CaUC06G117280 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTTTTCCCGCGAAATTCGGGCAAAATCCCCGACGGCATCGCGTAACGCCAATGGCTTTGCACTACGACGCTACATTTCCAACTCACCGCTTCCCCAATTGGTTCTTCTCCGATCTGTCCTCCAAAATTAAGACACTTAAATCTCGGCCTCTTCAAACAACATATATCTTTAATCTTCTCTTTCGGCTGAAACAATCTCTGCCAAATTATCTCCGGTTTCCGATCCCTGAGGCCTCTGGCCTCCGACCTCCGACCTCCTACCTCCTCTTCTTTTGCTCCTTTCGAGGTCTCGAAATCTATAGAACTTTTGGCGGTGAAGAGGAGCGATGGGGATTCTTTATGGAATGGTCGCCAGAGGTCACGTTGTTTTGGCAGAGTTCAGCGCTACACAGACGAATGCGAGCGCGATTGCGAGGCAGATCATGGAGAAGATGAAGCAGGAAGACGATGATAGCAATGCTTCCTATTCTCATGATCGCTATATCTTTCATATCAAGAAGACTGATGGCCTTACCGTTCTTTGCATGGCCGACGAAGCCTCCGGAAGTAAGCCTTTTCTATGATTTTATCTCTCGAGTTTTTCTGCAAATCAAATCCAGCTAGCCGTCGAGGTACGGTTCTTAATAGAGATAATAATAGGTTTTCTTAGTGAGACTTGAGGACCGAAAATGCGTTATGACTTATGAGAATCTTTTTATGGTATTTTTTACAATGTTATGCTTTTGATAAGCGATTCTGAGTTCTATGAATCGATTTCTGTCCCTTAAAATTGCGAATGAGCTTTTGTAGCTTGGAGATTAGGTGAAAAATTATGATGATTTCGTTATTTTCCTCTTTCTGTTTGTCCAAACCATGTGGACGTGTAAGAACGATGGTGCTATTATCACGAGCGCAGTACGTTATTCTATCAGATTTTTAACCGAAATTTCGGACGTTCTCTGTTTGTGTTGTCATTTTCGGTTGACTGAATTTCAATGTTCTTGAGGACAGAAGAAACTGTTTGCTCGGACGGATTTGTTTTAAATCATTTATTGATTAACGGACTGTATAACCAATGCCTTCCACTTCACTCATTAGGCCATATAAATGTTGAGAAAGTAAAGAATTGTTCCGGTAATATGAATCTTTTTTCTCGCCCAGAATTTGATGGAGAATTGCAAGAAAAAAGTTAATTGACAAGATTTCGTAGGCTGCTTCTGCAAATTCTATTGAAAGCTTCTACGAGAAAGGGCATTTTCTGTTTGGTTTCTGTTTGATAGTTTAGTTCAATTTTACCAAATCATTATTCGCTCCAAACTTCAAACACTAAGCTTAACAACATTGAACAACTTTCTTGTAAACAGTATATGATGTATTACAATAACGTTGCTTTAGTTCTTGTTGGACTCTTGGAAAGTTTTCAGATCAAGGTTGATTGCTCTTAATTTGAGTCTATTTGTGTTGATTGGAAATTTTCTTTATCTGTTGCTACTGAAGCAGTCATTTTATACAGATAAGCTCTTCTCCAAGATTGTAGTTTCACTGCCAACTTGATCAGAGGGCTCCGTTCTCATTAACCGATGATAATGATGCTTTCTTCATTATTTGTGCAGGGAGAATTCCTTTTGCATTTCTTGAAGACATTCATCAAAGATTTGTGAAGACCTATGCTCGTACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCAAATGATCCAAATGCAGATAGGCTAAACCGTTTAAAAGGTGAAATGAGTCAGGCAAGTTCAGAAAATTATCTAATAAACTCTGTTTGTTCTAAGTAAATTGTTCATCCTATCGATCATTTGAAATAACGGTTGCTAGTGCTTTCCAAAATTTAGCCAATACTAGTAGTTGCTCTTTACTGTTTTCTACCGGTTCTTAACTATAGATTTAATCAGCTATATCATAGTACATAGAAGAAAGATTTCATGATAGATAAGAATATTCCTAATGATTCAAATGTGAATAGACTAAACTGTTGGGTAACTGAGTCTGACAAGTTCAGGAAATTTTTATTGAACTCAATGTGATCTAAGTTGTTCGTCTCATTGTCTTTTGAAACAATGGTTCTCTGTGCTTTCCAAACTCCAGCTAGTAACACTTACTGTTTGTTAACTTTGACTCTTAGCAATGAATTTAATTAGCATCAGAGCACATTAAAGAAATATTATGTTGTGGGCGGTTTTGATATATATTCTTCTCTTACAACTACTGTTAATCTATGCGAGATTGATACAGAATATTATATATTCAACCTTTCAGTTTCACCCCTCAGTATAGAATAAAAAGAGGCATATTATGGTTAAAACAACCGTCTTCAAAGAAAACTTGTTCACATTGAGTCAGTATTTGGTTTTACAATACTTCAATTATGCTGGAATAGAAATTCATCAAACATTGATATTTGACGCAGGTGAGGACTGTGATGATAGATAATATTGAGAAAGTGTTGGAGAGAGGTGACCGTTTGACTTTGCTGGTCGAGAAAACCACAAACATTCAAGGAAATGCAGTTCGATTTAGAAGGCAATCACGTCGTTACAGAAACACCTTGTGGTGGAGAAACTTTAAACTCACGTAAGCATCTTTGACAATATTCGTATATACATGGCTATTTCGGTTCACTCCATGCCACAAACCATGGTGTCTGCTTTCATGTTTTGCATTCAAACTGAAAAACTTATACAGAATCATGATACTAAGCTTTTTTAAGTTCGGTAATGTACCTCAAAATAGGTATGACCATTGTCAAACCATCCTAGAATTCAAAAACTTAAACTGATGATTGGTTAGCATAAATTTAATCTTCTTAGTATGTTCTCTAATCAACTATTGAAAAAGAGTTGGTCATCGATTTAGCTCAACTTGTAAACCAAAACTCATGTAATAAGAAGAAGTAACAGTATTTTGAGATTTTTATATCTATCCTTCCGGCCTACTATGATCCTCTGTTTTTATTGCTTATGGCCCCGAATGATTTATGTCTGTTACCACATAGCTACACCATAGAAGCCAATCGTAGCTTTAATATTATTTTGAACGTATTATAAAACAAGAAAAGAATCAGTGTGCGTTTTATCCTGCCTGCAGATGTTCGTTGTTGCTCATTTTCACAATCGTCCTCTATATTGTGCTAGCATTTTTCTGCAAAGGACCGCTGCTGCCATCCTGCTTGAATTGAGTGCGAATGCAGAAGATGCAGCTAAGTGA CTTTTTTTTCCCGCGAAATTCGGGCAAAATCCCCGACGGCATCGCGTAACGCCAATGGCTTTGCACTACGACGCTACATTTCCAACTCACCGCTTCCCCAATTGGTTCTTCTCCGATCTGTCCTCCAAAATTAAGACACTTAAATCTCGGCCTCTTCAAACAACATATATCTTTAATCTTCTCTTTCGGCTGAAACAATCTCTGCCAAATTATCTCCGGTTTCCGATCCCTGAGGCCTCTGGCCTCCGACCTCCGACCTCCTACCTCCTCTTCTTTTGCTCCTTTCGAGGTCTCGAAATCTATAGAACTTTTGGCGGTGAAGAGGAGCGATGGGGATTCTTTATGGAATGGTCGCCAGAGGTCACCGCTACACAGACGAATGCGAGCGCGATTGCGAGGCAGATCATGGAGAAGATGAAGCAGGAAGACGATGATAGCAATGCTTCCTATTCTCATGATCGCTATATCTTTCATATCAAGAAGACTGATGGCCTTACCGTTCTTTGCATGGCCGACGAAGCCTCCGGAAGGAGAATTCCTTTTGCATTTCTTGAAGACATTCATCAAAGATTTGTGAAGACCTATGCTCGTACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCAAATGATCCAAATGCAGATAGGCTAAACCGTTTAAAAGGTGAAATGAGTCAGGCAAGTTCAGAAAATTATCTAATAAACTCTAAGAAAGATTTCATGATAGATAAGAATATTCCTAATGATTCAAATGTGAATAGACTAAACTGTTGGGTAACTGAGTCTGACAAGTTCAGGAAATTTTTATTGAACTCAATTTGTTCGTCTCATTGTCTTTTGAAACAATGGTTCTCTGTGCTTTCCAAACTCCAGCTAGTAACACTTACTCATCAGAGCACATTAAAGAAATATTATGTTGTGGGCGGTTTTGATATATATTCTTCTCTTACAACTACTGTTAATCTATGCGAGATTGATACAGAATATTATATATTCAACCTTTCAAATAAAAAGAGGCATATTATGGTTAAAACAACCGTCTTCAAAGAAAACTTGTTCACATTGAGTCAGTATTTGGTTTTACAATACTTCAATTATGCTGGAATAGAAATTCATCAAACATTGATATTTGACGCAGATAATATTGAGAAAGTGTTGGAGAGAGGTGACCGTTTGACTTTGCTGGTCGAGAAAACCACAAACATTCAAGGAAATGCAGTTCGATTTAGAAGGCAATCACGTCGTTACAGAAACACCTTGTGGTGGAGAAACTTTAAACTCACAAAAGAATCAGTGTGCGTTTTATCCTGCCTGCAGATGTTCGTTGTTGCTCATTTTCACAATCGTCCTCTATATTGTGCTAGCATTTTTCTGCAAAGGACCGCTGCTGCCATCCTGCTTGAATTGAGTGCGAATGCAGAAGATGCAGCTAAGTGA