CaUC06G120260 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G120260
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Fiber protein Fb15
Location	Ciama_Chr06: 25344751 .. 25351795 (+)
RNA-Seq Expression	CaUC06G120260
Synteny	CaUC06G120260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGAAGCAATTCTTCTCCGAAGTCAAGGGCTTGAAGGTTAAGGAGCTGCCCGCCTATGTGAAGCCCATGCTCTCCATTGATTATGCCAAGAAGGCAGTGCAGAGAAGTCTCGACAATTACAACGCCAAGTACATTCAAACTGGTTCTATTGACCCTCTCTATCATGTCTGCTTTGGTGGTATGATCTTTTCGTACCTCGTTGCGCTTCCTGAGGAACGGCGCCACCTTGAACATCAGCAACACGCCAAAGAACATGGTGGCCACTGATTGAGTTCTTTATATTTTGAGGTACGGCTTCCAATGGGTTTTCTTAAATTGATTGATTATGGTTCAATTCATGCATCTATTGAAATGGGTATTTCTGATCTGAAACTTCGAATTTTCTCTGATTGGTGAAATTTGTTTCCCTTTTTCATCGTCAACTAACTTTGATTGCCCATATAGTCTTTGTTTCCATAGATTTGGACCTGGAAACCAAGACAATTGTTATTATTGTGTTGTATTTTGTCGACGCTGGTGCTCAGATAATATTTTTACTATTGTTAATACGTAATGAATATTGTTTTCTGTGGAGTTTGTTAATTGTATAAGAGCATTCAGCATATGATACATCTATGGAAGTTTTTTTGGCGTGAAATCTTCCGAGCGTCTATTTTGCTCACGCCATTTTGATTTGGAGAAAAAGGGGCCTTATGATTTGGAAAATGAGGAACTGGAGTCGAAGAATGTGTTATTCTACCCTGTCTCGAAGAAACTATTTGGATTAGAAAAAGGACCTATGACCTTTTATTAGTTTTTTGATTCTCTTGTTTATTTATTTATTTTAGATTTTTTTTTCCTAAAAGATTCCACACTTTTCATTAAGAGAATGAAAAGAGGTTAATTAATTATTGTTTATATTGCAACTTACCAGACCCATTTTCAGTAGATCGTTGCATTATTTCTATTAATGTTTTATGTTCTCATAGAACCTTTTTTAGGTGCATTCGTAGTGACCATCTTTAGTTCCTTAATAAGGAAATTCTTCTTATTCTGGCATAGGCCGGGGTCTTGAGATTTTTGTGTTTGGCTGACCGTAGATATGACTTCTCAAGTGTAAAGCATCCAGATCTACAGCCCATAACATGACCTTTGGCTTTTACTGACTTCATAGGCTTGCAGGCCTGACCTTTTACTTCTTGAATGTTGGTGCCACCAAGACTAGCTTTCCATAATTAAACAGTCGTGCATTTTCACCATTTTCATTCTTTATTACTTATTCGTTAAAATAATCCATGCATGTTTGGTGTTTGAAAGATGATAGAAAGAGGAGATAATACGTGTAACCAAATGACTGCTTTTTTATGGGACATAGAAACACCAGTGACATCTTTTCTGTATCCAAGTTCAATGGTCGGTGTTTGTGGTGCAGGTGAGTATCATTCATTGCGAGGTCTAGCCTTGCAATTGAGTTTGTCTGCATCCACTTTTTCCCCACAAGTAGGACATCTCATTGCTCTTATGATTTCTTATAGTTGTTGCCTGTTGAAAGAAACGTGTCTGATATGCATAATTACTGTATTATGGCCTTAAAAGTCTTTTTTTTTTTCCTTTTCTTTTGCTGCTTTTTGTTCCTTTCAATATGTTGAGATCAGTTGTCTTTTGTGCTTTGGCTTCTTACAAGGCCTAGCAGGCGAAAGTAGAGTGATCGAAAAAGTAGGATAACAAGTATGTAAATGAAGGATATTTAAGGGAACAAAGTACCCATGTTAGGAGTCCTAGAATTGCTTACCTTTGCCAGAATTTAAGGCTCCTTTCATTGCATTCTGTGCAAATGACTGCAGATTGATGAATACTCTAATGGAATACGAGTCTGGAATTGTATTGAGCAATCCTCGTCCAGGGTAATTTGTTTTGTAGTTGGTCTAGTTGACTTGTGTTGTGGGTTGGGCTGAGCGAGTCACGCCTGGGGTGGGTTGTCTAAAATTGAATCTTGATGCCTCTTCTCATCCGAGCAAGATGGGGGTTGGTTTGGGGGCTGTAATCAGAGATGAATTTGGGGTGTTGGTGGCAGGCCACGTTGTCTTTTGTTCAGTGAGTTTGGAGGCGGAGGCAGGGGAAGCTCCTGTGTTGTTGGAGGGTTTAAAATTGGCTGAAGCTTGTGGGAGTTATCAGGTGTGGATTGAAATTGATGCTGAAGTTGTTAAGAAAATACATGCTTTGAGTTTTGCCCTCTCCTTGGGGGTCATTTATGCAAAGATCTACAACCTGATGATTACACTAAGAAGCACTGGTTTAAGTTTTGCCCCTGCGTGATAAGGTGGCTCATAATCTGGCTGCCCATGTCGTTCATTTATCTTCTTCTGATGTTTGGACCCATTTGTTTCCTAATTGGCTCACCTAGATTGTTGGGGTTGAGAAGGAAGAAGTGGGGCTATAATTGTTTGTCTTCGTGAATGAAGTTATTTTTTGTCAAAAAGAAAAAAAAAATAGTTGACTTGTGTTGTGACAAGGACAACCTTCATGGACCAGAAAAACACAAGATATATGCTTTTCCTTTTTTCATTTTTGAAAGGAAACATCGATGGAATGAAAGAAACTAATGCTAAAAAATACAAGAAACCCAAAAGGGATACAAAATCATGATAGAAAATGAATTTAAACAATAAAACCTAATAGAATCTGAGAGCAATATAAAATAGATTTGAGAGCAATATAAAAGCATATTCCAATTGAGACAAATATCTTGAATAGTATGATGCAAATCTTTTAAAAAGAGAACACCATGAAGAGGCCTTCAAATGGAAAGAGCCAAACCAATCATCCTAAAAAAGATGTCTGTTATGAAAAACTCTCTGATTCTGTTCAAATCACAACTCATATCATAATGCCTTCCTTGTATTAGATCATAAGATTTTTGACTTTGAAGCTACGGCTGGGTAGATGATATATATGCTTTTTCTTAGCATAATTGTTCGTGCAGATTTTTAAATCTTGCTTATACAGTTATTCATGTGATTGTATGGTAAACTCATGTCTCTTTCGATGCGTGAGATTTAGATTTAGTCTCACTTATATTCCTAAACTTAACTCGTTTTCTAATATGTTTTTGTTATTTTTGCAGGGTGAAGGTGCCTCAAAGGTGTTTCTGGTCAATAATTTGTTTCCCGAATGTTTTTGTATCTTAGTCTTACTGGCTGAAACTTGCAATTATTTTCTTTTACACTTGGTGCCAGAGGAAATAAGCAGACATTTCTGTGATTTTTAACGATATATGGCAACCATCTTTGAGTCGCAGCATGTGTTCATGGCTGTTTGCTTTACTTTCTTTGCACATGATCCTTCCCCCATGTTTGTTTCTCTAGTTAGTTCTTTGTCAATGGCCTAAAATACTATTGCTGCAGACTTCAAATGCAAATTGATTGTCTTTCATTTCCTCAAGTTGTTAAAAGTAATCGAATACCCTTTCTGATTCTATCTGAGTATGATCAATTCAAATACCTCACTAATTTTCCTTATGTTCATAGACATTTTGAGATAATCTGCGTGAATCATTGAAACTTGGAAATTACTTTAGTTAGATAAATAAGAGTTAGCTGATGGGAATACTGGAAGCCAAAGAAAATGTACTTCAGGGAGTTATAGACAATTGTTTTGCTGAAAAAGAAAACATGTGCTTTTGTCTTTCCACACAAGGGATTTTAAGTTTTCTTGTGATAGATTGTCTATTATTTGATTTATGGGTGATCTTAAAATGTTTGTACAATTAATTTGCATTCTTAATGGATTCGGTTGGGTGCCATTGATTCATTGGGGAAGGAGAAAGTAGGGAAAATAATGGATTTTCAAGTCATTTTCAAGTTAGTGGTTCGTTTAAAATTTCCCACACTTCCACTCGTTGAACTTGAGAAGAAAAAAAGAATCAATTGCTTTATGAAGTTTGAACTAAATGTTAGTTATATTTATGGTAATAAATTTTTATAGATATATCGATATTTTAATATATAATATATAGTTCTACATTTTTATAGAGTTGACAGTGAGGTGGGAGGTGAATCCGTATTTTCATTATATCGTATAAAAATTCATGATACATAAACATAAGCAATAAAATGTCACCACAAAAGAGGACATCTACATTTTTTTAAGCAAACAAAACATACCAACAACAAAAACAAACTCATCTAATACTTCTAAATAAGGGGGAAATAACACAATTTGGAAAATACTAGCATGAACAGATATGTTCTCCTCTAGAGAAATGTAACAAAAATGAACAATATTAACAATGTTTCCAATAAAAACAATATCTTGAATGAGGACTAGTCTAATCTTTGTTAGAGAATTGTCCTCCCTATTTAGGCGCTTAATGACCATTCTTGCTCAATCACACATAAACATTCCAATAGCGCTTATGCTTTAAAAAAAAAACTTGACACATGTTAAACCTCAATTGTATTGGACTCTAAGTATGGTAAAATTGATGAGTTAACTCATTCTCTCTTATGAATTTTCCCTTGAGTTGTGTGTGATAACACACATATATATCCAAATACAATATAGGGGTGAAAGGTTCAAACTACAAATTTCTTGGTCATTAACACATATTGAATGTTAGTTGAGGTGTGCATGCTTTCACAAGCTTATATATTTTATATTTTAAAATGGTCTGATTTGATCAAATCTATTCATTTTATGGAGGCAAAATTCAATATGATAGATTCATAATATTAACAAGCCAACAACAACAATATCAATACAATGCCAAAAGGTCTTGTCTTAGAAATAGAACGTCAAAAGGGCGCAAACAAAGCTTGTAAGTTGTACTCAAAATTTATCTCAACTTGATTTTATTTTATCTTAAATAATAATTATCATTATAAGTTATAAATTTAAATCCAAGTTCAACAAAGAATGAGAACAATTTCTCTTTCAAGATTACTTCAAGTTGATTCCCACATGTAGTCTCCCTTTGCGTTTGAGTAATCGTTTTATTTAGTATTTCACAATCATTTTTTTTCCACAAATATCTGAATCAATCAATCATTCTCAAAAGTTATTGGAACATCAAATCCATTTTAGTTCGATTCCTTTCATCACAGAGTATGAGCATTTGATGATCCACAGAGGAATGGGCTTCAGTTTGATTCTCTAGAAATCCAGAGCATTGCCATCGCTTGTGGAGTCGATTCCGGACAGAGTTTCCAAGTTCGGAGATCGAAGAAGCTGAGGCTGAGACACAGAGCGGTGACCATTGGTATTGTATCTCTATAGGAAAATAGGAAGAACTGTGGCGGCTACTGATAAATGTAGTATTCAACCCAAAAATTTCAAACCCAGATTCTTGATTCAGTATGAGAAGCATCTTCGTGCTGGTTGTTAGATCATTCAATTTGAAGATCCCTTTCGTTTTCGCCATTCTCCTCGAGGTACCCTTCTTTAATTGGATTTCCGTCCATTCTTTTAGTCCATAATGTGATTTTCGATTTCTAGTCATGTTCTCGAGGGTCTACCTGAAGATTTATGTCTGTGTGGATTTATTGGGGATTTTGGCCAAACTAGCGTCTGGGTAGTTGTGGAATTGGTCTATTAGTGTTACGGATCACAAGTGAGTCAGTGACTTGATTTTTGGATAGTTTTGAACGGACTTCCATTAGAAATAGTGATGAATGATGATCATTGATGATAGATCCTTTAAACGAGTTACTCTATTTTCTCTAATGTATTATGAAGGACTAAATTTCTGTTGTGGAGATCCATGTAGTTTTTCTTTTTCTACAAGAACTCATTACCTTACCTCACGTTGGTTGATAATATGGCTTTTTCGGTGAAAATGCGCGAGGAGGTTCATTCATGTTTTGTGGATTCGTGCCCTGTAACCATATCTCATTACCTGGGGACTTTTGTTGCGGAGATTAATTATAATGTGTGCATTTGTTGGGGATTTCGACCTAACAAACTTCTGTTGTCTGTTGAGTTCGCTTATTAAGTATAACAGGTGTCTTAGATTTCTTTTTATGGTTGGCCATTAGCCATTTTGGTGATTATCGATGATAAATGATAATTTCTTTTAACAAGTTGCTCTATTTCACCTAATATATTTGAAAGTGTTAATTTTCTAATGCAGAGATTGACGTAATCTTTCTTCAAGACTTATTGCTTTAACTCATGTTGGTTTTTATTTGTTAGTATGTCATTTTCAAATTGCATAGGGAAACTTGATTTCAGATTTTGCTTAGAGGGAGTTGTTATTTGTGTTCCATTTTGCAACATACACGAAAATCTCTTGTATGATTAATTGCACAGACTTGTGCACTTCTCAAGTCCATGGACTTGGGTTTTGATTAGTTTTGAGGAGGATTTGCGGTGAATGAAGGAAGAAAGAAAGATGGTCTTCAAATCAGCTGCTTTTGAGTTTTCATATCTGGGACTATACTACAATTCTTTCAAAAACAGTTCTCCTTGAATTTGATTTCAAAACTATGTCAAGAGTATCATATCCAGTTTTCCGAAACTAAACCAACTTTTGGGATGAGAAAATTTTGTTAATAATTATTTTTTATTGGAGAAGATTTACGTTATATGTCAACCTGAATTGGCCTTTCCTGTTTAGAAGGTAAACTCCATCATTCTTAGAGGTAGACTTTGAGGTGGTCTAGGCATCAGTGCACTTTATTCCATCTTCTACATGAGTTTCAGAAGTTCTATATCTGTCAGTTTTCCTTGTTGAGACTGGCTATAAAATGTAGCTAGTTTGTACAATTCCGTTTTGTTTATATTTTAAGCCATTATTGTTTATCATGTGCTAAAGCATCTATATACTAGTCGCCTGTGAATGGTGGATAGCTTTCCCCTCTTCAGAGAATGGTAATGCTATTTTTCTAATATGAATTGGTTTGGCATTGAACGAAGAAGAAGACATCTGCTGTTGTCTTATAACAAAAGAAACACTTTTGTTTATTTTCTTTAAATTACAGATAAAACTCTAGGTGTGCATGGGGGGCTGTAATTCTCCATGTTATGCTGTGAAGATTGACCTGCTACATAGTTCCATGTGTAG

