CaUC06G114370 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G114370
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr06: 9898036 .. 9900204 (+)
RNA-Seq Expression	CaUC06G114370
Synteny	CaUC06G114370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCAACCGTTGAGGTTGGAACCCTGAGCAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGTAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATTCGTTCCCGGGCCTTGTACACACCGCCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAATGCTTGTTGGGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGTTAAACTTGGAGATGGAAGTCTTCTTTCGTTTCTCGACGGTGAAGTAAGACTAAGCTCATGAGCTTATTATCCTAGGTCGGAACAAGTTGATAGGATCCCCTTTTTTACGTCCCCGTGTCCCTCCCGTGTGGCGACATGGGGGCGAAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGCTTTTGGCATAGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTTGAACCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGA

mRNA sequence

ATGACGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGA

Coding sequence (CDS)

ATGACGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGA

Protein sequence

MTRAPSGRPARRAISSVVERAPDNCVVVPGLHMDSSMCSSAPDPEMWIIQGTLAWRTSPIQLSIHSWDPGGPGGTTSAPLFSRIHTSLISIWTAISRAQVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY

Homology

[Close]

BLAST of CaUC06G114370 vs. NCBI nr
Match: KAF4348549.1 (hypothetical protein F8388_000228 [Cannabis sativa])

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-40
Identity = 106/192 (55.21%), Postives = 113/192 (58.85%), Query Frame = 0


Query: 33  MDSSMCSSAPDPEMWIIQGTLAWRTSPIQLSIHSWDPGGPGGTTSAPLFSRIHTSLISIW 92
           MDSSMCSSAPDPEMWIIQGTLAWRTSP+                                
Sbjct: 1   MDSSMCSSAPDPEMWIIQGTLAWRTSPV-------------------------------- 60

Query: 93  TAISRAQVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFF--FMLFPEGPGD 152
               R  VRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEP F  F    +  G 
Sbjct: 61  ----RTGVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPLFSCFSRRDQEIGS 120

Query: 153 LKKD----LRVSRVG--PGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCML 212
            +K     +  S +G  P   L A     +G ISQ+LAMV KKGGTSTLGERSTTESCML
Sbjct: 121 SRKKNAWLINNSLLGLRPPQSLRAPPISAMGFISQKLAMVGKKGGTSTLGERSTTESCML 156

Query: 213 RSGRMNRSRKGI 217
                   RK I
Sbjct: 181 LQDGPAAPRKRI 156

[Close]

BLAST of CaUC06G114370 vs. NCBI nr
Match: KAG9438629.1 (hypothetical protein H6P81_021434 [Aristolochia fimbriata])

HSP 1 Score: 171.8 bits (434), Expect = 6.5e-39
Identity = 101/173 (58.38%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 20  RAPDNCVVVPGLHMDSSMCSSAPDPEMWIIQGTLAWRTSPIQLSIHS-WDPG-----GPG 79
           RA D   VV   HMDSSMCSSAPDPEMWIIQGT+AWRT P++  + S  DP      G G
Sbjct: 50  RASDWSEVVTS-HMDSSMCSSAPDPEMWIIQGTVAWRTPPVRTEVRSNVDPTFYSLVGSG 109

Query: 80  GTTSAP--LFSRIHTSLISIWTAIS-RAQVRPQWENKTEHLTTYLHRPRTTRSPLSFWGD 139
            +   P  L SR     +S++  +S   + R     K EHLTT+LHRPRTTRSPLSFWGD
Sbjct: 110 RSGGPPWLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGD 169

Query: 140 GGIVPFEPFFFML--FPEGPGD-----------LKKDLRVSRVGPGGFLNAFF 171
           GGIVPFEPFFF    FPEGPG            LKKDLRVSRVGPGG LNAFF
Sbjct: 170 GGIVPFEPFFFFFHAFPEGPGQEIDLAIRRMLGLKKDLRVSRVGPGGSLNAFF 221

