CaUC06G115010 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G115010
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Bark storage protein A
Location	Ciama_Chr06: 11664622 .. 11664870 (+)
RNA-Seq Expression	CaUC06G115010
Synteny	CaUC06G115010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGCATTTGATATTGGTGATATTGGTATTGGAGATCAGCCTCATGACCCATGCAGCTGTTCCTTTGAGTGTTTTGAAACACATTGTTATAGTTAACAAAAATGGTCCTTATTTGGGCATAGTGGTGCCTAATGCCTTTGAAATGAACCCTCTTCTTCAATCTCCAAACTTTGTGGTTGATCACAATCTTCCACACTTAGATTTTTCAGGTTTGCCAAATCATCATCTGTATGTTTTTGTGTAA

mRNA sequence

ATGGAGAGGCATTTGATATTGGTGATATTGGTATTGGAGATCAGCCTCATGACCCATGCAGCTGTTCCTTTGAGTGTTTTGAAACACATTGTTATAGTTAACAAAAATGGTCCTTATTTGGGCATAGTGGTGCCTAATGCCTTTGAAATGAACCCTCTTCTTCAATCTCCAAACTTTGTGGTTGATCACAATCTTCCACACTTAGATTTTTCAGGTTTGCCAAATCATCATCTGTATGTTTTTGTGTAA

Coding sequence (CDS)

ATGGAGAGGCATTTGATATTGGTGATATTGGTATTGGAGATCAGCCTCATGACCCATGCAGCTGTTCCTTTGAGTGTTTTGAAACACATTGTTATAGTTAACAAAAATGGTCCTTATTTGGGCATAGTGGTGCCTAATGCCTTTGAAATGAACCCTCTTCTTCAATCTCCAAACTTTGTGGTTGATCACAATCTTCCACACTTAGATTTTTCAGGTTTGCCAAATCATCATCTGTATGTTTTTGTGTAA

Protein sequence

MERHLILVILVLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSGLPNHHLYVFV

Homology

[Close]

BLAST of CaUC06G115010 vs. NCBI nr
Match: XP_011660294.1 (bark storage protein A [Cucumis sativus] >KGN66819.1 hypothetical protein Csa_007555 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.0e-21
Identity = 61/77 (79.22%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MERHLILVIL-----VLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
          ME  LILVIL     VLEISLMTHAAVP S++KHI  VNKNGPYLGIVVPNAFEMNPLLQ
Sbjct: 1  MESRLILVILSVVVMVLEISLMTHAAVPKSIMKHIDRVNKNGPYLGIVVPNAFEMNPLLQ 60

Query: 61 SPNFVVDHNLPHLDFSG 73
          SP+ + DHNLPHLDFSG
Sbjct: 61 SPSLMADHNLPHLDFSG 77

[Close]

BLAST of CaUC06G115010 vs. NCBI nr
Match: XP_038880578.1 (bark storage protein A-like [Benincasa hispida])

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-21
Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 1  MERHLI-----LVILVLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
          ME HLI     +V++VLEISLMTHAAVP+ ++K I  VNKNGPYLGIVVPNAFEM PLLQ
Sbjct: 1  MESHLIWVILSVVVMVLEISLMTHAAVPMGIMKQIDRVNKNGPYLGIVVPNAFEMKPLLQ 60

Query: 61 SPNFVVDHNLPHLDFSG 73
          SP+F+VDHNLPHLDFSG
Sbjct: 61 SPSFMVDHNLPHLDFSG 77

[Close]

BLAST of CaUC06G115010 vs. NCBI nr
Match: TYK29698.1 (bark storage protein A [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 5.7e-20
Identity = 57/77 (74.03%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MERHLILVIL-----VLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
          ME HLILVIL     + EISLMTHAAVP +++KHI  VNKNGPYLGIVVPNAFEM+PLLQ
Sbjct: 1  MESHLILVILSVAVMISEISLMTHAAVPKTIMKHIGRVNKNGPYLGIVVPNAFEMDPLLQ 60

Query: 61 SPNFVVDHNLPHLDFSG 73
          SP+ VVDH+LP+ DFSG
Sbjct: 61 SPSLVVDHDLPYFDFSG 77

[Close]

BLAST of CaUC06G115010 vs. NCBI nr
Match: KAG6589927.1 (Bark storage protein A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023596.1 Bark storage protein A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19
Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 1  MERHLIL---VILVLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQSP 60
          MER ++L   VI+VLEISLM HAAVP +VLK I +VNKNGPYLGIVVPNAFEMNPLLQSP
Sbjct: 1  MERPMMLVGVVIMVLEISLMAHAAVPATVLKQIDMVNKNGPYLGIVVPNAFEMNPLLQSP 60

Query: 61 NFVVDHNLPHLDFSG 73
          + VVD  LPHLDFSG
Sbjct: 61 SLVVDPTLPHLDFSG 75

[Close]

BLAST of CaUC06G115010 vs. NCBI nr
Match: XP_008462741.1 (PREDICTED: bark storage protein A [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 2.8e-19
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MERHLILVIL-----VLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
          ME HLILVIL     + EISLMTHAAVP +++KHI  VNKNGPYLGIVVPNAFEM+PLLQ
Sbjct: 1  MESHLILVILSVAVMISEISLMTHAAVPKTIMKHIGRVNKNGPYLGIVVPNAFEMDPLLQ 60

Query: 61 SPNFVVDHNLPHLDFSG 73
          SP+ VVDH+LP+ DF G
Sbjct: 61 SPSLVVDHDLPYFDFLG 77

[Close]

