Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTATTAGCATTTAGCGCGACTATGTAAGCCCGCTCCGTGTCCCCATCATTCTTCGTCACTACCATTTTGGCGGCAAAATTTCATCTTGGGAGCTTCCATTCATCTCTCCATTTGAATTTCCTCTTCATTTTCTTCATTGGGGAACAAGCTTTTTTCAGGAGGCGAAAGGGTAATTTTGATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCGTATTGTTCTTTCTGTTTCCATCTCTTCAACATAGGTTTTCAATTTTGTTCGGTTAATTTTATTGATTCTTGTCAATTCCTTTTCCCTTCAGACAAGCATCGGCCGCCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGTAAGGTTTAATTTGTATTATATTACTTGGCATATTCTTATCAGCCGTCAATTTCTGATTTCTTAAGTTTGTGCTCTTAAGCACTTCTTTGAATTGTTCCGATTTTCTTTGAACAAAATTGTTTTCTTGCCTCGTTTCTGTAGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAGTACTGTCTCAATCACTGTTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCAAATGTAGGTTTTTCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATGTCGAAGTCCGCATCAGTATCGAAATTACAAGTTATAGTTTATCAATTGAATATCAATATCGACAGATATTTGTGTAAATCAACAAGTTTATCCAAAAAAAAAAAATTAAATTAATAATTAAGTTATTTTTGCTTTCAAAGAAGTTGTAGTTCTTATTGAGATTAATAGATGACAGCTTCTTATTTTTTTATATATTTATAAAAGATACCGAGATGTCTATAAACCCTTAATATCAATGTCAAATCTTCCTATTTATAGATATATCAACATATCAACAAATAATTGAAACCTTGTCTGTGCTTTGTTACGTGAAGTTGCTCTATTAGTGTTGTTTTTATAACTGAATTAGTGGCCCTCTATGTCCGAATCATTTCACAAGCGATTAATAATTGAGTATGTAAAATGGCTGCTTGTTGATTTTGCGAGTTTCCCACTTCTTGTGTACTGATTAGAGAGCTTCCTCAAATTTTGGTTCTGGGGCGAAATTTTTTTTGGAACTTTGGAGAAATGTGCATCATCAAGTTTCAAGTTTTTTACAAGATATACTCATTGTTTAGATCCAGTTTCGAGTTTCCATATTTTCTGACCTTAGAGCTTCCACATTTTGTTTGCTATAAATCAATGTGGTTCCATTGTCACTAGAAATATGGTCATGATGGTAAAATATTGTTTTTAGCTCTAAAAGGAATGTAAGCAAATGTCTGCAGAATTTTTTAGAAAATCTGTCGTTGGTGCATCATGGCTTTTCTTTTTCAATCATTTTTTGAAGTCTAAACTATGTGAATTCCAGTTCGACTCCTTTCATTTTGAACCAATATAGTCACTTGGGGTTGGGCAATCTCTGTCTGTTTCACTGGCATCTCAATGGAATCTGCGATATCTTATTGTCAAGTTGCTAAATTATCAATGGTTCCCATATTCTGTTTGTGAACTTTGAGTTATGGTTAATTGAGTCTATGTACTCTCTTACTACTTTTTCTTTTTTCTAATGCAATAAACATATTTCTGATTCAGATCTAAATATTTTCTTTAAGTTGTCTTAGGATGAATCACCTGGTGTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGTATTGAGTGTGTCGTATGTTAATTACTTTTTGTGTTTATGTATATCATATTTCATGAGGAAATGTATTTTTCAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGGTAATTAAATTGTGCTTAATTAAAATCATTTTTCTCTTCCTGCACTCCTGGGTTTACTTGCGCCCTACTCTACTAGTATACTCATGAAGGCATACTCGAAATGAAATATACAAATAATGTATGAAGCTGTTTTTTCTTATAATGAACCTTTATTGTCATAGTCAGCTTGGTAGAGCAAAGTTTCTGTAAACACTAACCTTCTCTCTGACGGATCAATCTGGCCTGCATATCTCATGGTGACACAAATTCTAATAGTTCCAAATGATACTTCTTATTGAACACCTGCAAAATCATTTCATTTAGGCAATTTTTAGATTACCCTAAAGTAAACTCTAGTAGTCCCATTTTCTGTTGTCCATTCCATAAAAGAGGAACTTCAGTATGTGAATAAGGCAATTTATTTTCCTATTTTCATTTTGAAGGCCACTTGGACAAAATTTATTCACTAGTATTAAATTTCATTGTACTGAAATTTTAACGGTTGGCTGGTCATTTGGGGTTTGTGCTATTTTGTGGGATATTTGGGAGAAGACAAATAACAAAGTGTTTAGAGGTGTGGCTGAACCATGGTGATGTTTGGTCCTTGGTGAGGTTTCATGTTTCTCTTTAAAATTCAGTTTCAAAAACCTTTTGTAACCATCCTCTAGATAGTGTCTTATTTAGTTGGAAACCCTTCCTATAGAGGGGTTTTGCAGGCTTGTCCTTTTTGTTGTCTTGTATTCTTCATTTTTTATCTATAAAAACCGTTTTCCCTATCAAACTTCAATGGTTGGCAAGTTAAAGCTGTTCATGATTTTAGGAAGCAGACTTCTTATGCATATCAACTTCTTGCAGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTAGTAGGATTTTCAAGCTACTTTATTATCATTTTAGCTTTCTGGAAGTTGAATTTCATCTCACATGCTGGTTGATACTTGTTTCTGTTCTGTAGGTTTCTCTAATGCTAAGCTGGATGACATTCAAGAATTCTTAGCTGATTTGAAGACCCTT
mRNA sequence
ATTTATTAGCATTTAGCGCGACTATGTAAGCCCGCTCCGTGTCCCCATCATTCTTCGTCACTACCATTTTGGCGGCAAAATTTCATCTTGGGAGCTTCCATTCATCTCTCCATTTGAATTTCCTCTTCATTTTCTTCATTGGGGAACAAGCTTTTTTCAGGAGGCGAAAGGGTAATTTTGATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCACAAGCATCGGCCGCCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAGTACTGTCTCAATCACTGTTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCAAATGATGAATCACCTGGTGTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGTATTGAGTGTGTCGTATGTTAATTACTTTTTGTGTTTATGTATATCATATTTCATGAGGAAATGTATTTTTCAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGACATTCAAGAATTCTTAGCTGATTTGAAGACCCTT