[Close]

BLAST of CaUC06G114370 vs. NCBI nr
Match: KAA0050839.1 (putative chloroplast RF68 [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-38
Identity = 100/176 (56.82%), Postives = 115/176 (65.34%), Query Frame = 0


Query: 32  HMDSSMCSSAPDPEMWIIQGTLAWRTSPIQLSIHSWDPGGPGGT--TSAPLFSRIHTSLI 91
           HMD SMCSSAP+ EM  I   +  R S +  + +S    G  G     + L    +    
Sbjct: 43  HMDGSMCSSAPNLEM--IDEAIQVR-SNVDPTFYSLVGSGRSGRDHLGSSLLENPYIPYQ 102

Query: 92  SIWTAISRAQV-RPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGP 151
            + + +S   + RPQWENK EHLTTYLHRPRTTRSP+SFWGDGGI             GP
Sbjct: 103 YMDSYLSSIGLGRPQWENKIEHLTTYLHRPRTTRSPISFWGDGGI-------------GP 162

Query: 152 GDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCML 205
            DLKKDLRVS+VGPGGFLNAFFFLLIGVISQ LAMVRKKGGTSTLG  ST +SC +
Sbjct: 163 EDLKKDLRVSKVGPGGFLNAFFFLLIGVISQTLAMVRKKGGTSTLGVCSTMKSCAM 202

[Close]

BLAST of CaUC06G114370 vs. NCBI nr
Match: TYK08512.1 (putative chloroplast RF68 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-36
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 101 RPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRV 160
           RPQWENKTEHLTTYLHRPRTTRSP+SFWGDGGI             GP DLKKDLRVS+V
Sbjct: 107 RPQWENKTEHLTTYLHRPRTTRSPISFWGDGGI-------------GPEDLKKDLRVSKV 166

Query: 161 GPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCML 205
           GPGGFLNAFFFLLIGVISQ+LAMVRKKGGTSTLG  ST +SC +
Sbjct: 167 GPGGFLNAFFFLLIGVISQKLAMVRKKGGTSTLGVCSTMKSCAM 197

[Close]

BLAST of CaUC06G114370 vs. NCBI nr
Match: RWR97783.1 (hypothetical protein CKAN_02723900 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-36
Identity = 84/123 (68.29%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 33  MDSSMCSSAPDPEMWIIQGTLAWRTSP----IQLSIHSWDPGGPGGTTSAPLFSRIHTSL 92
           MDSSMCSSAPDP MWIIQGTLAWRT P    IQLSIHSWDPGGPGG     L SR     
Sbjct: 1   MDSSMCSSAPDPGMWIIQGTLAWRTPPVRTGIQLSIHSWDPGGPGGPPWL-LSSRESIHP 60

Query: 93  ISIWTAIS-RAQVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEG 151
           +S++  +S   + R     K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFFMLFP  
Sbjct: 61  LSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPRR 120

[Close]

BLAST of CaUC06G114370 vs. ExPASy Swiss-Prot
Match: Q6ENB7 (Uncharacterized protein ycf68 OS=Oryza nivara OX=4536 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 57/108 (52.78%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 49  IQGTLAWRTSPIQLSIHSW-DPGGPGGTTSAPLFSRIHTSLISIWTAISRAQ--VRPQWE 108
           I G +  R S + L+ +S    G  GG T+APLFSRIHTSLIS+W AISRAQ  VRPQWE
Sbjct: 21  IDGAIQVR-SHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEVRPQWE 80

Query: 109 NKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK 154
           N   +  +   + +     LSFWGDGGIVPFEPFF       PG L+K
Sbjct: 81  NGAPNNAS--SQTKNYEITLSFWGDGGIVPFEPFFHAF----PGGLEK 121

[Close]