CTTTTTTTTCCCGCGAAATTCGGGCAAAATCCCCGACGGCATCGCGTAACGCCAATGGCTTTGCACTACGACGCTACATTTCCAACTCACCGCTTCCCCAATTGGTTCTTCTCCGATCTGTCCTCCAAAATTAAGACACTTAAATCTCGGCCTCTTCAAACAACATATATCTTTAATCTTCTCTTTCGGCTGAAACAATCTCTGCCAAATTATCTCCGGTTTCCGATCCCTGAGGCCTCTGGCCTCCGACCTCCGACCTCCTACCTCCTCTTCTTTTGCTCCTTTCGAGGTCTCGAAATCTATAGAACTTTTGGCGGTGAAGAGGAGCGATGGGGATTCTTTATGGAATGGTCGCCAGAGGTCACCGCTACACAGACGAATGCGAGCGCGATTGCGAGGCAGATCATGGAGAAGATGAAGCAGGAAGACGATGATAGCAATGCTTCCTATTCTCATGATCGCTATATCTTTCATATCAAGAAGACTGATGGCCTTACCGTTCTTTGCATGGCCGACGAAGCCTCCGGAAGGAGAATTCCTTTTGCATTTCTTGAAGACATTCATCAAAGATTTGTGAAGACCTATGCTCGTACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCAAATGATCCAAATGCAGATAGGCTAAACCGTTTAAAAGGTGAAATGAGTCAGGCAAGTTCAGAAAATTATCTAATAAACTCTAAGAAAGATTTCATGATAGATAAGAATATTCCTAATGATTCAAATGTGAATAGACTAAACTGTTGGGTAACTGAGTCTGACAAGTTCAGGAAATTTTTATTGAACTCAATTTGTTCGTCTCATTGTCTTTTGAAACAATGGTTCTCTGTGCTTTCCAAACTCCAGCTAGTAACACTTACTCATCAGAGCACATTAAAGAAATATTATGTTGTGGGCGGTTTTGATATATATTCTTCTCTTACAACTACTGTTAATCTATGCGAGATTGATACAGAATATTATATATTCAACCTTTCAAATAAAAAGAGGCATATTATGGTTAAAACAACCGTCTTCAAAGAAAACTTGTTCACATTGAGTCAGTATTTGGTTTTACAATACTTCAATTATGCTGGAATAGAAATTCATCAAACATTGATATTTGACGCAGATAATATTGAGAAAGTGTTGGAGAGAGGTGACCGTTTGACTTTGCTGGTCGAGAAAACCACAAACATTCAAGGAAATGCAGTTCGATTTAGAAGGCAATCACGTCGTTACAGAAACACCTTGTGGTGGAGAAACTTTAAACTCACAAAAGAATCAGTGTGCGTTTTATCCTGCCTGCAGATGTTCGTTGTTGCTCATTTTCACAATCGTCCTCTATATTGTGCTAGCATTTTTCTGCAAAGGACCGCTGCTGCCATCCTGCTTGAATTGAGTGCGAATGCAGAAGATGCAGCTAAGTGA LFFPAKFGQNPRRHRVTPMALHYDATFPTHRFPNWFFSDLSSKIKTLKSRPLQTTYIFNLLFRLKQSLPNYLRFPIPEASGLRPPTSYLLFFCSFRGLEIYRTFGGEEERWGFFMEWSPEVTATQTNASAIARQIMEKMKQEDDDSNASYSHDRYIFHIKKTDGLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFSNDPNADRLNRLKGEMSQASSENYLINSKKDFMIDKNIPNDSNVNRLNCWVTESDKFRKFLLNSICSSHCLLKQWFSVLSKLQLVTLTHQSTLKKYYVVGGFDIYSSLTTTVNLCEIDTEYYIFNLSNKKRHIMVKTTVFKENLFTLSQYLVLQYFNYAGIEIHQTLIFDADNIEKVLERGDRLTLLVEKTTNIQGNAVRFRRQSRRYRNTLWWRNFKLTKESVCVLSCLQMFVVAHFHNRPLYCASIFLQRTAAAILLELSANAEDAAK Homology
BLAST of CaUC06G117280 vs. NCBI nr
Match: KAG7023495.1 (Vesicle-associated membrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 289.7 bits (740), Expect = 4.9e-74 Identity = 174/341 (51.03%), Postives = 187/341 (54.84%), Query Frame = 0
BLAST of CaUC06G117280 vs. NCBI nr
Match: XP_016899833.1 (PREDICTED: vesicle-associated membrane protein 711-like [Cucumis melo]) HSP 1 Score: 277.7 bits (709), Expect = 1.9e-70 Identity = 173/346 (50.00%), Postives = 182/346 (52.60%), Query Frame = 0
BLAST of CaUC06G117280 vs. NCBI nr
