CaUC06G114380 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G114380
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Integrase catalytic domain-containing protein
Location	Ciama_Chr06: 9900442 .. 9901442 (+)
RNA-Seq Expression	CaUC06G114380
Synteny	CaUC06G114380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGTATCTTGTACCTGAACCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGACAAAGATGGGCTGTCAAGAACGTAGAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGTGGAACGCATTAGCTGTCCGCTCTCCGGTTGGGCAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTAGTTAGAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTA

mRNA sequence

ATGATATTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTAAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTA

Coding sequence (CDS)

ATGATATTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTAAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTA

Protein sequence

MILVRSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGV

Homology

[Close]

BLAST of CaUC06G114380 vs. NCBI nr
Match: KAD3640919.1 (hypothetical protein E3N88_30142 [Mikania micrantha])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 162/202 (80.20%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 3   LVRSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMD 62
           LVRSSMDRTWTVVGVGGS RVP SGIPGEEDQVGPCEQLDALSPFNPLSE+RQKEGKSMD
Sbjct: 51  LVRSSMDRTWTVVGVGGSPRVPLSGIPGEEDQVGPCEQLDALSPFNPLSEIRQKEGKSMD 110

Query: 63  RPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPC 122
           RPH LHPVGTTR PQGRLR             PG+               G LRGGGLPC
Sbjct: 111 RPHHLHPVGTTRLPQGRLRH------------PGN-------------QSGDLRGGGLPC 170

Query: 123 GGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVK 182
           GGCQRFESAYLQLVNLADTKLYDST FFRFG SIYDLSFMDVDKI PFSSTLGWHSLK+K
Sbjct: 171 GGCQRFESAYLQLVNLADTKLYDSTQFFRFGGSIYDLSFMDVDKIHPFSSTLGWHSLKMK 227

Query: 183 GEVQTKKGLRWIPRHPETRKGV 205
           GEVQT+KGLRWIPRHPETRKGV
Sbjct: 231 GEVQTRKGLRWIPRHPETRKGV 227

[Close]

BLAST of CaUC06G114380 vs. NCBI nr
Match: OVA05688.1 (hypothetical protein BVC80_4285g1 [Macleaya cordata])

HSP 1 Score: 305.1 bits (780), Expect = 4.7e-79
Identity = 160/197 (81.22%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 14  VVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTT 73
           VVGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTT
Sbjct: 258 VVGVGGSPRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTT 317

Query: 74  RSPQGRLR-PKRRAEKGGKLSVPGSPVAGFSGTTRILK-----SVGGLRGGGLPCGGCQR 133
           RSPQGRLR P   + +  +     S  A F    R+       S GGLRGGGLPCGGCQR
Sbjct: 318 RSPQGRLRHPGLDSPEPQESLEWDSNSAPFEILRRVALWRAQISRGGLRGGGLPCGGCQR 377

Query: 134 FESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQT 193
           FESAYLQLVNLADTK+YDST FFRFGSSIYDLSFMDVDKIL FSSTLGWHSLKV GEVQT
Sbjct: 378 FESAYLQLVNLADTKVYDSTQFFRFGSSIYDLSFMDVDKILLFSSTLGWHSLKVNGEVQT 437

Query: 194 KKGLRWIPRHPETRKGV 205
           +KGLRWIPRHPETRKGV
Sbjct: 438 RKGLRWIPRHPETRKGV 454

[Close]

BLAST of CaUC06G114380 vs. NCBI nr
Match: KAG7528872.1 (hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica] >KAG7528886.1 hypothetical protein ISN44_Un153g000180 [Arabidopsis suecica] >KAG7529053.1 hypothetical protein ISN45_Un101g000060 [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7529068.1 hypothetical protein ISN45_Un101g000220 [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 289.3 bits (739), Expect = 2.6e-74
Identity = 146/180 (81.11%), Postives = 155/180 (86.11%), Query Frame = 0


Query: 28  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRP---KR 87
           IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR    + 
Sbjct: 46  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRVALWRA 105

Query: 88  RAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLY 147
           + ++  KL   GS     +    +++SV GL GGGLPCGGCQRFESAYLQLVNLADTKLY
Sbjct: 106 QYDESCKLCSGGSSCLSLAS---MVESVRGLIGGGLPCGGCQRFESAYLQLVNLADTKLY 165