Coding sequence (CDS)
ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCACAAGCATCGGCCGCCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAGTACTGTCTCAATCACTGTTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCAAATGATGAATCACCTGGTGTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGTATTGAGTGTGTCGTATGTTAATTACTTTTTGTGTTTATGTATATCATATTTCATGAGGAAATGTATTTTTCAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGACATTCAAGAATTCTTAGCTGATTTGAAGACCCTT
Protein sequence
MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTLGISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHDYDVDLDTELDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL
Homology
BLAST of CaUC06G121850 vs. NCBI nr
Match:
XP_038879945.1 (protein MIS12 homolog [Benincasa hispida])
HSP 1 Score: 425.6 bits (1093), Expect = 3.1e-115
Identity = 225/264 (85.23%), Postives = 233/264 (88.26%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGEAVFDSLNLNPQLFINEALNIVDDL+DDAF FYQSQASA LKTEGSDRSQDLTL
Sbjct: 31 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLVDDAFGFYQSQASATLKTEGSDRSQDLTL 90
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHDYDVDLDTE 120
GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSND+SPGVTSISHDYDV LDTE
Sbjct: 91 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDDSPGVTSISHDYDVGLDTE 150
Query: 121 LDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSNSQ 180
LDFLRNKLSEV RKENIVL+QELQALERQTA+SNSQ
Sbjct: 151 LDFLRNKLSEV-------------------------RKENIVLNQELQALERQTATSNSQ 210
Query: 181 INHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDIS 240
INHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEE+KL+KVEKVHTNGDIS
Sbjct: 211 INHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDIS 269
Query: 241 HHHNGFSNAKLDDIQEFLADLKTL 265
H+HNG SNAKLDDI+ FL DLKTL
Sbjct: 271 HYHNGLSNAKLDDIKIFLDDLKTL 269
BLAST of CaUC06G121850 vs. NCBI nr
Match:
KAA0058004.1 (Centromere protein Mis12 [Cucumis melo var. makuwa] >TYK28378.1 Centromere protein Mis12 [Cucumis melo var. makuwa])
HSP 1 Score: 417.5 bits (1072), Expect = 8.3e-113
Identity = 219/264 (82.95%), Postives = 233/264 (88.26%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASAALKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHDYDVDLDTE 120
GIS+VRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSI+HD DVDLDTE
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDTE 120
Query: 121 LDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSNSQ 180
LD LRNKLSEV RKENIVL+QELQALERQTASSNSQ
Sbjct: 121 LDLLRNKLSEV-------------------------RKENIVLNQELQALERQTASSNSQ 180
Query: 181 INHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDIS 240
I+HFNEALQLYEQ+SVN+MFQEM+ TASELRAKIGK+KKRR EEAKL+KVEKVHTNGDIS
Sbjct: 181 ISHFNEALQLYEQSSVNDMFQEMIKTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDIS 239
Query: 241 HHHNGFSNAKLDDIQEFLADLKTL 265
HHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 241 HHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CaUC06G121850 vs. NCBI nr
Match:
XP_023515499.1 (protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 416.8 bits (1070), Expect = 1.4e-112
Identity = 220/266 (82.71%), Postives = 231/266 (86.84%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL+L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHD--YDVDLD 120
GISRVR VQ GLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP VTS+S D YDVDLD
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
Query: 121 TELDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSN 180
TELDFLRNKLSEV RKEN+VL+QELQALERQTASSN
