CaUC06G121320 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G121320
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Protein of unknown function (DUF789)
Location	Ciama_Chr06: 26391243 .. 26392751 (+)
RNA-Seq Expression	CaUC06G121320
Synteny	CaUC06G121320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCACCTCCTTGGGCCAAGACATACAATAGAAAGGCGTTCTTTGCCAATGTTGTTTAACTCCTTTGCAGAACCCCTTAGTAAGATTAGAAATTGTAGGCAAAAGATTGTGAAATGCTTGCCAACATAAAATCTTAATCTTGTTAGGGATATTGCAATTCCAGAGAAACTTCCACCATTTCTTAGTTTGTTGATTACCTGAATCCTCAGCCTCTCCCACTTCATTACTAGCTAGATGGTAACCACTTCAAACCGAATAGCAACTATTCTTCTCATAATTCCATATAGTATTCTTAAAAGATTTGGATGCTTGATTTTTAACATATCATTCCCTTTCCACAGCAGGTAATATGGCATTCTTAGTTTTCTACTGGTTTGTGCCTGTAACTTTTAGGTAATCTTCAAGATATGTGTTCTCTAGGCTCCATTCACTCATTTTGTGAACTGAATAAACCCATTAACTTATGCCAAGGTTACCATAAGATGAATCAGAACAAGCAATCGTTGCCATAGTTCTTCTGACATCTCACTCTCATAAAAATGTTGTTTTTTCTTTTCTGTAACTTTTATCCTTCTGATTGATAAAGCTTGTTGTTATTAGCCAAGTATAAGTCAATCCCACATTAACTGATTGTTGAAAGAATGACCCTTTCTCTGTGACTGGCCATGTCAGAGGTAAGTTTAATTCTTTTCAGGTTTGAACTGACCAATAAATTCATTGGTATTTACATATATGGAGCTATATTGCGTTAAATCATGGATTGTGTAAGATGCATTATTCTCATGTGCATACAATATCTTCATATTTTGTCTAATAAACCAAATTTAGACTTGTGTTCATTCTTCATGGACACACTCGGTGAAAGTTTATTCAATAGTCCGGGTAACTTTTCAAACTTTTATAGGATCTGAATAACACATTAAATATTATTTCTTCACCAACTCCTTGTATATTTCATTTTGGAGCTTATTCATTGCTTCTGTGCTCATCTCTTACGCCTCATTTCTGCTCAAGAAAATTTTTGTTACATCAGTGTATTTCTAGTATGACTCAACATTCGTTGTTTTGACGTTTAGCTCATTTGTTTCAAAATGTAAAATATATTATCCATTTTTCTGCTTCATCCAGAGCTCTTACGTACTTGAGCCTGTCCTAGTCACTAGTCACCATTGTGTATAAAAATCCAATTTTCCTACTGTTGTTAATCATTTATTTGGCTTCTTCTCCACAAGTGTTGATCGTTCTCGTTGCTTCGCAGGTAATGGACATGGCCTGCCACCAGTAATGATATATCCAAAGGACATTGATGATATCGCAAAGGTCTCCTTGCCTGTTTTTGGATTGGCTTCTTATAAACTGAAGGGATCGATATGGGGGCAAAATGGCGTCAATGAGCATCAAACGGCAAATTCTCTCATGCAGGCAGCAGATAAATGGCTGAGGAGCCTTCAGGTCATTCAACCTGATTTTCAGTTCTTTGCATCACATGGGACATACCGGAGATGA

mRNA sequence

ATGCCTCACCTCCTTGGGCCAAGACATACAATAGAAAGGCGTTCTTTGCCAATGTTGTTTAACTCCTTTGCAGAACCCCTTAGTAATGGACATGGCCTGCCACCAGTAATGATATATCCAAAGGACATTGATGATATCGCAAAGGTCTCCTTGCCTGTTTTTGGATTGGCTTCTTATAAACTGAAGGGATCGATATGGGGGCAAAATGGCGTCAATGAGCATCAAACGGCAAATTCTCTCATGCAGGCAGCAGATAAATGGCTGAGGAGCCTTCAGGTCATTCAACCTGATTTTCAGTTCTTTGCATCACATGGGACATACCGGAGATGA

Coding sequence (CDS)