BLAST of CaUC06G114370 vs. ExPASy Swiss-Prot
Match: P0C304 (Uncharacterized protein ycf68 OS=Oryza sativa OX=4530 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 57/108 (52.78%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 49  IQGTLAWRTSPIQLSIHSW-DPGGPGGTTSAPLFSRIHTSLISIWTAISRAQ--VRPQWE 108
           I G +  R S + L+ +S    G  GG T+APLFSRIHTSLIS+W AISRAQ  VRPQWE
Sbjct: 21  IDGAIQVR-SHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEVRPQWE 80

Query: 109 NKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK 154
           N   +  +   + +     LSFWGDGGIVPFEPFF       PG L+K
Sbjct: 81  NGAPNNAS--SQTKNYEITLSFWGDGGIVPFEPFFHAF----PGGLEK 121

[Close]

BLAST of CaUC06G114370 vs. ExPASy Swiss-Prot
Match: P0C305 (Uncharacterized protein ycf68 OS=Oryza sativa subsp. indica OX=39946 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 57/108 (52.78%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 49  IQGTLAWRTSPIQLSIHSW-DPGGPGGTTSAPLFSRIHTSLISIWTAISRAQ--VRPQWE 108
           I G +  R S + L+ +S    G  GG T+APLFSRIHTSLIS+W AISRAQ  VRPQWE
Sbjct: 21  IDGAIQVR-SHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEVRPQWE 80

Query: 109 NKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK 154
           N   +  +   + +     LSFWGDGGIVPFEPFF       PG L+K
Sbjct: 81  NGAPNNAS--SQTKNYEITLSFWGDGGIVPFEPFFHAF----PGGLEK 121

[Close]

BLAST of CaUC06G114370 vs. ExPASy Swiss-Prot
Match: P12173 (Uncharacterized protein ycf68 OS=Oryza sativa subsp. japonica OX=39947 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 57/108 (52.78%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 49  IQGTLAWRTSPIQLSIHSW-DPGGPGGTTSAPLFSRIHTSLISIWTAISRAQ--VRPQWE 108
           I G +  R S + L+ +S    G  GG T+APLFSRIHTSLIS+W AISRAQ  VRPQWE
Sbjct: 21  IDGAIQVR-SHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEVRPQWE 80

Query: 109 NKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKK 154
           N   +  +   + +     LSFWGDGGIVPFEPFF       PG L+K
Sbjct: 81  NGAPNNAS--SQTKNYEITLSFWGDGGIVPFEPFFHAF----PGGLEK 121

[Close]

BLAST of CaUC06G114370 vs. ExPASy Swiss-Prot
Match: P03938 (Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 70  GGPGGTTSAPLFSRIHTSLISIWTAIS-RAQVRPQWENKTEHLTTYLHRPRTTRSPLSFW 129
           G  GG     L SR     +S++  +S   ++R     K EHLTT+LHRPRTTRSPLSFW
Sbjct: 42  GRSGGGPPGLLSSRESIHPLSVYGELSLEHRLRFVLNGKMEHLTTHLHRPRTTRSPLSFW 101

Query: 130 GDGGIVPFEPFFFMLFPEGPGDLKK 154
           GDGGIVPFEPFF       PG L+K
Sbjct: 102 GDGGIVPFEPFFHAF----PGGLEK 122

[Close]

BLAST of CaUC06G114370 vs. ExPASy TrEMBL
Match: A0A7J6DSE9 (Uncharacterized protein ycf68 OS=Cannabis sativa OX=3483 GN=F8388_000228 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40
Identity = 106/192 (55.21%), Postives = 113/192 (58.85%), Query Frame = 0


Query: 33  MDSSMCSSAPDPEMWIIQGTLAWRTSPIQLSIHSWDPGGPGGTTSAPLFSRIHTSLISIW 92
           MDSSMCSSAPDPEMWIIQGTLAWRTSP+                                
Sbjct: 1   MDSSMCSSAPDPEMWIIQGTLAWRTSPV-------------------------------- 60