Sbjct: 121 TELDFLRNKLSEV-------------------------RKENVVLNQELQALERQTASSN 180
Query: 181 SQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGD 240
SQ+N FNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGD
Sbjct: 181 SQVNRFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGD 240
Query: 241 ISHHHNGFSNAKLDDIQEFLADLKTL 265
ISHHH GFSNAKLDDIQEFLADLKTL
Sbjct: 241 ISHHHKGFSNAKLDDIQEFLADLKTL 241
BLAST of CaUC06G121850 vs. NCBI nr
Match:
KAA0058032.1 (Centromere protein Mis12 [Cucumis melo var. makuwa])
HSP 1 Score: 414.8 bits (1065), Expect = 5.4e-112
Identity = 217/264 (82.20%), Postives = 232/264 (87.88%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASA LKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASATLKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHDYDVDLDTE 120
GIS+VRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSI+HD DVDLDTE
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDTE 120
Query: 121 LDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSNSQ 180
LD LRNKLSEV RKENIVL+QELQALERQTASSNSQ
Sbjct: 121 LDLLRNKLSEV-------------------------RKENIVLNQELQALERQTASSNSQ 180
Query: 181 INHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDIS 240
I+HFNEALQLYEQ+SVN+MFQEM+ TASELR+KIGK+KKRR EEAKL+KVEKVHTNGDIS
Sbjct: 181 ISHFNEALQLYEQSSVNDMFQEMIKTASELRSKIGKMKKRRTEEAKLAKVEKVHTNGDIS 239
Query: 241 HHHNGFSNAKLDDIQEFLADLKTL 265
HHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 241 HHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CaUC06G121850 vs. NCBI nr
Match:
KAG6589575.1 (Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 414.1 bits (1063), Expect = 9.2e-112
Identity = 219/266 (82.33%), Postives = 229/266 (86.09%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHD--YDVDLD 120
GISRVR VQ GLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP VTS+S D YDVDLD
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
Query: 121 TELDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSN 180
TELDFLRNKLSEV RKEN+VL+QELQALERQTASSN
Sbjct: 121 TELDFLRNKLSEV-------------------------RKENVVLNQELQALERQTASSN 180
Query: 181 SQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGD 240
SQ+N FNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGD
Sbjct: 181 SQVNRFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGD 240
Query: 241 ISHHHNGFSNAKLDDIQEFLADLKTL 265
ISHHH GFSNAKLDDIQEFLADLK L
Sbjct: 241 ISHHHKGFSNAKLDDIQEFLADLKAL 241
BLAST of CaUC06G121850 vs. ExPASy Swiss-Prot
Match:
Q2V0Z5 (Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 2.1e-50
Identity = 120/272 (44.12%), Postives = 173/272 (63.60%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSD--RSQDL 60
MEGSK EAVFDS+NLNPQ+FINEA+N V+D +D AFDFY AS +LK +GSD +SQ L
Sbjct: 1 MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60
Query: 61 TLGISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHD--YDVD 120
+ GI+RVR L+ +D RL +WE Y L CF+VP+GF LP ++ES +S+ D YD++
Sbjct: 61 SNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVLPKSEES---SSVHQDGLYDLE 120
Query: 121 LDTELDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTAS 180
LD ELD LR+KL+ V K ++ L ELQALER + S
Sbjct: 121 LDAELDSLRDKLNVV-------------------------GKRSVELDSELQALERSSVS 180
Query: 181 SNSQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTN 240
+ NEAL+LY+++S++E+F+EM ASELRA + +LK RRM+ ++ +KV++
Sbjct: 181 RERSLRLVNEALELYDESSMDEIFKEMTKMASELRASVERLKTRRMKASESAKVKR---- 238
Query: 241 GDISHHHNGFS----NAKLDDIQEFLADLKTL 265
+ +H FS + KL+D+++F A+L+ +
Sbjct: 241 --LKNHGKEFSAMTFDGKLEDLEKFQAELRKM 238
BLAST of CaUC06G121850 vs. ExPASy TrEMBL
Match:
A0A5A7US57 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00040 PE=3 SV=1)
HSP 1 Score: 417.5 bits (1072), Expect = 4.0e-113
Identity = 219/264 (82.95%), Postives = 233/264 (88.26%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASAALKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHDYDVDLDTE 120
GIS+VRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSI+HD DVDLDTE
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDTE 120
Query: 121 LDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSNSQ 180
LD LRNKLSEV RKENIVL+QELQALERQTASSNSQ
Sbjct: 121 LDLLRNKLSEV-------------------------RKENIVLNQELQALERQTASSNSQ 180
Query: 181 INHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDIS 240
I+HFNEALQLYEQ+SVN+MFQEM+ TASELRAKIGK+KKRR EEAKL+KVEKVHTNGDIS
Sbjct: 181 ISHFNEALQLYEQSSVNDMFQEMIKTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDIS 239
Query: 241 HHHNGFSNAKLDDIQEFLADLKTL 265
HHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 241 HHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CaUC06G121850 vs. ExPASy TrEMBL
Match:
A0A5A7UQ95 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003370 PE=3 SV=1)
HSP 1 Score: 414.8 bits (1065), Expect = 2.6e-112
Identity = 217/264 (82.20%), Postives = 232/264 (87.88%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASA LKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASATLKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHDYDVDLDTE 120
GIS+VRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSI+HD DVDLDTE
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDTE 120
Query: 121 LDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSNSQ 180
LD LRNKLSEV RKENIVL+QELQALERQTASSNSQ
Sbjct: 121 LDLLRNKLSEV-------------------------RKENIVLNQELQALERQTASSNSQ 180
Query: 181 INHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDIS 240
I+HFNEALQLYEQ+SVN+MFQEM+ TASELR+KIGK+KKRR EEAKL+KVEKVHTNGDIS
Sbjct: 181 ISHFNEALQLYEQSSVNDMFQEMIKTASELRSKIGKMKKRRTEEAKLAKVEKVHTNGDIS 239
Query: 241 HHHNGFSNAKLDDIQEFLADLKTL 265
HHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 241 HHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CaUC06G121850 vs. ExPASy TrEMBL
Match:
A0A6J1JME3 (protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)
HSP 1 Score: 409.1 bits (1050), Expect = 1.4e-110
Identity = 218/266 (81.95%), Postives = 227/266 (85.34%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHD--YDVDLD 120
GISRVR VQ GLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP VTS+S D YDVDLD
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
Query: 121 TELDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSN 180
TELDFLR LSEV RKENIVL+QELQALERQTASSN
Sbjct: 121 TELDFLRKNLSEV-------------------------RKENIVLNQELQALERQTASSN 180
Query: 181 SQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGD 240
SQ+N FNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTN D
Sbjct: 181 SQVNRFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRD 240
Query: 241 ISHHHNGFSNAKLDDIQEFLADLKTL 265
ISHHH GFSNAKLDDIQEFLADLKTL
Sbjct: 241 ISHHHKGFSNAKLDDIQEFLADLKTL 241
BLAST of CaUC06G121850 vs. ExPASy TrEMBL
Match:
A0A6J1E0A1 (protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1)
HSP 1 Score: 409.1 bits (1050), Expect = 1.4e-110
Identity = 217/266 (81.58%), Postives = 227/266 (85.34%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHD--YDVDLD 120
GISRVR VQ GLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP VTS+S D YDVDLD
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
Query: 121 TELDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSN 180
TELDFLRNKLSEV RKENIVL+QELQALERQ ASSN
Sbjct: 121 TELDFLRNKLSEV-------------------------RKENIVLNQELQALERQAASSN 180
Query: 181 SQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGD 240