Match: XP_004150529.1 (vesicle-associated membrane protein 713 [Cucumis sativus] >KGN65117.1 hypothetical protein Csa_004548 [Cucumis sativus]) HSP 1 Score: 275.4 bits (703), Expect = 9.5e-70 Identity = 171/346 (49.42%), Postives = 182/346 (52.60%), Query Frame = 0
BLAST of CaUC06G117280 vs. NCBI nr
Match: KAG7021765.1 (Vesicle-associated membrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 272.3 bits (695), Expect = 8.1e-69 Identity = 168/348 (48.28%), Postives = 181/348 (52.01%), Query Frame = 0
BLAST of CaUC06G117280 vs. NCBI nr
Match: XP_022134688.1 (vesicle-associated membrane protein 711-like [Momordica charantia]) HSP 1 Score: 271.9 bits (694), Expect = 1.1e-68 Identity = 170/346 (49.13%), Postives = 179/346 (51.73%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy Swiss-Prot
Match: Q9LFP1 (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana OX=3702 GN=VAMP713 PE=1 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 7.9e-51 Identity = 128/345 (37.10%), Postives = 162/345 (46.96%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy Swiss-Prot
Match: O49377 (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana OX=3702 GN=VAMP711 PE=1 SV=2) HSP 1 Score: 198.7 bits (504), Expect = 1.5e-49 Identity = 127/345 (36.81%), Postives = 163/345 (47.25%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy Swiss-Prot
Match: Q9SIQ9 (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana OX=3702 GN=VAMP712 PE=2 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.0e-46 Identity = 120/330 (36.36%), Postives = 155/330 (46.97%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy Swiss-Prot
Match: Q9FMR5 (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana OX=3702 GN=VAMP714 PE=1 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-33 Identity = 67/124 (54.03%), Postives = 92/124 (74.19%), Query Frame = 0
HSP 2 Score: 65.1 bits (157), Expect = 2.6e-09 Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy Swiss-Prot
Match: Q86AQ7 (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum OX=44689 GN=vamp7B PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.9e-21 Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy TrEMBL
Match: A0A1S4DV36 (vesicle-associated membrane protein 711-like OS=Cucumis melo OX=3656 GN=LOC103487414 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 9.3e-71 Identity = 173/346 (50.00%), Postives = 182/346 (52.60%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy TrEMBL