Query: 93  TAISRAQVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFF--FMLFPEGPGD 152
               R  VRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEP F  F    +  G 
Sbjct: 61  ----RTGVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPLFSCFSRRDQEIGS 120

Query: 153 LKKD----LRVSRVG--PGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCML 212
            +K     +  S +G  P   L A     +G ISQ+LAMV KKGGTSTLGERSTTESCML
Sbjct: 121 SRKKNAWLINNSLLGLRPPQSLRAPPISAMGFISQKLAMVGKKGGTSTLGERSTTESCML 156

Query: 213 RSGRMNRSRKGI 217
                   RK I
Sbjct: 181 LQDGPAAPRKRI 156

[Close]

BLAST of CaUC06G114370 vs. ExPASy TrEMBL
Match: A0A5A7UBD6 (Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G001070 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.1e-39
Identity = 100/176 (56.82%), Postives = 115/176 (65.34%), Query Frame = 0


Query: 32  HMDSSMCSSAPDPEMWIIQGTLAWRTSPIQLSIHSWDPGGPGGT--TSAPLFSRIHTSLI 91
           HMD SMCSSAP+ EM  I   +  R S +  + +S    G  G     + L    +    
Sbjct: 43  HMDGSMCSSAPNLEM--IDEAIQVR-SNVDPTFYSLVGSGRSGRDHLGSSLLENPYIPYQ 102

Query: 92  SIWTAISRAQV-RPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGP 151
            + + +S   + RPQWENK EHLTTYLHRPRTTRSP+SFWGDGGI             GP
Sbjct: 103 YMDSYLSSIGLGRPQWENKIEHLTTYLHRPRTTRSPISFWGDGGI-------------GP 162

Query: 152 GDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCML 205
            DLKKDLRVS+VGPGGFLNAFFFLLIGVISQ LAMVRKKGGTSTLG  ST +SC +
Sbjct: 163 EDLKKDLRVSKVGPGGFLNAFFFLLIGVISQTLAMVRKKGGTSTLGVCSTMKSCAM 202

[Close]

BLAST of CaUC06G114370 vs. ExPASy TrEMBL
Match: A0A5D3CB41 (Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00410 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.6e-37
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 101 RPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRV 160
           RPQWENKTEHLTTYLHRPRTTRSP+SFWGDGGI             GP DLKKDLRVS+V
Sbjct: 107 RPQWENKTEHLTTYLHRPRTTRSPISFWGDGGI-------------GPEDLKKDLRVSKV 166

Query: 161 GPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCML 205
           GPGGFLNAFFFLLIGVISQ+LAMVRKKGGTSTLG  ST +SC +
Sbjct: 167 GPGGFLNAFFFLLIGVISQKLAMVRKKGGTSTLGVCSTMKSCAM 197

[Close]

BLAST of CaUC06G114370 vs. ExPASy TrEMBL
Match: A0A3S3NEK2 (Uncharacterized protein ycf68 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02723900 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.5e-36
Identity = 84/123 (68.29%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 33  MDSSMCSSAPDPEMWIIQGTLAWRTSP----IQLSIHSWDPGGPGGTTSAPLFSRIHTSL 92
           MDSSMCSSAPDP MWIIQGTLAWRT P    IQLSIHSWDPGGPGG     L SR     
Sbjct: 1   MDSSMCSSAPDPGMWIIQGTLAWRTPPVRTGIQLSIHSWDPGGPGGPPWL-LSSRESIHP 60

Query: 93  ISIWTAIS-RAQVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEG 151
           +S++  +S   + R     K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFFMLFP  
Sbjct: 61  LSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPRR 120

[Close]

BLAST of CaUC06G114370 vs. ExPASy TrEMBL
Match: A0A371IGX7 (Uncharacterized protein ycf68 (Fragment) OS=Mucuna pruriens OX=157652 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 5.6e-36
Identity = 101/189 (53.44%), Postives = 109/189 (57.67%), Query Frame = 0


