CaUC06G119480 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G119480
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr06: 24382899 .. 24383665 (+)
RNA-Seq Expression	CaUC06G119480
Synteny	CaUC06G119480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGAAAATGGTGGATGTTAGTGGCGGCGGCGGGATTGGTAAGAAGAGACTCATCAAGCGGAGCAAGAAGAAAAGCATTCACAAAGTGATCCATTATCTGTTATCGGATTGCTACTTATATGCACCTATCCTCATTTCTCCTTCACCCATTAATTCTCATGCCGCACCCACAAGAGGTTTCTTCCACTTCTCTTTTCCTGCACCATTTTATTAACTTTCTCTGAAATGGGTTTCTTAATTAGGGATTGAAATTAGAGAACGCACAAAAGACAACCGGAGTTTGGTGAAGAAGATTCAGGATTATTTGAAATCTGATTGTTACATGTATGCTTCTTTGCTTGCACCACATTCCCACAGACTTAGACTCAGAGGTATATAATTTCAATTTCCATACAGTTAAATTAACTAATAGATTCTCAATTTGTTCAATCGTGTGTGCTTCTTGTTTGGAGTTTAAGTTTAATTTTAATTTTGTAAAATAGAGAAGGGAGAAACAGGGCGTGTTGGGTACGTAAAGAAGGTAAGTAAGGAAGTAATGGTTGTGTCTGATTTTGTGGAAGCAACGGTTGAATCATCCAAGCGCTCCATCTATCCTAATTCTCCATCTATATCAATTTCAGGTCCAATTTTCTAAACATTATTTCAAGCTTTTATTTTCAATTGTTATGTTTTATATTTATTTATTTATTTTTGGTTGGTTTTTATAGGTGAGCGTGACCCAAAGATGAGGAGGATTGTTGTTGATTAAGCTTTTGTTAGAAC

mRNA sequence

ATGGCGAAGAAAATGGTGGATGTTAGTGGCGGCGGCGGGATTGGTAAGAAGAGACTCATCAAGCGGAGCAAGAAGAAAAGCATTCACAAAGTGATCCATTATCTGTTATCGGATTGCTACTTATATGCACCTATCCTCATTTCTCCTTCACCCATTAATTCTCATGCCGCACCCACAAGAGGGATTGAAATTAGAGAACGCACAAAAGACAACCGGAGTTTGGTGAAGAAGATTCAGGATTATTTGAAATCTGATTGTTACATGTATGCTTCTTTGCTTGCACCACATTCCCACAGACTTAGACTCAGAGAGAAGGGAGAAACAGGGCGTGTTGGGTACGTAAAGAAGGTAAGTAAGGAAGTAATGGTTGTGTCTGATTTTGTGGAAGCAACGGTTGAATCATCCAAGCGCTCCATCTATCCTAATTCTCCATCTATATCAATTTCAGGTGAGCGTGACCCAAAGATGAGGAGGATTGTTGTTGATTAAGCTTTTGTTAGAAC

Coding sequence (CDS)

ATGGCGAAGAAAATGGTGGATGTTAGTGGCGGCGGCGGGATTGGTAAGAAGAGACTCATCAAGCGGAGCAAGAAGAAAAGCATTCACAAAGTGATCCATTATCTGTTATCGGATTGCTACTTATATGCACCTATCCTCATTTCTCCTTCACCCATTAATTCTCATGCCGCACCCACAAGAGGGATTGAAATTAGAGAACGCACAAAAGACAACCGGAGTTTGGTGAAGAAGATTCAGGATTATTTGAAATCTGATTGTTACATGTATGCTTCTTTGCTTGCACCACATTCCCACAGACTTAGACTCAGAGAGAAGGGAGAAACAGGGCGTGTTGGGTACGTAAAGAAGGTAAGTAAGGAAGTAATGGTTGTGTCTGATTTTGTGGAAGCAACGGTTGAATCATCCAAGCGCTCCATCTATCCTAATTCTCCATCTATATCAATTTCAGGTGAGCGTGACCCAAAGATGAGGAGGATTGTTGTTGATTAA