Query: 148 DSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGV 205
           DST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGV
Sbjct: 166 DSTQFFRFGSSIYDFSFMDVDKIFPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGV 222

[Close]

BLAST of CaUC06G114380 vs. NCBI nr
Match: CAD5336145.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-73
Identity = 146/189 (77.25%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 28  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRP----- 87
           IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR      
Sbjct: 132 IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRSSPFEI 191

Query: 88  -------KRRAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPCGGCQRFESAYLQL 147
                  + + ++  KL   GS     +    +++SV GL GGGLPCGGCQRFESAYLQL
Sbjct: 192 LRRVALWRAQYDESCKLCSGGSSCLSLAS---MVESVRGLIGGGLPCGGCQRFESAYLQL 251

Query: 148 VNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIP 205
           VNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIP
Sbjct: 252 VNLADTKLYDSTQFFRFGSSIYDFSFMDVDKIFPFSSTLGWHSLKVKGEVQTRKGLRWIP 311

[Close]

BLAST of CaUC06G114380 vs. NCBI nr
Match: CAD5336141.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-73
Identity = 146/189 (77.25%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 28  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRP----- 87
           IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR      
Sbjct: 46  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRSSPFEI 105

Query: 88  -------KRRAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPCGGCQRFESAYLQL 147
                  + + ++  KL   GS     +    +++SV GL GGGLPCGGCQRFESAYLQL
Sbjct: 106 LRRVALWRAQYDESCKLCSGGSSCLSLAS---MVESVRGLIGGGLPCGGCQRFESAYLQL 165

Query: 148 VNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIP 205
           VNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIP
Sbjct: 166 VNLADTKLYDSTQFFRFGSSIYDFSFMDVDKIFPFSSTLGWHSLKVKGEVQTRKGLRWIP 225

[Close]

BLAST of CaUC06G114380 vs. ExPASy TrEMBL
Match: A0A5N6MLP8 (Uncharacterized protein ycf68 OS=Mikania micrantha OX=192012 GN=E3N88_30142 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.7e-83
Identity = 162/202 (80.20%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 3   LVRSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMD 62
           LVRSSMDRTWTVVGVGGS RVP SGIPGEEDQVGPCEQLDALSPFNPLSE+RQKEGKSMD
Sbjct: 51  LVRSSMDRTWTVVGVGGSPRVPLSGIPGEEDQVGPCEQLDALSPFNPLSEIRQKEGKSMD 110

Query: 63  RPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPC 122
           RPH LHPVGTTR PQGRLR             PG+               G LRGGGLPC
Sbjct: 111 RPHHLHPVGTTRLPQGRLRH------------PGN-------------QSGDLRGGGLPC 170

Query: 123 GGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVK 182
           GGCQRFESAYLQLVNLADTKLYDST FFRFG SIYDLSFMDVDKI PFSSTLGWHSLK+K
Sbjct: 171 GGCQRFESAYLQLVNLADTKLYDSTQFFRFGGSIYDLSFMDVDKIHPFSSTLGWHSLKMK 227

Query: 183 GEVQTKKGLRWIPRHPETRKGV 205
           GEVQT+KGLRWIPRHPETRKGV
Sbjct: 231 GEVQTRKGLRWIPRHPETRKGV 227

[Close]

BLAST of CaUC06G114380 vs. ExPASy TrEMBL
Match: A0A200Q5G5 (Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.3e-79
Identity = 160/197 (81.22%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 14  VVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTT 73
           VVGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTT
Sbjct: 258 VVGVGGSPRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTT 317

Query: 74  RSPQGRLR-PKRRAEKGGKLSVPGSPVAGFSGTTRILK-----SVGGLRGGGLPCGGCQR 133
           RSPQGRLR P   + +  +     S  A F    R+       S GGLRGGGLPCGGCQR
Sbjct: 318 RSPQGRLRHPGLDSPEPQESLEWDSNSAPFEILRRVALWRAQISRGGLRGGGLPCGGCQR 377

Query: 134 FESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQT 193
           FESAYLQLVNLADTK+YDST FFRFGSSIYDLSFMDVDKIL FSSTLGWHSLKV GEVQT
Sbjct: 378 FESAYLQLVNLADTKVYDSTQFFRFGSSIYDLSFMDVDKILLFSSTLGWHSLKVNGEVQT 437

Query: 194 KKGLRWIPRHPETRKGV 205
           +KGLRWIPRHPETRKGV
Sbjct: 438 RKGLRWIPRHPETRKGV 454

[Close]

BLAST of CaUC06G114380 vs. ExPASy TrEMBL
Match: A0A7G2FKR6 (Uncharacterized protein ycf68 OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23352 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 146/189 (77.25%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 28  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRP----- 87
           IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR      
Sbjct: 46  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRSSPFEI 105

Query: 88  -------KRRAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPCGGCQRFESAYLQL 147
                  + + ++  KL   GS     +    +++SV GL GGGLPCGGCQRFESAYLQL
Sbjct: 106 LRRVALWRAQYDESCKLCSGGSSCLSLAS---MVESVRGLIGGGLPCGGCQRFESAYLQL 165

Query: 148 VNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIP 205
           VNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIP
Sbjct: 166 VNLADTKLYDSTQFFRFGSSIYDFSFMDVDKIFPFSSTLGWHSLKVKGEVQTRKGLRWIP 225

[Close]

BLAST of CaUC06G114380 vs. ExPASy TrEMBL
Match: A0A7G2FMH4 (Uncharacterized protein ycf68 OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23357 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 146/189 (77.25%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 28  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRP----- 87
           IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR      
Sbjct: 132 IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRSSPFEI 191

Query: 88  -------KRRAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPCGGCQRFESAYLQL 147
                  + + ++  KL   GS     +    +++SV GL GGGLPCGGCQRFESAYLQL
Sbjct: 192 LRRVALWRAQYDESCKLCSGGSSCLSLAS---MVESVRGLIGGGLPCGGCQRFESAYLQL 251

Query: 148 VNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIP 205
           VNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIP
Sbjct: 252 VNLADTKLYDSTQFFRFGSSIYDFSFMDVDKIFPFSSTLGWHSLKVKGEVQTRKGLRWIP 311

[Close]

BLAST of CaUC06G114380 vs. ExPASy TrEMBL
Match: A0A7G2FJL3 (Uncharacterized protein ycf68 OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23353 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 146/189 (77.25%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 28  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRP----- 87
           IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR      
Sbjct: 46  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRSSPFEI 105

Query: 88  -------KRRAEKGGKLSVPGSPVAGFSGTTRILKSVGGLRGGGLPCGGCQRFESAYLQL 147
                  + + ++  KL   GS     +    +++SV GL GGGLPCGGCQRFESAYLQL
Sbjct: 106 LRRVALWRAQYDESCKLCSGGSSCLSLAS---MVESVRGLIGGGLPCGGCQRFESAYLQL 165

Query: 148 VNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIP 205
           VNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIP
Sbjct: 166 VNLADTKLYDSTQFFRFGSSIYDFSFMDVDKIFPFSSTLGWHSLKVKGEVQTRKGLRWIP 225

The following BLAST results are available for this feature:

BLAST of CaUC06G114380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAD3640919.1	1.2e-82	80.20	hypothetical protein E3N88_30142 [Mikania micrantha]	[more]
OVA05688.1	4.7e-79	81.22	hypothetical protein BVC80_4285g1 [Macleaya cordata]	[more]
KAG7528872.1	2.6e-74	81.11	hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica] >KAG7528886.1 hypo...	[more]
CAD5336145.1	2.2e-73	77.25	unnamed protein product [Arabidopsis thaliana]	[more]
CAD5336141.1	2.2e-73	77.25	unnamed protein product [Arabidopsis thaliana]	[more]

BLAST of CaUC06G114380 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G114380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N6MLP8	5.7e-83	80.20	Uncharacterized protein ycf68 OS=Mikania micrantha OX=192012 GN=E3N88_30142 PE=3...	[more]
A0A200Q5G5	2.3e-79	81.22	Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 ...	[more]
A0A7G2FKR6	1.1e-73	77.25	Uncharacterized protein ycf68 OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS233...	[more]
A0A7G2FMH4	1.1e-73	77.25	Uncharacterized protein ycf68 OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS233...	[more]
A0A7G2FJL3	1.1e-73	77.25	Uncharacterized protein ycf68 OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS233...	[more]

BLAST of CaUC06G114380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..69
None	No IPR available	PANTHER	PTHR34890:SF13	YCF68 PROTEIN	coord: 110..192
IPR022546	Uncharacterised protein family Ycf68	PANTHER	PTHR34890	FAMILY NOT NAMED	coord: 110..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G114380.1	CaUC06G114380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003676	nucleic acid binding