CaUC06G118780 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G118780
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr06: 23589199 .. 23590781 (+)
RNA-Seq ExpressionCaUC06G118780
SyntenyCaUC06G118780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGTATCATCCCTGTATTAATATATGCTTTAAAATTATATTTATGATTTGCTTTTGTTGATTGTAAGTAAAACTTTTTCGTAAAATTCAACTTCTCTATAGAGATGTGATTAATTGGTAATAGGTACAACGACTTTTACTCTTGTTACTCATGTTAACCTATTTTCGAAATGATGATTAAGCCGAGTAGCGTAAAATGGAGGCACTACAATTTATTTATTTATTTATTTATTTTTTCTTTTCTTCAAGAGCTCGGGAGAAATTAGAATTGAGATTAAATATCCCAAGAATCTATGTTGGGATGTTCATAGGGCAAGGTGAGAATGAGATGACTTCCTGCCTCAATTTTCTAGTTAAATTTTGTAAGGATTGAGCTTCCTTGTAGAAGTCAATCCACCTTTTTGTAAAAAAAGGAAATCAATATTAAATTGGATAAATTCTATTTGAAGTGTTTTGAATTAAAGCCACGTCTATACTAGATGAAAGGTAATCTATTAATAGTAATGTAAAAAGTGAGCCCTAGTTGATTACTTTTGTTATTGTTTACCTACATTTTGTAATCTTATTGAATTATGGGATCTACCTTAAAATTTGTAATCGAATCATGCAATCTAACTAAAGAATCAAGGGTGCTCAATCTGACTGTGCTTGAAAATTACGTTAGACCCATTACTTTTACCGTTACCGTCACAAATATTGTTACTGTAACAATATGAAAATTATGAACCTATCACATTTATTGTTACATTTACCTTTATCATTACCCTTATTATTACCGTTAGGGTCAAGCAGTAACGGTCGTGATAACGGTAACAGTAAATTGTGACAAATTCATAATTTTAAGTAAACGCAATCAAAAGCAATCTATCCAATCATGTCTCTACCATCTGTTTCTCCCTCCTTTTTCTCTGGCTAGCATGATAAGGAGAAGCGTTTGCAATTAAGGTCTATTACGATTTATTCATTAATAAAATCTCATTCTGATTATACCAATTTTCATTATGGTTTGATAAACATGATCTAAATAGTTAATTTTTTACTAGTTAAATTAATATTATACATGGAGAATCTTCATTAATAGAGAGGTTTCTTAAATCTCCTAATAGAATATATAAATAAATAACCATCACTTGCTCCGATTGCTCAATGGAAATACAAAAGAGTTCTTATTCTTAGTGTCATAGCCATAGTCAAAGTCAAAGGTCCTAGAAAGAAGGTGTCTTTTTTTAATTATTTTTTCTTATATGGAGAAAGGTTGACTTTTTCTGTTCATTTCATCTTTATGGCAAAAAGGTGATGAACTCTCCTATCCATTAATTCTGAAAAAATTTCCAGCAAAAACAAAGAATTGTTGACATACTTTTGAATACCAAAATTTTTGTTGCCAATAAAATGAAACATAAAAATGAAGAGCACAAGAGAAAACGACAGCTTCCCCTTACAGAACAGAACAAGTTCCATCACGAAGCCGTGTGGAAGAAACTAACCAAAAAAGTCTTGACAATTTGAAAAGCCCCATCACATCACACCATACATTATTCCAGAAGGTTGCTACAATGTTACTTACAATGCTACACTGA

mRNA sequence

ATGGGTAGCTCGGGAGAAATTAGAATTGAGATTAAATATCCCAAGAATCTATGTTGGGATGTTCATAGGGCAAGAGCACAAGAGAAAACGACAGCTTCCCCTTACAGAACAGAACAAGTTCCATCACGAAGCCGTGTGGAAGAAACTAACCAAAAAAGTCTTGACAATTTGAAAAGCCCCATCACATCACACCATACATTATTCCAGAAGGTTGCTACAATGTTACTTACAATGCTACACTGA

Coding sequence (CDS)

ATGGGTAGCTCGGGAGAAATTAGAATTGAGATTAAATATCCCAAGAATCTATGTTGGGATGTTCATAGGGCAAGAGCACAAGAGAAAACGACAGCTTCCCCTTACAGAACAGAACAAGTTCCATCACGAAGCCGTGTGGAAGAAACTAACCAAAAAAGTCTTGACAATTTGAAAAGCCCCATCACATCACACCATACATTATTCCAGAAGGTTGCTACAATGTTACTTACAATGCTACACTGA

Protein sequence

MGSSGEIRIEIKYPKNLCWDVHRARAQEKTTASPYRTEQVPSRSRVEETNQKSLDNLKSPITSHHTLFQKVATMLLTMLH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G118780.1CaUC06G118780.1mRNA