SQ+N FNEALQLYE+NSVNEMFQEMMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGD
Sbjct: 181 SQVNRFNEALQLYERNSVNEMFQEMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGD 240
Query: 241 ISHHHNGFSNAKLDDIQEFLADLKTL 265
SHHH GFSNAKLDDIQEFLADLK L
Sbjct: 241 ASHHHKGFSNAKLDDIQEFLADLKAL 241
BLAST of CaUC06G121850 vs. ExPASy TrEMBL
Match:
A0A6J1JD43 (protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)
HSP 1 Score: 404.4 bits (1038), Expect = 3.5e-109
Identity = 218/267 (81.65%), Postives = 227/267 (85.02%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHD--YDVDLD 120
GISRVR VQ GLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP VTS+S D YDVDLD
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120
Query: 121 TELDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTASSN 180
TELDFLR LSEV RKENIVL+QELQALERQTASSN
Sbjct: 121 TELDFLRKNLSEV-------------------------RKENIVLNQELQALERQTASSN 180
Query: 181 SQINHFNEALQLYEQNSVNEMFQ-EMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNG 240
SQ+N FNEALQLYEQNSVNEMFQ EMMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTN
Sbjct: 181 SQVNRFNEALQLYEQNSVNEMFQAEMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNR 240
Query: 241 DISHHHNGFSNAKLDDIQEFLADLKTL 265
DISHHH GFSNAKLDDIQEFLADLKTL
Sbjct: 241 DISHHHKGFSNAKLDDIQEFLADLKTL 242
BLAST of CaUC06G121850 vs. TAIR 10
Match:
AT5G35520.1 (minichromosome instability 12 (mis12)-like )
HSP 1 Score: 200.7 bits (509), Expect = 1.5e-51
Identity = 120/272 (44.12%), Postives = 173/272 (63.60%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSD--RSQDL 60
MEGSK EAVFDS+NLNPQ+FINEA+N V+D +D AFDFY AS +LK +GSD +SQ L
Sbjct: 1 MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60
Query: 61 TLGISRVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSISHD--YDVD 120
+ GI+RVR L+ +D RL +WE Y L CF+VP+GF LP ++ES +S+ D YD++
Sbjct: 61 SNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVLPKSEES---SSVHQDGLYDLE 120
Query: 121 LDTELDFLRNKLSEVLSVSYVNYFLCLCISYFMRKCIFQARKENIVLSQELQALERQTAS 180
LD ELD LR+KL+ V K ++ L ELQALER + S
Sbjct: 121 LDAELDSLRDKLNVV-------------------------GKRSVELDSELQALERSSVS 180
Query: 181 SNSQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTN 240
+ NEAL+LY+++S++E+F+EM ASELRA + +LK RRM+ ++ +KV++
Sbjct: 181 RERSLRLVNEALELYDESSMDEIFKEMTKMASELRASVERLKTRRMKASESAKVKR---- 238
Query: 241 GDISHHHNGFS----NAKLDDIQEFLADLKTL 265
+ +H FS + KL+D+++F A+L+ +
Sbjct: 241 --LKNHGKEFSAMTFDGKLEDLEKFQAELRKM 238
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038879945.1 | 3.1e-115 | 85.23 | protein MIS12 homolog [Benincasa hispida] | [more] |
KAA0058004.1 | 8.3e-113 | 82.95 | Centromere protein Mis12 [Cucumis melo var. makuwa] >TYK28378.1 Centromere prote... | [more] |
XP_023515499.1 | 1.4e-112 | 82.71 | protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
KAA0058032.1 | 5.4e-112 | 82.20 | Centromere protein Mis12 [Cucumis melo var. makuwa] | [more] |
KAG6589575.1 | 9.2e-112 | 82.33 | Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q2V0Z5 | 2.1e-50 | 44.12 | Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7US57 | 4.0e-113 | 82.95 | Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A5A7UQ95 | 2.6e-112 | 82.20 | Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A6J1JME3 | 1.4e-110 | 81.95 | protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=... | [more] |
A0A6J1E0A1 | 1.4e-110 | 81.58 | protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1 | [more] |
A0A6J1JD43 | 3.5e-109 | 81.65 | protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G35520.1 | 1.5e-51 | 44.12 | minichromosome instability 12 (mis12)-like | [more] |