CaUC06G121550 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCCTACGTTGACACCAGGAAGCGGCCACGGGAAGATTCCGACGTTTCTCTCTTCAATTTCATCGGATCCAACTCCAAGTTCCTCCGACTTGAAAATTCCACCGACTTGAACTTCGATGCGCCGATTTCAAAAGCGATCGATTCTTCCGGCCTCGAGTCGTTTCAAGCGCACGAAATTCAGGAAGACCTACTGAATATTCTCGACGATACCGACGCTTCCATAGATCGCGAGTCGGCGATTCAAGATCTCGACTCGGTGATCAGAAGCTTCGAGAAGGAAATTGAAGTGCCAGTGCCTGTTGTTCAGTCTGAACTTGGATTTCTTCTAGAAGCGTCAGACAATGAATTAGGGCTTCCGCCTACCGGCGAAAAAGGGGAAATCGAAGGCGTTAATCATGCGGCGCCGTTTTCAGGTAGCGGCGGTGTGAAAGGGATTTTTGGGTTTGAGGATGAAATGGTCTCGAATTACTATTGGTTTGAAAATTTGAGGAGCGAGATTAAGGAATGGAGTCCGGAAGAGGAAGAGGAGGCGGTGGCGTTGGGTGGATTGTTTGATCATACGGACGTGGCGGCGGAGTTGCCGACGCCGTATCGATCGGAGACGATGCCCTGTTTATAA ATGGAACCCTACGTTGACACCAGGAAGCGGCCACGGGAAGATTCCGACGTTTCTCTCTTCAATTTCATCGGATCCAACTCCAAGTTCCTCCGACTTGAAAATTCCACCGACTTGAACTTCGATGCGCCGATTTCAAAAGCGATCGATTCTTCCGGCCTCGAGTCGTTTCAAGCGCACGAAATTCAGGAAGACCTACTGAATATTCTCGACGATACCGACGCTTCCATAGATCGCGAGTCGGCGATTCAAGATCTCGACTCGGTGATCAGAAGCTTCGAGAAGGAAATTGAAGTGCCAGTGCCTGTTGTTCAGTCTGAACTTGGATTTCTTCTAGAAGCGTCAGACAATGAATTAGGGCTTCCGCCTACCGGCGAAAAAGGGGAAATCGAAGGCGTTAATCATGCGGCGCCGTTTTCAGGTAGCGGCGGTGTGAAAGGGATTTTTGGGTTTGAGGATGAAATGGTCTCGAATTACTATTGGTTTGAAAATTTGAGGAGCGAGATTAAGGAATGGAGTCCGGAAGAGGAAGAGGAGGCGGTGGCGTTGGGTGGATTGTTTGATCATACGGACGTGGCGGCGGAGTTGCCGACGCCGTATCGATCGGAGACGATGCCCTGTTTATAA ATGGAACCCTACGTTGACACCAGGAAGCGGCCACGGGAAGATTCCGACGTTTCTCTCTTCAATTTCATCGGATCCAACTCCAAGTTCCTCCGACTTGAAAATTCCACCGACTTGAACTTCGATGCGCCGATTTCAAAAGCGATCGATTCTTCCGGCCTCGAGTCGTTTCAAGCGCACGAAATTCAGGAAGACCTACTGAATATTCTCGACGATACCGACGCTTCCATAGATCGCGAGTCGGCGATTCAAGATCTCGACTCGGTGATCAGAAGCTTCGAGAAGGAAATTGAAGTGCCAGTGCCTGTTGTTCAGTCTGAACTTGGATTTCTTCTAGAAGCGTCAGACAATGAATTAGGGCTTCCGCCTACCGGCGAAAAAGGGGAAATCGAAGGCGTTAATCATGCGGCGCCGTTTTCAGGTAGCGGCGGTGTGAAAGGGATTTTTGGGTTTGAGGATGAAATGGTCTCGAATTACTATTGGTTTGAAAATTTGAGGAGCGAGATTAAGGAATGGAGTCCGGAAGAGGAAGAGGAGGCGGTGGCGTTGGGTGGATTGTTTGATCATACGGACGTGGCGGCGGAGTTGCCGACGCCGTATCGATCGGAGACGATGCCCTGTTTATAA MEPYVDTRKRPREDSDVSLFNFIGSNSKFLRLENSTDLNFDAPISKAIDSSGLESFQAHEIQEDLLNILDDTDASIDRESAIQDLDSVIRSFEKEIEVPVPVVQSELGFLLEASDNELGLPPTGEKGEIEGVNHAAPFSGSGGVKGIFGFEDEMVSNYYWFENLRSEIKEWSPEEEEEAVALGGLFDHTDVAAELPTPYRSETMPCL Homology
BLAST of CaUC06G121550 vs. NCBI nr
Match: XP_038890344.1 (uncharacterized protein LOC120079943 [Benincasa hispida]) HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88 Identity = 174/207 (84.06%), Postives = 185/207 (89.37%), Query Frame = 0
BLAST of CaUC06G121550 vs. NCBI nr
Match: TYK28413.1 (uncharacterized protein E5676_scaffold629G00410 [Cucumis melo var. makuwa]) HSP 1 Score: 308.1 bits (788), Expect = 5.6e-80 Identity = 166/209 (79.43%), Postives = 177/209 (84.69%), Query Frame = 0
BLAST of CaUC06G121550 vs. NCBI nr
Match: XP_008453684.1 (PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo]) HSP 1 Score: 305.8 bits (782), Expect = 2.8e-79 Identity = 165/209 (78.95%), Postives = 176/209 (84.21%), Query Frame = 0
BLAST of CaUC06G121550 vs. NCBI nr
Match: KAA0059746.1 (uncharacterized protein E6C27_scaffold34725G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 305.8 bits (782), Expect = 2.8e-79 Identity = 165/209 (78.95%), Postives = 176/209 (84.21%), Query Frame = 0
BLAST of CaUC06G121550 vs. NCBI nr
Match: KGN63814.1 (hypothetical protein Csa_013978 [Cucumis sativus]) HSP 1 Score: 286.6 bits (732), Expect = 1.7e-73 Identity = 159/212 (75.00%), Postives = 169/212 (79.72%), Query Frame = 0
BLAST of CaUC06G121550 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.7e-80 Identity = 166/209 (79.43%), Postives = 177/209 (84.69%), Query Frame = 0
BLAST of CaUC06G121550 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79 Identity = 165/209 (78.95%), Postives = 176/209 (84.21%), Query Frame = 0
BLAST of CaUC06G121550 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79 Identity = 165/209 (78.95%), Postives = 176/209 (84.21%), Query Frame = 0
BLAST of CaUC06G121550 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 8.4e-74 Identity = 159/212 (75.00%), Postives = 169/212 (79.72%), Query Frame = 0
BLAST of CaUC06G121550 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 1.3e-66 Identity = 145/208 (69.71%), Postives = 163/208 (78.37%), Query Frame = 0
BLAST of CaUC06G121550 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 3.1e-12 Identity = 61/182 (33.52%), Postives = 92/182 (50.55%), Query Frame = 0
BLAST of CaUC06G121550 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11 Identity = 50/133 (37.59%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of CaUC06G121550 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11 Identity = 50/133 (37.59%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of CaUC06G121550 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 3.3e-06 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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