ATGCCTCACCTCCTTGGGCCAAGACATACAATAGAAAGGCGTTCTTTGCCAATGTTGTTTAACTCCTTTGCAGAACCCCTTAGTAATGGACATGGCCTGCCACCAGTAATGATATATCCAAAGGACATTGATGATATCGCAAAGGTCTCCTTGCCTGTTTTTGGATTGGCTTCTTATAAACTGAAGGGATCGATATGGGGGCAAAATGGCGTCAATGAGCATCAAACGGCAAATTCTCTCATGCAGGCAGCAGATAAATGGCTGAGGAGCCTTCAGGTCATTCAACCTGATTTTCAGTTCTTTGCATCACATGGGACATACCGGAGATGA

Protein sequence

MPHLLGPRHTIERRSLPMLFNSFAEPLSNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQTANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR

Homology

[Close]

BLAST of CaUC06G121320 vs. NCBI nr
Match: XP_038897708.1 (uncharacterized protein LOC120085653 [Benincasa hispida])

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 29  NGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQTANSLMQAADKWL 88
           NGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNG+NEHQTANSLMQAADKWL
Sbjct: 315 NGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGINEHQTANSLMQAADKWL 374

Query: 89  RSLQVIQPDFQFFASHGTYRR 110
           RSLQVIQPDFQFFASHGTY R
Sbjct: 375 RSLQVIQPDFQFFASHGTYWR 395

[Close]

BLAST of CaUC06G121320 vs. NCBI nr
Match: XP_008453426.1 (PREDICTED: uncharacterized protein LOC103494138 isoform X1 [Cucumis melo] >KAA0058094.1 uncharacterized protein E6C27_scaffold274G004020 [Cucumis melo var. makuwa] >TYK28447.1 uncharacterized protein E5676_scaffold629G00790 [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 2.4e-34
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 18  MLFNSFAEP-LSNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P   N H LPPVM+YPKDIDDI K+SLPVFG+ASYKLKGSIWGQNG+N+HQ 
Sbjct: 305 LTYHSLSTPKKGNRHSLPPVMVYPKDIDDITKISLPVFGMASYKLKGSIWGQNGINDHQK 364

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAADKWLRSLQV QPDFQFF+SHGTY R
Sbjct: 365 ANSLMQAADKWLRSLQVSQPDFQFFSSHGTYWR 397

[Close]

BLAST of CaUC06G121320 vs. NCBI nr
Match: XP_031736215.1 (uncharacterized protein LOC101215266 [Cucumis sativus] >KGN63839.1 hypothetical protein Csa_014275 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-33
Identity = 68/93 (73.12%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 18  MLFNSFAEP-LSNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P   N H LPP+M+YPKDIDDI K+SLPVFG+ASYK+KGSIWGQNG+++HQ 
Sbjct: 305 LTYHSLSTPKKGNRHSLPPIMVYPKDIDDITKISLPVFGMASYKVKGSIWGQNGISDHQK 364

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAADKWLRSLQV QPDFQFF+SHGTY R
Sbjct: 365 ANSLMQAADKWLRSLQVSQPDFQFFSSHGTYWR 397

[Close]

BLAST of CaUC06G121320 vs. NCBI nr
Match: XP_022134722.1 (uncharacterized protein LOC111006925 [Momordica charantia])

HSP 1 Score: 145.6 bits (366), Expect = 2.5e-31
Identity = 69/93 (74.19%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 18  MLFNSFAEPL-SNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P+  NGHG  PVMIYP D+D + KVSLPVFGLASYKLKGSIW QNGV EHQ 
Sbjct: 308 LTYHSLSTPIRGNGHGQAPVMIYPNDMDGVPKVSLPVFGLASYKLKGSIWAQNGVKEHQM 367

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAAD WLR LQV QPDFQFFASHGTY R
Sbjct: 368 ANSLMQAADNWLRLLQVHQPDFQFFASHGTYWR 400

[Close]

BLAST of CaUC06G121320 vs. NCBI nr
Match: XP_022921943.1 (uncharacterized protein LOC111430050 [Cucurbita moschata] >KAG7023306.1 hypothetical protein SDJN02_14331 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28
Identity = 67/93 (72.04%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 18  MLFNSFAEPL-SNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P+  NGHG  P MIYP D D I KVSLPVFGLASYKLKGSIW QN V EHQ 
Sbjct: 305 LTYHSLSTPIRGNGHGQAPAMIYPNDNDGIPKVSLPVFGLASYKLKGSIWAQNCVKEHQM 364

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAA+KWLR LQV QPDFQFFASH TY R
Sbjct: 365 ANSLMQAAEKWLRRLQVNQPDFQFFASHMTYWR 397

[Close]

