CaUC06G116180 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCATCATCATGCCCGTCGCTCCACGAGTCGGAGGATGAGCTGAAGCACATGCCGTTGGCACCCCCGCGGACGAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCGATGTGTGAGACACCAAGGGATCTTGCATGGGAGAAGAGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACGGATAGGGATGACTTGACCGATGAGGACTGGAATGAACTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGTTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCCAGCCCCGTGTCAACACCGCATAGCACCGCCTCGACATCGTCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGTATGAAGATATGGCTTTTTATAGGGACTAGTTTATTTGCAATATAATTACCACTTTTATTCAATAGAAGTTATTTTGACCCAATTTTTTATTCTTTACATTTTTTGGAAAATCAAACTTCTAAAAATGAAATATACTTATTTTTTTTAGTGTTCAAAACTTATCTTTGTTTTTTAAAATAGTTCTAAAAGTAAAAAAAAATAAAATAAAAAAATAAAAAAATAAATAGTATTTATAGTCTTAATTTAAAAAATTTAAATAGTTATCAATCCAACCTTCCATATTACTTTAGCTGTTATAATATTTTAGTCCTGTTAAGTTTCTTGAAATCATTGACATGAAAAATTTCATTAAACATCCAACACACATGACTTCATGTATGTATGCCTTTGCCAAATAAGATTATACTAAAATGATCTGAAGCCACATCATCCATCAGTTATCAAATTATTAGTAAGAACAAAATATTGTTTTCTAAAATTCAAGGAATAAATTAAATATCATTGAAAGTTGACTAAAATAAAATAAATCTAGAGATTTAGTCACAAAATGTGACAAATCTTTTTTTTTTTTTTGTCCTTTTCTAGAAAGCACACCCTATTACAAATGTTTTAGAAAATTAAGCTACCCATTTATTATTATTATTATTATTAATTTTTAATTTTTATTTCATTTGATGGATGTAGGGGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAA ATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCATCATCATGCCCGTCGCTCCACGAGTCGGAGGATGAGCTGAAGCACATGCCGTTGGCACCCCCGCGGACGAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCGATGTGTGAGACACCAAGGGATCTTGCATGGGAGAAGAGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACGGATAGGGATGACTTGACCGATGAGGACTGGAATGAACTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGTTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCCAGCCCCGTGTCAACACCGCATAGCACCGCCTCGACATCGTCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGGGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAA ATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCATCATCATGCCCGTCGCTCCACGAGTCGGAGGATGAGCTGAAGCACATGCCGTTGGCACCCCCGCGGACGAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCGATGTGTGAGACACCAAGGGATCTTGCATGGGAGAAGAGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACGGATAGGGATGACTTGACCGATGAGGACTGGAATGAACTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGTTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCCAGCCCCGTGTCAACACCGCATAGCACCGCCTCGACATCGTCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGGGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAA MDKKHLQRMPSSLSSSSSCPSLHESEDELKHMPLAPPRTKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSTASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVACSVMQSLGEK Homology
BLAST of CaUC06G116180 vs. NCBI nr
Match: XP_008462705.1 (PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo]) HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98 Identity = 184/191 (96.34%), Postives = 187/191 (97.91%), Query Frame = 0
BLAST of CaUC06G116180 vs. NCBI nr
Match: XP_038878789.1 (uncharacterized protein LOC120070939 [Benincasa hispida]) HSP 1 Score: 368.6 bits (945), Expect = 3.2e-98 Identity = 183/191 (95.81%), Postives = 185/191 (96.86%), Query Frame = 0
BLAST of CaUC06G116180 vs. NCBI nr
Match: XP_023533045.1 (uncharacterized protein LOC111795047 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 364.8 bits (935), Expect = 4.6e-97 Identity = 181/190 (95.26%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of CaUC06G116180 vs. NCBI nr
Match: XP_022960867.1 (uncharacterized protein LOC111461542 [Cucurbita moschata]) HSP 1 Score: 360.5 bits (924), Expect = 8.7e-96 Identity = 179/190 (94.21%), Postives = 183/190 (96.32%), Query Frame = 0
BLAST of CaUC06G116180 vs. NCBI nr
Match: XP_022987465.1 (uncharacterized protein LOC111485003 [Cucurbita maxima]) HSP 1 Score: 359.0 bits (920), Expect = 2.5e-95 Identity = 179/190 (94.21%), Postives = 182/190 (95.79%), Query Frame = 0
BLAST of CaUC06G116180 vs. ExPASy TrEMBL
Match: A0A1S3CHL5 (uncharacterized protein LOC103501007 OS=Cucumis melo OX=3656 GN=LOC103501007 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.3e-99 Identity = 184/191 (96.34%), Postives = 187/191 (97.91%), Query Frame = 0
BLAST of CaUC06G116180 vs. ExPASy TrEMBL
Match: A0A6J1H8L6 (uncharacterized protein LOC111461542 OS=Cucurbita moschata OX=3662 GN=LOC111461542 PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 4.2e-96 Identity = 179/190 (94.21%), Postives = 183/190 (96.32%), Query Frame = 0
BLAST of CaUC06G116180 vs. ExPASy TrEMBL
Match: A0A6J1JGY3 (uncharacterized protein LOC111485003 OS=Cucurbita maxima OX=3661 GN=LOC111485003 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95 Identity = 179/190 (94.21%), Postives = 182/190 (95.79%), Query Frame = 0
BLAST of CaUC06G116180 vs. ExPASy TrEMBL
Match: A0A0A0LY38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690230 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 2.7e-95 Identity = 181/192 (94.27%), Postives = 186/192 (96.88%), Query Frame = 0
BLAST of CaUC06G116180 vs. ExPASy TrEMBL
Match: A0A5A7V807 (Ankyrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00220 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 4.0e-94 Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 0
BLAST of CaUC06G116180 vs. TAIR 10
Match: AT1G08790.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 199.9 bits (507), Expect = 1.8e-51 Identity = 120/188 (63.83%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of CaUC06G116180 vs. TAIR 10
Match: AT5G28690.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 179.9 bits (455), Expect = 2.0e-45 Identity = 111/187 (59.36%), Postives = 131/187 (70.05%), Query Frame = 0
BLAST of CaUC06G116180 vs. TAIR 10
Match: AT3G04700.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 171.8 bits (434), Expect = 5.4e-43 Identity = 95/159 (59.75%), Postives = 118/159 (74.21%), Query Frame = 0
BLAST of CaUC06G116180 vs. TAIR 10
Match: AT3G04710.3 (ankyrin repeat family protein ) HSP 1 Score: 166.0 bits (419), Expect = 2.9e-41 Identity = 91/156 (58.33%), Postives = 115/156 (73.72%), Query Frame = 0
BLAST of CaUC06G116180 vs. TAIR 10
Match: AT2G43340.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 96.7 bits (239), Expect = 2.2e-20 Identity = 63/173 (36.42%), Postives = 96/173 (55.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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