mRNA sequence

ATGGCAATGAAGCAATTCTTCTCCGAAGTCAAGGGCTTGAAGGTTAAGGAGCTGCCCGCCTATGTGAAGCCCATGCTCTCCATTGATTATGCCAAGAAGGCAGTGCAGAGAAGTCTCGACAATTACAACGCCAAGTACATTCAAACTGGTTCTATTGACCCTCTCTATCATGTCTGCTTTGGTGTTCTTTATATTTTGAGGGTGAAGGTGCCTCAAAGAAATCCAGAGCATTGCCATCGCTTGTGGAGTCGATTCCGGACAGAGTTTCCAAGTTCGGAGATCGAAGAAGCTGAGGCTGAGACACAGAGCGGTGACCATTGTATGAGAAGCATCTTCGTGCTGGTTGTTAGATCATTCAATTTGAAGATCCCTTTCGTTTTCGCCATTCTCCTCGAGTTCCATGTGTAG

Coding sequence (CDS)

ATGGCAATGAAGCAATTCTTCTCCGAAGTCAAGGGCTTGAAGGTTAAGGAGCTGCCCGCCTATGTGAAGCCCATGCTCTCCATTGATTATGCCAAGAAGGCAGTGCAGAGAAGTCTCGACAATTACAACGCCAAGTACATTCAAACTGGTTCTATTGACCCTCTCTATCATGTCTGCTTTGGTGTTCTTTATATTTTGAGGGTGAAGGTGCCTCAAAGAAATCCAGAGCATTGCCATCGCTTGTGGAGTCGATTCCGGACAGAGTTTCCAAGTTCGGAGATCGAAGAAGCTGAGGCTGAGACACAGAGCGGTGACCATTGTATGAGAAGCATCTTCGTGCTGGTTGTTAGATCATTCAATTTGAAGATCCCTTTCGTTTTCGCCATTCTCCTCGAGTTCCATGTGTAG

