CaUC06G117670 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G117670
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr06: 22191658 .. 22192131 (+)
RNA-Seq Expression	CaUC06G117670
Synteny	CaUC06G117670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACAAATCCAAAAGGAAGCAAGCAATTTCCATGGAAGAAGAACAATCAAGAGCGGCAAAAGATGGTCATAGCAATCTATATGACTCTCAAGAATTTAAGGCTATGATTGGTCACCTCAACAAAGCCATTCATTCCAATCACAATGTTTTATCTAACCATTTGATCAATTCACCATTTTATCGTCAGCGTTTGAATGAAATTTATAAAGATAGTATTGGCTCGACTAAGAGGATCATGTGGTATCAAACAGGTGATTATTTTATCTTATATTTTTAAATTTTAACTTCAATTTTAGGTTAGAAATATATATTTTAACTAATTGAGCTATATTCACGTGGACAATAAAAAGGAACAATTGACACGACCAAAAGAACCACAAAGCAAAGGGGGATGATATCAAATGTATCACTTGTTGGGAAGCTATGGAAACAAATTAAGGTAGGGCTAATGGGCATTCTTCCAAAGAAAGAT

mRNA sequence

CTTCACAAATCCAAAAGGAAGCAAGCAATTTCCATGGAAGAAGAACAATCAAGAGCGGCAAAAGATGGTCATAGCAATCTATATGACTCTCAAGAATTTAAGGCTATGATTGGTCACCTCAACAAAGCCATTCATTCCAATCACAATGTTTTATCTAACCATTTGATCAATTCACCATTTTATCGTCAGCGTTTGAATGAAATTTATAAAGATAGTATTGGCTCGACTAAGAGGATCATGTGGTATCAAACAGGAACAATTGACACGACCAAAAGAACCACAAAGCAAAGGGGGATGATATCAAATGTATCACTTGTTGGGAAGCTATGGAAACAAATTAAGGTAGGGCTAATGGGCATTCTTCCAAAGAAAGAT

Coding sequence (CDS)

CTTCACAAATCCAAAAGGAAGCAAGCAATTTCCATGGAAGAAGAACAATCAAGAGCGGCAAAAGATGGTCATAGCAATCTATATGACTCTCAAGAATTTAAGGCTATGATTGGTCACCTCAACAAAGCCATTCATTCCAATCACAATGTTTTATCTAACCATTTGATCAATTCACCATTTTATCGTCAGCGTTTGAATGAAATTTATAAAGATAGTATTGGCTCGACTAAGAGGATCATGTGGTATCAAACAGGAACAATTGACACGACCAAAAGAACCACAAAGCAAAGGGGGATGATATCAAATGTATCACTTGTTGGGAAGCTATGGAAACAAATTAAGGTAGGGCTAATGGGCATTCTTCCAAAGAAAGAT

Protein sequence

LHKSKRKQAISMEEEQSRAAKDGHSNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLINSPFYRQRLNEIYKDSIGSTKRIMWYQTGTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD

Homology

[Close]

BLAST of CaUC06G117670 vs. NCBI nr
Match: KGN53885.1 (hypothetical protein Csa_011823 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42
Identity = 94/118 (79.66%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 12  MEEEQSRAAKDGHSNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLINSPFYRQRLNEIYKD 71
           MEE+QS A KD HSNLYD QEFKAMIGHLNKA H + +VLSNHLINSPFYRQRLNEIYK+
Sbjct: 1   MEEQQSGAPKDCHSNLYDYQEFKAMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN 60

Query: 72  SIGSTKRIMWYQT----GTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 126
           SIGSTK+IMWY+T    G I+T+KR TKQRGMISN SL G+LWKQIKVGLMGILPKKD
Sbjct: 61  SIGSTKKIMWYETGRQKGNIETSKRRTKQRGMISNASLAGRLWKQIKVGLMGILPKKD 118

[Close]

BLAST of CaUC06G117670 vs. NCBI nr
Match: EEF47791.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-05
Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 25  SNLYDSQEFKAMIGHLNKAIHSNHNVLSNHL--INSPFYRQRLNEIYKDSIGSTKRIMWY 84
           S LYDS EF+A+   LNKA+ S ++     +  + SPFY  RL+ IYK++  + KRIM  
Sbjct: 44  STLYDSYEFRAVTEQLNKAMQSLNSSSPTFMSYLKSPFYSHRLDSIYKENSETQKRIMCS 103

Query: 85  QTGTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLM 119
           +     + K+ +++   + +     +LWK+IK GL+
Sbjct: 104 RINQRYSDKKASRKGSRVMSGGFASRLWKKIKEGLL 139

[Close]

BLAST of CaUC06G117670 vs. NCBI nr
Match: KDP31321.1 (hypothetical protein JCGZ_11697 [Jatropha curcas])

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-05
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 25  SNLYDSQEFKAMIGHLNKAIHS---NHNVLSNHLINSPFYRQRLNEIYKDSIGSTKRIMW 84
           S LYDS E +A+   LNKAI S   +   L ++L  SPFY QRL+ IYK++  + K+IM 
Sbjct: 44  STLYDSFELRAVTNQLNKAIQSLNCSSPTLMSYL-KSPFYGQRLDSIYKENAKTPKKIMG 103

Query: 85  YQTGTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 126
            Q       KR ++  G      L+ +LWK++K GL+    + D
Sbjct: 104 SQLARRSIDKRASRTAG----GGLMSRLWKKVKQGLLWSKQRND 142

[Close]

BLAST of CaUC06G117670 vs. NCBI nr
Match: KAF3968219.1 (hypothetical protein CMV_007858 [Castanea mollissima])

HSP 1 Score: 58.9 bits (141), Expect = 3.6e-05
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 25  SNLYDSQEFKAMIGHLNKAIHSNHNVLSN----HLINSPFYRQRLNEIYKDSIGSTKRIM 84
           S LYDS E +A+   LNKAI ++ NV S     HL NSPFYRQ+L  IYK++  +++R  
Sbjct: 38  STLYDSFELRAITHQLNKAIQAS-NVSSPPYLCHLKNSPFYRQQLGHIYKENAQTSRRAS 97

Query: 85  WYQTGTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 126
                     KR +       +   V +LWK++K GL+    KKD
Sbjct: 98  SSLPAHAVLDKRMSMAETNKGSGGFVTQLWKKVKQGLLRNKQKKD 141

[Close]

BLAST of CaUC06G117670 vs. NCBI nr
Match: KAE8124422.1 (hypothetical protein FH972_019310 [Carpinus fangiana])

HSP 1 Score: 58.2 bits (139), Expect = 6.1e-05
Identity = 40/106 (37.74%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 25  SNLYDSQEFKAMIGHLNKAIHSNHNVLS-----NHLINSPFYRQRLNEIYKDSIGSTKRI 84
           S LYDS E +AM   LNKAIH + NV S      HL NSP YR  L+ IY++S  + +RI
Sbjct: 35  STLYDSFELRAMTRQLNKAIHGS-NVSSPPPYIRHL-NSPLYRLGLDRIYRESTKTPRRI 94

Query: 85  MWYQTGTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 126
               +      KR   +   +     V +LWK++K GL+    +K+
Sbjct: 95  SCSPSANAVVNKRMGMKHTRVDTGGFVTRLWKKVKQGLLRNKQRKE 138

[Close]

BLAST of CaUC06G117670 vs. ExPASy TrEMBL
Match: A0A0A0KW83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179690 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.1e-43
Identity = 94/118 (79.66%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 12  MEEEQSRAAKDGHSNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLINSPFYRQRLNEIYKD 71
           MEE+QS A KD HSNLYD QEFKAMIGHLNKA H + +VLSNHLINSPFYRQRLNEIYK+
Sbjct: 1   MEEQQSGAPKDCHSNLYDYQEFKAMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN 60

Query: 72  SIGSTKRIMWYQT----GTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 126
           SIGSTK+IMWY+T    G I+T+KR TKQRGMISN SL G+LWKQIKVGLMGILPKKD
Sbjct: 61  SIGSTKKIMWYETGRQKGNIETSKRRTKQRGMISNASLAGRLWKQIKVGLMGILPKKD 118

[Close]

BLAST of CaUC06G117670 vs. ExPASy TrEMBL
Match: B9RLR6 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1470430 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.0e-05
Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 25  SNLYDSQEFKAMIGHLNKAIHSNHNVLSNHL--INSPFYRQRLNEIYKDSIGSTKRIMWY 84
           S LYDS EF+A+   LNKA+ S ++     +  + SPFY  RL+ IYK++  + KRIM  
Sbjct: 44  STLYDSYEFRAVTEQLNKAMQSLNSSSPTFMSYLKSPFYSHRLDSIYKENSETQKRIMCS 103

Query: 85  QTGTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLM 119
           +     + K+ +++   + +     +LWK+IK GL+
Sbjct: 104 RINQRYSDKKASRKGSRVMSGGFASRLWKKIKEGLL 139

[Close]

BLAST of CaUC06G117670 vs. ExPASy TrEMBL
Match: A0A067K525 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11697 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-05
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 25  SNLYDSQEFKAMIGHLNKAIHS---NHNVLSNHLINSPFYRQRLNEIYKDSIGSTKRIMW 84
           S LYDS E +A+   LNKAI S   +   L ++L  SPFY QRL+ IYK++  + K+IM 
Sbjct: 44  STLYDSFELRAVTNQLNKAIQSLNCSSPTLMSYL-KSPFYGQRLDSIYKENAKTPKKIMG 103

Query: 85  YQTGTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 126
            Q       KR ++  G      L+ +LWK++K GL+    + D
Sbjct: 104 SQLARRSIDKRASRTAG----GGLMSRLWKKVKQGLLWSKQRND 142

[Close]

BLAST of CaUC06G117670 vs. ExPASy TrEMBL
Match: A0A5N6RQ74 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_019310 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-05
Identity = 40/106 (37.74%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 25  SNLYDSQEFKAMIGHLNKAIHSNHNVLS-----NHLINSPFYRQRLNEIYKDSIGSTKRI 84
           S LYDS E +AM   LNKAIH + NV S      HL NSP YR  L+ IY++S  + +RI
Sbjct: 35  STLYDSFELRAMTRQLNKAIHGS-NVSSPPPYIRHL-NSPLYRLGLDRIYRESTKTPRRI 94

Query: 85  MWYQTGTIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 126
               +      KR   +   +     V +LWK++K GL+    +K+
Sbjct: 95  SCSPSANAVVNKRMGMKHTRVDTGGFVTRLWKKVKQGLLRNKQRKE 138

[Close]

BLAST of CaUC06G117670 vs. ExPASy TrEMBL
Match: A0A2P5D6L7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_092670 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 25  SNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLIN--SPFYRQRLNEIYKDSIGSTKRIMWY 84
           S+LYDS E +A++  LNKAI  +      ++ N  SPFYR+RLN IY+++  S K +   
Sbjct: 46  SSLYDSYELQAVVHQLNKAIQGSKAFSPPYIYNLKSPFYRKRLNRIYRENRESPKTLTCS 105

Query: 85  QTGTIDTTKRTTKQRG--MISNVSLVGKLWKQIKVGL 118
              +  T    T  RG  M++   +V +LW+++K GL
Sbjct: 106 NLSSSTTLDDITSNRGAWMVTR-GVVTRLWEKVKRGL 141

The following BLAST results are available for this feature:

BLAST of CaUC06G117670 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53885.1	1.3e-42	79.66	hypothetical protein Csa_011823 [Cucumis sativus]	[more]
EEF47791.1	2.1e-05	35.42	conserved hypothetical protein [Ricinus communis]	[more]
KDP31321.1	2.7e-05	38.46	hypothetical protein JCGZ_11697 [Jatropha curcas]	[more]
KAF3968219.1	3.6e-05	39.05	hypothetical protein CMV_007858 [Castanea mollissima]	[more]
KAE8124422.1	6.1e-05	37.74	hypothetical protein FH972_019310 [Carpinus fangiana]	[more]

BLAST of CaUC06G117670 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G117670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW83	6.1e-43	79.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179690 PE=4 SV=1	[more]
B9RLR6	1.0e-05	35.42	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1470430 PE=4 SV=1	[more]
A0A067K525	1.3e-05	38.46	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11697 PE=4 SV=1	[more]
A0A5N6RQ74	2.9e-05	37.74	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_019310 PE=4 SV=1	[more]
A0A2P5D6L7	1.5e-04	37.11	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_092670 PE...	[more]

BLAST of CaUC06G117670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G117670.1	CaUC06G117670.1	mRNA