CaUC06G117910 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTTTCAAAAAGAGTACACAACCTTTTCTATGATTTTCTTTTTGCTTCCCTCACACACCCACTCTAAGGCTTGGACTTGAAAAGCATCGAAAGTTTTTGGTACTTAGCTCACTCGAAGGTATGAACTTGGAACCTCCAACTTGGTATCACCAAGAGTGTAGGATTTTTGTGTAGTGCCACATATCGGAATGACTCAAAAATGTAATGGACTCCAAACATTATGAAAGGATCCTCTGACTTTATTTCAAATCATTCTAATTAAAAATACAAGGATATACTAACTCTAGCTATGTGAGTCGCATATAAAGCTACGAAAGAATGTTTTTCTTGTCATCAGAGTTGAGGAGAGAATTTTGTATGATGATAATAATTTTTCATACAAAAAAAATTATTTTGGATAGGTTGTGATTTTTTCTCCAATTTTGAAATTTTCTACTAAATTCTTTTGTTTCCTATTATTATTGCTTTCATATATATATATATATATACACATACCATCATTAACCAAGACAAACAAAATATCTTGTGATGGTTAGTGCCGACAGGTTTTTCCCAATAGAAAGACTCTAACTCTAAGCTCTTGCCAACAAGGCCCTCCCTTGGAGGCCTAACCATTTATATGTTAAGAATAAAGAGATAATCAAAGGATAGAATGTGCAATTACTTTAACCCAAAATTTCTCAACATGAGTTTCATATATATATATACGCATATGTGTGCGCGCGCGCAGCAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAGGAAGAAAGAAAGAAAGAAAAGAAAAGAAATATATGTGTGAAAGTGGGGACCACATTCAAAACTCTGATTGCAACACCCAAAACAAACCACTTTTCCTAGAAAAGAGGTTTATTGGCTTCTGACTTTGGTCAAAAAAACCCACAATTGGAAAGGAAACATTGCATAAATTTTTTGTATTGATGACAGAGGACGAAAATGTTGCATCCTTGTTCTTGAAAACACAGACAAAAGTGGATGGGTTTCGTTCCTATCTATGATCACGTTCAAGACAGAAACAGAAGTAAGGAAAACCTATTACCAAGAATCATCCAGCAAAAGAAGCGACATAGCTTCCTACACATCACACTCAGATGAAGGTAGCCCAAAACGCACGTATGCGAAAGTCCTTTCACCACAGAGCTCCCTTGCCACAAGCCCAAGGAAGAACATCAATGATATCCTCTACAACAGTGATACCTTAAAAATTGAAGATGAGGAGGATCTTGGTTAGGATCACGCATTCATCGTCATCAGACATTGCTTCCACGATGATTGGACTAAAATATTTGCTAAGCTAAGGGCAAACGAAATCGACATTGAAGTACAAACCATTTAATGCAGAAAAAGCTATTGCTTTCACAAAAGATAAGGAGCAGATCAAGATGCTTTGCAGACAGAAACAAGGGTTGGGTTACCGTTGGACACTTCTATGTCAAATTCGAACCTTGGATGGCATCTATACATGCAACCCCGAAACTGATTCCTAG ATGAAAGGACGAAAATGTTGCATCCTTGTTCTTGAAAACACAGACAAAAGTGGATGGGTTTCGTTCCTATCTATGATCACGTTCAAGACAGAAACAGAAGTAAGGAAAACCTATTACCAAGAATCATCCAGCAAAAGAAGCGACATAGCTTCCTACACATCACACTCAGATGAAGGTAGCCCAAAACGCACGTATGCGAAAGTCCTTTCACCACAGAGCTCCCTTGCCACAAGCCCAAGGAAGAACATCAATGATATCCTCTACAACAGTGATACCTTAAAAATTGAAGATGAGGAGGATCTTGGGCAAACGAAATCGACATTGAAGTACAAACCATTTAATGCAGAAAAAGCTATTGCTTTCACAAAAGATAAGGAGCAGATCAAGATGCTTTGCAGACAGAAACAAGGGTTGGGTTACCGTTGGACACTTCTATGTCAAATTCGAACCTTGGATGGCATCTATACATGCAACCCCGAAACTGATTCCTAG ATGAAAGGACGAAAATGTTGCATCCTTGTTCTTGAAAACACAGACAAAAGTGGATGGGTTTCGTTCCTATCTATGATCACGTTCAAGACAGAAACAGAAGTAAGGAAAACCTATTACCAAGAATCATCCAGCAAAAGAAGCGACATAGCTTCCTACACATCACACTCAGATGAAGGTAGCCCAAAACGCACGTATGCGAAAGTCCTTTCACCACAGAGCTCCCTTGCCACAAGCCCAAGGAAGAACATCAATGATATCCTCTACAACAGTGATACCTTAAAAATTGAAGATGAGGAGGATCTTGGGCAAACGAAATCGACATTGAAGTACAAACCATTTAATGCAGAAAAAGCTATTGCTTTCACAAAAGATAAGGAGCAGATCAAGATGCTTTGCAGACAGAAACAAGGGTTGGGTTACCGTTGGACACTTCTATGTCAAATTCGAACCTTGGATGGCATCTATACATGCAACCCCGAAACTGATTCCTAG MKGRKCCILVLENTDKSGWVSFLSMITFKTETEVRKTYYQESSSKRSDIASYTSHSDEGSPKRTYAKVLSPQSSLATSPRKNINDILYNSDTLKIEDEEDLGQTKSTLKYKPFNAEKAIAFTKDKEQIKMLCRQKQGLGYRWTLLCQIRTLDGIYTCNPETDS Homology
BLAST of CaUC06G117910 vs. NCBI nr
Match: KAA0044449.1 (hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 2.7e-13 Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 0
BLAST of CaUC06G117910 vs. NCBI nr
Match: TYK29576.1 (hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 2.7e-13 Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 0
BLAST of CaUC06G117910 vs. NCBI nr
Match: KAA0055987.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 3.7e-10 Identity = 57/147 (38.78%), Postives = 75/147 (51.02%), Query Frame = 0
BLAST of CaUC06G117910 vs. NCBI nr
Match: TYK18363.1 (hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-09 Identity = 57/171 (33.33%), Postives = 81/171 (47.37%), Query Frame = 0
BLAST of CaUC06G117910 vs. NCBI nr
Match: KAA0044557.1 (hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-09 Identity = 57/171 (33.33%), Postives = 81/171 (47.37%), Query Frame = 0
BLAST of CaUC06G117910 vs. ExPASy TrEMBL
Match: A0A5D3E0Y8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001820 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.3e-13 Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 0
BLAST of CaUC06G117910 vs. ExPASy TrEMBL
Match: A0A5A7TTA1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001820 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.3e-13 Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 0
BLAST of CaUC06G117910 vs. ExPASy TrEMBL
Match: A0A5A7UN08 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001290 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.8e-10 Identity = 57/147 (38.78%), Postives = 75/147 (51.02%), Query Frame = 0
BLAST of CaUC06G117910 vs. ExPASy TrEMBL
Match: A0A5D3D494 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00820 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 5.2e-10 Identity = 57/171 (33.33%), Postives = 81/171 (47.37%), Query Frame = 0
BLAST of CaUC06G117910 vs. ExPASy TrEMBL
Match: A0A5A7TRS9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003060 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 6.8e-10 Identity = 57/171 (33.33%), Postives = 81/171 (47.37%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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