Query: 20  RAPDNCVVVPGLHMDSSMCSSAPDPEMWIIQGTLAWRTSPIQLSIHSWDPGGP------- 79
           RA D   VV   HMDSSMCSSAPDPEMWIIQGTLAWRTSP       W   G        
Sbjct: 288 RASDWSEVVTS-HMDSSMCSSAPDPEMWIIQGTLAWRTSPED----RWGDSGEIQCRSNF 347

Query: 80  ----------GGTTSAPLFSRIHTSLISIWTAIS---RAQVRPQWENKTEHLTTYLHRPR 139
                     GGT +  L SR     +S++  +S   R +     + KTEHLTTYLHRPR
Sbjct: 348 LFTRGIRAIRGGTITGLLSSREFIHPLSVYGQLSLEHRFRFGLNGKRKTEHLTTYLHRPR 407

Query: 140 TTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQ 189
           TTRSPLSFWGDGGI                    DLRVSRV PGG LNAF FLLIGVISQ
Sbjct: 408 TTRSPLSFWGDGGI--------------------DLRVSRVVPGGSLNAFLFLLIGVISQ 451

The following BLAST results are available for this feature:

BLAST of CaUC06G114370 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4348549.1	3.5e-40	55.21	hypothetical protein F8388_000228 [Cannabis sativa]	[more]
KAG9438629.1	6.5e-39	58.38	hypothetical protein H6P81_021434 [Aristolochia fimbriata]	[more]
KAA0050839.1	1.5e-38	56.82	putative chloroplast RF68 [Cucumis melo var. makuwa]	[more]
TYK08512.1	1.4e-36	77.88	putative chloroplast RF68 [Cucumis melo var. makuwa]	[more]
RWR97783.1	5.2e-36	68.29	hypothetical protein CKAN_02723900 [Cinnamomum micranthum f. kanehirae]	[more]

BLAST of CaUC06G114370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ENB7	1.3e-18	52.78	Uncharacterized protein ycf68 OS=Oryza nivara OX=4536 GN=ycf68-1 PE=3 SV=1	[more]
P0C304	1.3e-18	52.78	Uncharacterized protein ycf68 OS=Oryza sativa OX=4530 GN=ycf68-1 PE=3 SV=1	[more]
P0C305	1.3e-18	52.78	Uncharacterized protein ycf68 OS=Oryza sativa subsp. indica OX=39946 GN=ycf68-1 ...	[more]
P12173	1.3e-18	52.78	Uncharacterized protein ycf68 OS=Oryza sativa subsp. japonica OX=39947 GN=ycf68-...	[more]
P03938	2.0e-14	52.94	Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2	[more]

BLAST of CaUC06G114370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6DSE9	1.7e-40	55.21	Uncharacterized protein ycf68 OS=Cannabis sativa OX=3483 GN=F8388_000228 PE=3 SV...	[more]
A0A5A7UBD6	7.1e-39	56.82	Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3CB41	6.6e-37	77.88	Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A3S3NEK2	2.5e-36	68.29	Uncharacterized protein ycf68 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN...	[more]
A0A371IGX7	5.6e-36	53.44	Uncharacterized protein ycf68 (Fragment) OS=Mucuna pruriens OX=157652 GN=ycf68-1...	[more]

BLAST of CaUC06G114370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022546	Uncharacterised protein family Ycf68	PFAM	PF10839	DUF2647	coord: 70..99 e-value: 6.6E-7 score: 29.3
IPR022546	Uncharacterised protein family Ycf68	PANTHER	PTHR34890	FAMILY NOT NAMED	coord: 58..145
None	No IPR available	PANTHER	PTHR34890:SF5	SUBFAMILY NOT NAMED	coord: 58..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G114370.1	CaUC06G114370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane