GO:0005634	nucleus