BLAST of CaUC06G121320 vs. ExPASy TrEMBL
Match: A0A5A7USF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00790 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 18  MLFNSFAEP-LSNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P   N H LPPVM+YPKDIDDI K+SLPVFG+ASYKLKGSIWGQNG+N+HQ 
Sbjct: 305 LTYHSLSTPKKGNRHSLPPVMVYPKDIDDITKISLPVFGMASYKLKGSIWGQNGINDHQK 364

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAADKWLRSLQV QPDFQFF+SHGTY R
Sbjct: 365 ANSLMQAADKWLRSLQVSQPDFQFFSSHGTYWR 397

[Close]

BLAST of CaUC06G121320 vs. ExPASy TrEMBL
Match: A0A1S3BX10 (uncharacterized protein LOC103494138 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494138 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 18  MLFNSFAEP-LSNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P   N H LPPVM+YPKDIDDI K+SLPVFG+ASYKLKGSIWGQNG+N+HQ 
Sbjct: 305 LTYHSLSTPKKGNRHSLPPVMVYPKDIDDITKISLPVFGMASYKLKGSIWGQNGINDHQK 364

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAADKWLRSLQV QPDFQFF+SHGTY R
Sbjct: 365 ANSLMQAADKWLRSLQVSQPDFQFFSSHGTYWR 397

[Close]

BLAST of CaUC06G121320 vs. ExPASy TrEMBL
Match: A0A0A0LS49 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024240 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.3e-33
Identity = 68/93 (73.12%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 18  MLFNSFAEP-LSNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P   N H LPP+M+YPKDIDDI K+SLPVFG+ASYK+KGSIWGQNG+++HQ 
Sbjct: 305 LTYHSLSTPKKGNRHSLPPIMVYPKDIDDITKISLPVFGMASYKVKGSIWGQNGISDHQK 364

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAADKWLRSLQV QPDFQFF+SHGTY R
Sbjct: 365 ANSLMQAADKWLRSLQVSQPDFQFFSSHGTYWR 397

[Close]

BLAST of CaUC06G121320 vs. ExPASy TrEMBL
Match: A0A6J1C0E1 (uncharacterized protein LOC111006925 OS=Momordica charantia OX=3673 GN=LOC111006925 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 69/93 (74.19%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 18  MLFNSFAEPL-SNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P+  NGHG  PVMIYP D+D + KVSLPVFGLASYKLKGSIW QNGV EHQ 
Sbjct: 308 LTYHSLSTPIRGNGHGQAPVMIYPNDMDGVPKVSLPVFGLASYKLKGSIWAQNGVKEHQM 367

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAAD WLR LQV QPDFQFFASHGTY R
Sbjct: 368 ANSLMQAADNWLRLLQVHQPDFQFFASHGTYWR 400

[Close]

BLAST of CaUC06G121320 vs. ExPASy TrEMBL
Match: A0A6J1E577 (uncharacterized protein LOC111430050 OS=Cucurbita moschata OX=3662 GN=LOC111430050 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.7e-29
Identity = 67/93 (72.04%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 18  MLFNSFAEPL-SNGHGLPPVMIYPKDIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQT 77
           + ++S + P+  NGHG  P MIYP D D I KVSLPVFGLASYKLKGSIW QN V EHQ 
Sbjct: 305 LTYHSLSTPIRGNGHGQAPAMIYPNDNDGIPKVSLPVFGLASYKLKGSIWAQNCVKEHQM 364

Query: 78  ANSLMQAADKWLRSLQVIQPDFQFFASHGTYRR 110
           ANSLMQAA+KWLR LQV QPDFQFFASH TY R
Sbjct: 365 ANSLMQAAEKWLRRLQVNQPDFQFFASHMTYWR 397

[Close]

BLAST of CaUC06G121320 vs. TAIR 10
Match: AT5G49220.1 (Protein of unknown function (DUF789) )

HSP 1 Score: 80.5 bits (197), Expect = 9.3e-16
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 42  DIDDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQTANSLMQAADKWLRSLQVIQPDFQFF 101
           D     K+ LP FGLASYKLK S+W QN + E Q   SL+QAADKWL+ LQV  PD++FF
Sbjct: 342 DSQPSTKLPLPTFGLASYKLKVSVWNQNRIQESQKMTSLLQAADKWLKRLQVDHPDYRFF 401

Query: 102 ASHGTYRR 110
            S+    R
Sbjct: 402 TSNSPQMR 409

[Close]

BLAST of CaUC06G121320 vs. TAIR 10
Match: AT2G01260.1 (Protein of unknown function (DUF789) )

HSP 1 Score: 78.2 bits (191), Expect = 4.6e-15
Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 48  KVSLPVFGLASYKLKGSIWGQNGVNEHQTANSLMQAADKWLRSLQVIQPDFQFF 102
           K+SLPVFGLASYK +GS+W   G +EHQ  NSL QAADKWL S  V  PDF FF
Sbjct: 313 KMSLPVFGLASYKFRGSLWTPIGGSEHQLVNSLFQAADKWLHSCHVSHPDFLFF 366

[Close]

BLAST of CaUC06G121320 vs. TAIR 10
Match: AT1G15030.1 (Protein of unknown function (DUF789) )

HSP 1 Score: 77.8 bits (190), Expect = 6.0e-15
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 44  DDIAKVSLPVFGLASYKLKGSIWGQNGVNEHQTANSLMQAADKWLRSLQVIQPDFQFF 102
           + + K+ LPVFGLASYKL+GS+W   G + HQ ANSL QAAD WLR  QV  PDF FF
Sbjct: 300 ESVEKMELPVFGLASYKLRGSVWTSFGGSGHQLANSLFQAADNWLRLRQVNHPDFIFF 357

[Close]

BLAST of CaUC06G121320 vs. TAIR 10
Match: AT4G16100.1 (Protein of unknown function (DUF789) )

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-11
Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 47  AKVSLPVFGLASYKLKGSIWG-QNGVNEHQTANSLMQAADKWLRSLQVIQPDFQFFASH 105
           AK+ LP FGLASYK K S W  ++ V+E+Q   +L++ A++WLR L+VI PDF+ F SH
Sbjct: 330 AKLPLPTFGLASYKFKLSEWSPESDVDENQRVGTLLRTAEEWLRRLKVILPDFRHFISH 388

[Close]

BLAST of CaUC06G121320 vs. TAIR 10
Match: AT1G73210.1 (Protein of unknown function (DUF789) )

HSP 1 Score: 50.8 bits (120), Expect = 7.9e-07
Identity = 21/54 (38.89%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 48  KVSLPVFGLASYKLKGSIWGQNGVNEHQTANSLMQAADKWLRSLQVIQPDFQFF 102
           ++ LP FG+ +YK++G +WG+ G ++ +    L  AAD WL+ L V   D+ FF
Sbjct: 257 RMPLPPFGVTTYKMQGDLWGKTGFDQDRLL-YLQSAADSWLKQLNVDHHDYNFF 309

The following BLAST results are available for this feature:

BLAST of CaUC06G121320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897708.1	1.2e-38	97.53	uncharacterized protein LOC120085653 [Benincasa hispida]	[more]
XP_008453426.1	2.4e-34	76.34	PREDICTED: uncharacterized protein LOC103494138 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_031736215.1	2.7e-33	73.12	uncharacterized protein LOC101215266 [Cucumis sativus] >KGN63839.1 hypothetical ...	[more]
XP_022134722.1	2.5e-31	74.19	uncharacterized protein LOC111006925 [Momordica charantia]	[more]
XP_022921943.1	1.2e-28	72.04	uncharacterized protein LOC111430050 [Cucurbita moschata] >KAG7023306.1 hypothet...	[more]

BLAST of CaUC06G121320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G121320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7USF1	1.2e-34	76.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BX10	1.2e-34	76.34	uncharacterized protein LOC103494138 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LS49	1.3e-33	73.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024240 PE=4 SV=1	[more]
A0A6J1C0E1	1.2e-31	74.19	uncharacterized protein LOC111006925 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1E577	5.7e-29	72.04	uncharacterized protein LOC111430050 OS=Cucurbita moschata OX=3662 GN=LOC1114300...	[more]

BLAST of CaUC06G121320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49220.1	9.3e-16	54.41	Protein of unknown function (DUF789)	[more]
AT2G01260.1	4.6e-15	66.67	Protein of unknown function (DUF789)	[more]
AT1G15030.1	6.0e-15	62.07	Protein of unknown function (DUF789)	[more]
AT4G16100.1	2.4e-11	52.54	Protein of unknown function (DUF789)	[more]
AT1G73210.1	7.9e-07	38.89	Protein of unknown function (DUF789)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008507	Protein of unknown function DUF789	PFAM	PF05623	DUF789	coord: 44..101 e-value: 5.5E-18 score: 65.6
None	No IPR available	PANTHER	PTHR31343	T15D22.8	coord: 21..109
None	No IPR available	PANTHER	PTHR31343:SF5	DUF789 FAMILY PROTEIN	coord: 21..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G121320.1	CaUC06G121320.1	mRNA