BLAST of CaUC06G115010 vs. ExPASy TrEMBL
Match: A0A0A0M0L4 (PNP_UDP_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G696520 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.1e-22
Identity = 61/77 (79.22%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MERHLILVIL-----VLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
          ME  LILVIL     VLEISLMTHAAVP S++KHI  VNKNGPYLGIVVPNAFEMNPLLQ
Sbjct: 1  MESRLILVILSVVVMVLEISLMTHAAVPKSIMKHIDRVNKNGPYLGIVVPNAFEMNPLLQ 60

Query: 61 SPNFVVDHNLPHLDFSG 73
          SP+ + DHNLPHLDFSG
Sbjct: 61 SPSLMADHNLPHLDFSG 77

[Close]

BLAST of CaUC06G115010 vs. ExPASy TrEMBL
Match: A0A5D3E1P1 (Bark storage protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3607G00050 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.8e-20
Identity = 57/77 (74.03%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MERHLILVIL-----VLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
          ME HLILVIL     + EISLMTHAAVP +++KHI  VNKNGPYLGIVVPNAFEM+PLLQ
Sbjct: 1  MESHLILVILSVAVMISEISLMTHAAVPKTIMKHIGRVNKNGPYLGIVVPNAFEMDPLLQ 60

Query: 61 SPNFVVDHNLPHLDFSG 73
          SP+ VVDH+LP+ DFSG
Sbjct: 61 SPSLVVDHDLPYFDFSG 77

[Close]

BLAST of CaUC06G115010 vs. ExPASy TrEMBL
Match: A0A1S3CI60 (bark storage protein A OS=Cucumis melo OX=3656 GN=LOC103501030 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MERHLILVIL-----VLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
          ME HLILVIL     + EISLMTHAAVP +++KHI  VNKNGPYLGIVVPNAFEM+PLLQ
Sbjct: 1  MESHLILVILSVAVMISEISLMTHAAVPKTIMKHIGRVNKNGPYLGIVVPNAFEMDPLLQ 60

Query: 61 SPNFVVDHNLPHLDFSG 73
          SP+ VVDH+LP+ DF G
Sbjct: 61 SPSLVVDHDLPYFDFLG 77

[Close]

BLAST of CaUC06G115010 vs. ExPASy TrEMBL
Match: A0A6J1JJT3 (bark storage protein A OS=Cucurbita maxima OX=3661 GN=LOC111485222 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 7  LVILVLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLP 66
          +VI+VLEISLM HAAVP +VLK I +VNKNGPYLGIVVPNAFEMNPLLQSP  VVD  LP
Sbjct: 10 VVIMVLEISLMAHAAVPATVLKQIDMVNKNGPYLGIVVPNAFEMNPLLQSPTLVVDPTLP 69

Query: 67 HLDFSG 73
          HLDFSG
Sbjct: 70 HLDFSG 75

[Close]

BLAST of CaUC06G115010 vs. ExPASy TrEMBL
Match: A0A6J1HA24 (bark storage protein A OS=Cucurbita moschata OX=3662 GN=LOC111461849 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-19
Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 7  LVILVLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLP 66
          +VI++LEISLM HAAVP +VLK I +VNKNGPYLGIVVPNAFEMNPLLQSP+ VVD  LP
Sbjct: 10 VVIMLLEISLMAHAAVPATVLKQIDMVNKNGPYLGIVVPNAFEMNPLLQSPSLVVDPTLP 69

Query: 67 HLDFSG 73
          HLDFSG
Sbjct: 70 HLDFSG 75

[Close]

BLAST of CaUC06G115010 vs. TAIR 10
Match: AT4G28940.1 (Phosphorylase superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 3.5e-07
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 5  LILVILVLEISLMTHAAVPLSVLKHIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHN 64
          L++V+ V  +    +  +P + L+ I  +N+ GPYLGIV PN +E+NPLL S  +    +
Sbjct: 9  LVVVLSVGNVIEEANGEIPRTTLEKIERMNQKGPYLGIVAPNNYELNPLLGSKAYFPSSS 68

Query: 65 LPHLDFSG 73
          LP +DF+G
Sbjct: 69 LPFIDFAG 76

The following BLAST results are available for this feature:

BLAST of CaUC06G115010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660294.1	1.0e-21	79.22	bark storage protein A [Cucumis sativus] >KGN66819.1 hypothetical protein Csa_00...	[more]
XP_038880578.1	1.8e-21	75.32	bark storage protein A-like [Benincasa hispida]	[more]
TYK29698.1	5.7e-20	74.03	bark storage protein A [Cucumis melo var. makuwa]	[more]
KAG6589927.1	1.3e-19	77.33	Bark storage protein A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023...	[more]
XP_008462741.1	2.8e-19	72.73	PREDICTED: bark storage protein A [Cucumis melo]	[more]

BLAST of CaUC06G115010 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G115010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0L4	5.1e-22	79.22	PNP_UDP_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G696520 P...	[more]
A0A5D3E1P1	2.8e-20	74.03	Bark storage protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A1S3CI60	1.4e-19	72.73	bark storage protein A OS=Cucumis melo OX=3656 GN=LOC103501030 PE=4 SV=1	[more]
A0A6J1JJT3	1.8e-19	81.82	bark storage protein A OS=Cucurbita maxima OX=3661 GN=LOC111485222 PE=4 SV=1	[more]
A0A6J1HA24	3.1e-19	80.30	bark storage protein A OS=Cucurbita moschata OX=3662 GN=LOC111461849 PE=4 SV=1	[more]

BLAST of CaUC06G115010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28940.1	3.5e-07	39.71	Phosphorylase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21234:SF42	PHOSPHORYLASE SUPERFAMILY PROTEIN	coord: 4..72
None	No IPR available	PANTHER	PTHR21234	PURINE NUCLEOSIDE PHOSPHORYLASE	coord: 4..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G115010.1	CaUC06G115010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009116	nucleoside metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003824	catalytic activity