Match: A0A0A0LWB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G226450 PE=3 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 4.6e-70 Identity = 171/346 (49.42%), Postives = 182/346 (52.60%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy TrEMBL
Match: A0A6J1C2Q2 (vesicle-associated membrane protein 711-like OS=Momordica charantia OX=3673 GN=LOC111006896 PE=3 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 5.1e-69 Identity = 170/346 (49.13%), Postives = 179/346 (51.73%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy TrEMBL
Match: A0A5D3C4W2 (Vesicle-associated membrane protein 711-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00620 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 1.5e-68 Identity = 175/346 (50.58%), Postives = 186/346 (53.76%), Query Frame = 0
BLAST of CaUC06G117280 vs. ExPASy TrEMBL
Match: A0A6J1H9Z9 (vesicle-associated membrane protein 711-like OS=Cucurbita moschata OX=3662 GN=LOC111461457 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 7.4e-68 Identity = 167/341 (48.97%), Postives = 178/341 (52.20%), Query Frame = 0
BLAST of CaUC06G117280 vs. TAIR 10
Match: AT5G11150.1 (vesicle-associated membrane protein 713 ) HSP 1 Score: 203.0 bits (515), Expect = 5.6e-52 Identity = 128/345 (37.10%), Postives = 162/345 (46.96%), Query Frame = 0
BLAST of CaUC06G117280 vs. TAIR 10
Match: AT4G32150.1 (vesicle-associated membrane protein 711 ) HSP 1 Score: 198.7 bits (504), Expect = 1.1e-50 Identity = 127/345 (36.81%), Postives = 163/345 (47.25%), Query Frame = 0
BLAST of CaUC06G117280 vs. TAIR 10
Match: AT2G25340.1 (vesicle-associated membrane protein 712 ) HSP 1 Score: 188.3 bits (477), Expect = 1.4e-47 Identity = 120/330 (36.36%), Postives = 155/330 (46.97%), Query Frame = 0
BLAST of CaUC06G117280 vs. TAIR 10
Match: AT5G22360.1 (vesicle-associated membrane protein 714 ) HSP 1 Score: 146.0 bits (367), Expect = 8.1e-35 Identity = 67/124 (54.03%), Postives = 92/124 (74.19%), Query Frame = 0
HSP 2 Score: 65.1 bits (157), Expect = 1.8e-10 Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of CaUC06G117280 vs. TAIR 10
Match: AT2G32670.1 (vesicle-associated membrane protein 725 ) HSP 1 Score: 54.3 bits (129), Expect = 3.2e-07 Identity = 51/216 (23.61%), Postives = 101/216 (46.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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