Protein sequence

MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCFGVLYILRVKVPQRNPEHCHRLWSRFRTEFPSSEIEEAEAETQSGDHCMRSIFVLVVRSFNLKIPFVFAILLEFHV

Homology

[Close]

BLAST of CaUC06G120260 vs. NCBI nr
Match: KAG6589691.1 (hypothetical protein SDJN03_15114, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-29
Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAM+QF+SE+KGLKVKELPAYVKPMLS+DY KKAVQR LDNYNAKYIQTGSIDPL HVCF
Sbjct: 1  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCF 60

Query: 61 GVLYILRVKVPQR 74
          GVLY+LRVKVPQR
Sbjct: 61 GVLYLLRVKVPQR 73

[Close]

BLAST of CaUC06G120260 vs. NCBI nr
Match: XP_038879762.1 (uncharacterized protein LOC120071511 [Benincasa hispida])

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-24
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAMKQFFSE++GLKVKELPAYVKPMLSID AKKAVQR LDNYNAKYIQTGSIDPLYHVCF
Sbjct: 1  MAMKQFFSEIRGLKVKELPAYVKPMLSIDSAKKAVQRGLDNYNAKYIQTGSIDPLYHVCF 60

Query: 61 GVL---YILRVKVPQRNPEH 78
          G +   Y++ +   +R+ EH
Sbjct: 61 GGMIFSYLVALPEERRHLEH 80

[Close]

BLAST of CaUC06G120260 vs. NCBI nr
Match: XP_022974229.1 (uncharacterized protein LOC111472849 [Cucurbita maxima])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-23
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAM+QFFSE++GLKVKELP YVKPMLSIDYAKKAVQR LDNYNAKYIQTGSIDPL HVC+
Sbjct: 1  MAMRQFFSEIRGLKVKELPGYVKPMLSIDYAKKAVQRGLDNYNAKYIQTGSIDPLLHVCY 60

Query: 61 G---VLYILRVKVPQRNPEH 78
          G   + Y++ +   +R+ EH
Sbjct: 61 GGMILSYLVALPEERRHLEH 80

[Close]

BLAST of CaUC06G120260 vs. NCBI nr
Match: XP_004146334.1 (uncharacterized protein LOC101202935 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAMKQFFSE+KGLKVKELPAYVKPMLSID AKKAV+RSLDNYNAKYIQT SIDPL HVCF
Sbjct: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHVCF 60

Query: 61 GVL---YILRVKVPQRNPEH 78
          G +   Y++ +   +R+ EH
Sbjct: 61 GGMIFSYLVALPEERRHLEH 80

[Close]

BLAST of CaUC06G120260 vs. NCBI nr
Match: KGN65836.2 (hypothetical protein Csa_019715 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1   MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
           MAMKQFFSE+KGLKVKELPAYVKPMLSID AKKAV+RSLDNYNAKYIQT SIDPL HVCF
Sbjct: 252 MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHVCF 311

Query: 61  GVL---YILRVKVPQRNPEH 78
           G +   Y++ +   +R+ EH
Sbjct: 312 GGMIFSYLVALPEERRHLEH 331

[Close]

BLAST of CaUC06G120260 vs. ExPASy TrEMBL
Match: A0A6J1IH01 (uncharacterized protein LOC111472849 OS=Cucurbita maxima OX=3661 GN=LOC111472849 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.8e-24
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAM+QFFSE++GLKVKELP YVKPMLSIDYAKKAVQR LDNYNAKYIQTGSIDPL HVC+
Sbjct: 1  MAMRQFFSEIRGLKVKELPGYVKPMLSIDYAKKAVQRGLDNYNAKYIQTGSIDPLLHVCY 60

Query: 61 G---VLYILRVKVPQRNPEH 78
          G   + Y++ +   +R+ EH
Sbjct: 61 GGMILSYLVALPEERRHLEH 80

[Close]

BLAST of CaUC06G120260 vs. ExPASy TrEMBL
Match: A0A0A0LXD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G424875 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.9e-24
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAMKQFFSE+KGLKVKELPAYVKPMLSID AKKAV+RSLDNYNAKYIQT SIDPL HVCF
Sbjct: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHVCF 60