Protein sequence

MAKKMVDVSGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPINSHAAPTRGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLRLREKGETGRVGYVKKVSKEVMVVSDFVEATVESSKRSIYPNSPSISISGERDPKMRRIVVD

Homology

[Close]

BLAST of CaUC06G119480 vs. NCBI nr
Match: XP_038880614.1 (uncharacterized protein LOC120072259 [Benincasa hispida])

HSP 1 Score: 268.5 bits (685), Expect = 3.8e-68
Identity = 140/167 (83.83%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MAKKMVDVSGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPINSHAAPTR 60
           MAKKMV V+GGGGIGK+RLIKRSKKKS+HKVI Y+LSDCYL+AP+L SPSPINSHA PTR
Sbjct: 23  MAKKMVHVNGGGGIGKRRLIKRSKKKSLHKVIDYMLSDCYLFAPLLSSPSPINSHAVPTR 82

Query: 61  GIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLRLREKGETGRVGYVKKVSKE 120
           GIEIRERTKDNRSL K IQDYLKSDCYMYASLLAP S RL+LREKGETG VGYVKKV KE
Sbjct: 83  GIEIRERTKDNRSLAKTIQDYLKSDCYMYASLLAPQSLRLKLREKGETGHVGYVKKVRKE 142

Query: 121 VMVVSDFVEATV-----ESSKRSIYPNSPSISISGERDPKMRRIVVD 163
           VMV++DFVEATV     ESSKRSIY  SPSISISGERDPK RRIVVD
Sbjct: 143 VMVMTDFVEATVNGTPTESSKRSIYATSPSISISGERDPKTRRIVVD 189

[Close]

BLAST of CaUC06G119480 vs. NCBI nr
Match: XP_008443802.1 (PREDICTED: uncharacterized protein LOC103487306 isoform X1 [Cucumis melo] >TYJ95950.1 uncharacterized protein E5676_scaffold271G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 4.7e-58
Identity = 131/167 (78.44%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MAKKMVDV--SGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAA 60
           MAKKMV V   GGGGIGKKRLIKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PTRGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLRLREKGETGRVGYVKKV 120
           PTRGIEIR RTKDNRSLVKK QDYLKSDCYMYASL+ P S   RLREKGETGRV Y KKV
Sbjct: 61  PTRGIEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSP--RLREKGETGRVEYAKKV 120

Query: 121 SKEVMVVSDFVEATVESS-KRSIYPNSPSISISGERDPKM-RRIVVD 163
           S EV+V+S+FVEATV  + +RSIY NSPS+++SGERDPK+ RRIVVD
Sbjct: 121 SGEVVVMSNFVEATVSGTPQRSIYSNSPSLTLSGERDPKVRRRIVVD 165

[Close]

BLAST of CaUC06G119480 vs. NCBI nr
Match: XP_008443803.1 (PREDICTED: uncharacterized protein LOC103487306 isoform X2 [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-48
Identity = 111/140 (79.29%), Postives = 119/140 (85.00%), Query Frame = 0


Query: 1   MAKKMVDV--SGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAA 60
           MAKKMV V   GGGGIGKKRLIKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PTRGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLRLREKGETGRVGYVKKV 120
           PTRGIEIR RTKDNRSLVKK QDYLKSDCYMYASL+ P S   RLREKGETGRV Y KKV
Sbjct: 61  PTRGIEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSP--RLREKGETGRVEYAKKV 120

Query: 121 SKEVMVVSDFVEATVESSKR 138
           S EV+V+S+FVEATV  ++R
Sbjct: 121 SGEVVVMSNFVEATVSVTQR 138

[Close]

BLAST of CaUC06G119480 vs. NCBI nr
Match: XP_008443804.1 (PREDICTED: uncharacterized protein LOC103487306 isoform X3 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 6.0e-37
Identity = 87/104 (83.65%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MAKKMVDV--SGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAA 60
           MAKKMV V   GGGGIGKKRLIKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PTRGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLR 102
           PTRGIEIR RTKDNRSLVKK QDYLKSDCYMYASL+ P S RLR
Sbjct: 61  PTRGIEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSPRLR 104

[Close]

BLAST of CaUC06G119480 vs. NCBI nr
Match: XP_031736067.1 (uncharacterized protein LOC105435617 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 2.8e-34
Identity = 83/106 (78.30%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MAKKMVDVSGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAAPT 60
           MAKKMV VS  GGIGKKR IKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  PT
Sbjct: 1   MAKKMVHVS--GGIGKKRRIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPIDNSHVTPT 60

Query: 61  RGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLRLREK 106
           RGIEIR RTKD+R+LVKK QDYL+SDCYMYASL+ P S RLR R +
Sbjct: 61  RGIEIRGRTKDSRTLVKKFQDYLQSDCYMYASLVTPKSPRLRGRNR 104

[Close]

BLAST of CaUC06G119480 vs. ExPASy TrEMBL
Match: A0A5D3B7P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00120 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.3e-58
Identity = 131/167 (78.44%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MAKKMVDV--SGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAA 60
           MAKKMV V   GGGGIGKKRLIKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PTRGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLRLREKGETGRVGYVKKV 120
           PTRGIEIR RTKDNRSLVKK QDYLKSDCYMYASL+ P S   RLREKGETGRV Y KKV
Sbjct: 61  PTRGIEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSP--RLREKGETGRVEYAKKV 120

Query: 121 SKEVMVVSDFVEATVESS-KRSIYPNSPSISISGERDPKM-RRIVVD 163
           S EV+V+S+FVEATV  + +RSIY NSPS+++SGERDPK+ RRIVVD
Sbjct: 121 SGEVVVMSNFVEATVSGTPQRSIYSNSPSLTLSGERDPKVRRRIVVD 165

[Close]

BLAST of CaUC06G119480 vs. ExPASy TrEMBL
Match: A0A1S3B8Y3 (uncharacterized protein LOC103487306 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487306 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.3e-58
Identity = 131/167 (78.44%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MAKKMVDV--SGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAA 60
           MAKKMV V   GGGGIGKKRLIKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PTRGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLRLREKGETGRVGYVKKV 120
           PTRGIEIR RTKDNRSLVKK QDYLKSDCYMYASL+ P S   RLREKGETGRV Y KKV
Sbjct: 61  PTRGIEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSP--RLREKGETGRVEYAKKV 120

Query: 121 SKEVMVVSDFVEATVESS-KRSIYPNSPSISISGERDPKM-RRIVVD 163
           S EV+V+S+FVEATV  + +RSIY NSPS+++SGERDPK+ RRIVVD
Sbjct: 121 SGEVVVMSNFVEATVSGTPQRSIYSNSPSLTLSGERDPKVRRRIVVD 165

[Close]

BLAST of CaUC06G119480 vs. ExPASy TrEMBL
Match: A0A1S3B9M0 (uncharacterized protein LOC103487306 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487306 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-48
Identity = 111/140 (79.29%), Postives = 119/140 (85.00%), Query Frame = 0


Query: 1   MAKKMVDV--SGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAA 60
           MAKKMV V   GGGGIGKKRLIKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PTRGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLRLREKGETGRVGYVKKV 120
           PTRGIEIR RTKDNRSLVKK QDYLKSDCYMYASL+ P S   RLREKGETGRV Y KKV
Sbjct: 61  PTRGIEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSP--RLREKGETGRVEYAKKV 120

Query: 121 SKEVMVVSDFVEATVESSKR 138
           S EV+V+S+FVEATV  ++R
Sbjct: 121 SGEVVVMSNFVEATVSVTQR 138

[Close]

BLAST of CaUC06G119480 vs. ExPASy TrEMBL
Match: A0A1S3B9N8 (uncharacterized protein LOC103487306 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487306 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.9e-37
Identity = 87/104 (83.65%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MAKKMVDV--SGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAA 60
           MAKKMV V   GGGGIGKKRLIKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PTRGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLR 102
           PTRGIEIR RTKDNRSLVKK QDYLKSDCYMYASL+ P S RLR
Sbjct: 61  PTRGIEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSPRLR 104

[Close]

BLAST of CaUC06G119480 vs. ExPASy TrEMBL
Match: A0A0A0LTL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294060 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.3e-34
Identity = 82/102 (80.39%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 1   MAKKMVDVSGGGGIGKKRLIKRSKKKSIHKVIHYLLSDCYLYAPILISPSPI-NSHAAPT 60
           MAKKMV VS  GGIGKKR IKRSKKK IHKVI YLLSDCYL+AP+LISPSPI NSH  PT
Sbjct: 1   MAKKMVHVS--GGIGKKRRIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPIDNSHVTPT 60

Query: 61  RGIEIRERTKDNRSLVKKIQDYLKSDCYMYASLLAPHSHRLR 102
           RGIEIR RTKD+R+LVKK QDYL+SDCYMYASL+ P S RLR
Sbjct: 61  RGIEIRGRTKDSRTLVKKFQDYLQSDCYMYASLVTPKSPRLR 100

[Close]

BLAST of CaUC06G119480 vs. TAIR 10
Match: AT5G57790.1 (unknown protein; Has 13 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-07
Identity = 29/99 (29.29%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 14  IGKKRLIKRSK-KKSIHKVIHYLLSDCYLYAPI----------LISPSPINSHAAPTRGI 73
           +G ++ +KR K ++ +  ++ YL SD YL+AP+          + +P P NS  +    I
Sbjct: 9   LGARKKLKRKKCRRLVRSIVTYLKSDTYLFAPLFSNFPPLTTEIDTPPPSNSKPSTVDDI 68

Query: 74  EIR-------ERTKDNRSLVKKIQDYLKSDCYMYASLLA 95
            +        E+    R + +K+++YLKSDCYMY+ +++
Sbjct: 69  SMEGFESLGIEKLIKKRRMSEKVKEYLKSDCYMYSPMIS 107

[Close]

BLAST of CaUC06G119480 vs. TAIR 10
Match: AT5G57790.2 (unknown protein; Has 13 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-07
Identity = 29/99 (29.29%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 14  IGKKRLIKRSK-KKSIHKVIHYLLSDCYLYAPI----------LISPSPINSHAAPTRGI 73
           +G ++ +KR K ++ +  ++ YL SD YL+AP+          + +P P NS  +    I
Sbjct: 9   LGARKKLKRKKCRRLVRSIVTYLKSDTYLFAPLFSNFPPLTTEIDTPPPSNSKPSTVDDI 68

Query: 74  EIR-------ERTKDNRSLVKKIQDYLKSDCYMYASLLA 95
            +        E+    R + +K+++YLKSDCYMY+ +++
Sbjct: 69  SMEGFESLGIEKLIKKRRMSEKVKEYLKSDCYMYSPMIS 107

The following BLAST results are available for this feature:

BLAST of CaUC06G119480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880614.1	3.8e-68	83.83	uncharacterized protein LOC120072259 [Benincasa hispida]	[more]
XP_008443802.1	4.7e-58	78.44	PREDICTED: uncharacterized protein LOC103487306 isoform X1 [Cucumis melo] >TYJ95...	[more]
XP_008443803.1	2.6e-48	79.29	PREDICTED: uncharacterized protein LOC103487306 isoform X2 [Cucumis melo]	[more]
XP_008443804.1	6.0e-37	83.65	PREDICTED: uncharacterized protein LOC103487306 isoform X3 [Cucumis melo]	[more]
XP_031736067.1	2.8e-34	78.30	uncharacterized protein LOC105435617 [Cucumis sativus]	[more]

BLAST of CaUC06G119480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G119480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B7P7	2.3e-58	78.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B8Y3	2.3e-58	78.44	uncharacterized protein LOC103487306 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B9M0	1.3e-48	79.29	uncharacterized protein LOC103487306 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B9N8	2.9e-37	83.65	uncharacterized protein LOC103487306 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LTL8	2.3e-34	80.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294060 PE=4 SV=1	[more]

BLAST of CaUC06G119480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57790.1	4.0e-07	29.29	unknown protein; Has 13 Blast hits to 11 proteins in 5 species: Archae - 0; Bact...	[more]
AT5G57790.2	4.0e-07	29.29	unknown protein; Has 13 Blast hits to 11 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36811	OS08G0444440 PROTEIN	coord: 13..122
None	No IPR available	PANTHER	PTHR36811:SF2	OS08G0444440 PROTEIN	coord: 13..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G119480.1	CaUC06G119480.1	mRNA