Query: 61 GVL---YILRVKVPQRNPEH 78
          G +   Y++ +   +R+ EH
Sbjct: 61 GGMIFSYLVALPEERRHLEH 80

[Close]

BLAST of CaUC06G120260 vs. ExPASy TrEMBL
Match: A0A6J1E7G2 (uncharacterized protein LOC111430103 OS=Cucurbita moschata OX=3662 GN=LOC111430103 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.9e-24
Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAM+QF+SE+KGLKVKELPAYVKPMLS+DY KKAVQR LDNYNAKYIQTGSIDPL HVCF
Sbjct: 1  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTGSIDPLLHVCF 60

Query: 61 G---VLYILRVKVPQRNPEH 78
          G   + Y+L +   +R+  H
Sbjct: 61 GGMILSYLLALPEERRHLAH 80

[Close]

BLAST of CaUC06G120260 vs. ExPASy TrEMBL
Match: A0A5D3DYB3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002290 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAMKQFFSE+KGLKVKELPAYVKPMLSID AKK VQRSLDNY+AKYIQT SIDPL+HVCF
Sbjct: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKVVQRSLDNYHAKYIQTSSIDPLFHVCF 60

Query: 61 GVL---YILRVKVPQRNPEH 78
          G +   Y++ +   +R+ EH
Sbjct: 61 GGMIFSYLVALPEERRHLEH 80

[Close]

BLAST of CaUC06G120260 vs. ExPASy TrEMBL
Match: A0A1S3BWJ6 (uncharacterized protein LOC103494239 OS=Cucumis melo OX=3656 GN=LOC103494239 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MAMKQFFSE+KGLKVKELPAYVKPMLSID AKK VQRSLDNY+AKYIQT SIDPL+HVCF
Sbjct: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKVVQRSLDNYHAKYIQTSSIDPLFHVCF 60

Query: 61 GVL---YILRVKVPQRNPEH 78
          G +   Y++ +   +R+ EH
Sbjct: 61 GGMIFSYLVALPEERRHLEH 80

[Close]

BLAST of CaUC06G120260 vs. TAIR 10
Match: AT4G30010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 5.2e-16
Identity = 38/80 (47.50%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1  MAMKQFFSEVKGLKVKELPAYVKPMLSIDYAKKAVQRSLDNYNAKYIQTGSIDPLYHVCF 60
          MA+++ +SE++G KV ELP Y+K   S++  K +V+R LDNYN KYIQT S+DP+ H+CF
Sbjct: 1  MALRRVYSEIRGKKVTELPGYIKSTFSMETVKTSVKRGLDNYNEKYIQTSSVDPILHICF 60

Query: 61 -GVLYILRVKVP--QRNPEH 78
           G+ +   V +P  +R+ EH
Sbjct: 61 YGMAFSYLVALPNERRHLEH 80

The following BLAST results are available for this feature:

BLAST of CaUC06G120260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589691.1	2.2e-29	89.04	hypothetical protein SDJN03_15114, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038879762.1	1.3e-24	76.25	uncharacterized protein LOC120071511 [Benincasa hispida]	[more]
XP_022974229.1	1.4e-23	72.50	uncharacterized protein LOC111472849 [Cucurbita maxima]	[more]
XP_004146334.1	1.8e-23	75.00	uncharacterized protein LOC101202935 [Cucumis sativus]	[more]
KGN65836.2	1.8e-23	75.00	hypothetical protein Csa_019715 [Cucumis sativus]	[more]

BLAST of CaUC06G120260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G120260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IH01	6.8e-24	72.50	uncharacterized protein LOC111472849 OS=Cucurbita maxima OX=3661 GN=LOC111472849...	[more]
A0A0A0LXD4	8.9e-24	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G424875 PE=4 SV=1	[more]
A0A6J1E7G2	8.9e-24	72.50	uncharacterized protein LOC111430103 OS=Cucurbita moschata OX=3662 GN=LOC1114301...	[more]
A0A5D3DYB3	1.5e-23	73.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BWJ6	1.5e-23	73.75	uncharacterized protein LOC103494239 OS=Cucumis melo OX=3656 GN=LOC103494239 PE=...	[more]

BLAST of CaUC06G120260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30010.1	5.2e-16	47.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36059:SF2	OS02G0175800 PROTEIN	coord: 1..64
None	No IPR available	PANTHER	PTHR36059	OS02G0175800 PROTEIN	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G120260.1	CaUC06G120260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus