CaUC06G113520 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G113520
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionC2H2-type domain-containing protein
LocationCiama_Chr06: 8424557 .. 8425057 (+)
RNA-Seq ExpressionCaUC06G113520
SyntenyCaUC06G113520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCAGAAAAACTAGGAAGTAGCTGCTCAGAGAGTTCAAGTGAATTAGAAGAACAATCAGAGGCAATAAAGGAAGATGATTATTCAGACAATTTCACCAATATTAAACGTTCATATGAATGCATATTTTGCAAACGTGGATTCACCAACGCTCAAGCTCTTGGAGGCCACATGAATATTCATAGAAAAGATAGACCCAATAAACCTCCAAAAATAGCATCTTTTTCTCCTTCTTCTTCTTCTCTTCAAAGCAACCAAGTAATTGGTTCATCCACTTTCAATAATATCCCCTTTTTTGGGCCTCCTTTGGGTATGTCTCAACTGAATTATCAAGCTTCGCCTTCTATCCCCCATGGCTACTTCCAACAACTTGGAGATTTTAATATGAACCTTTGGGGGTCAGATTTGAGCCTACAAATTGGACCAACTAAGGGGAGGAGGCAACTTTGGAATGGTGATGGTGTAGATTTGGAGCTTCGACTTGGTAATCATCCATGA

mRNA sequence

ATGGATTCAGAAAAACTAGGAAGTAGCTGCTCAGAGAGTTCAAGTGAATTAGAAGAACAATCAGAGGCAATAAAGGAAGATGATTATTCAGACAATTTCACCAATATTAAACGTTCATATGAATGCATATTTTGCAAACGTGGATTCACCAACGCTCAAGCTCTTGGAGGCCACATGAATATTCATAGAAAAGATAGACCCAATAAACCTCCAAAAATAGCATCTTTTTCTCCTTCTTCTTCTTCTCTTCAAAGCAACCAAGTAATTGGTTCATCCACTTTCAATAATATCCCCTTTTTTGGGCCTCCTTTGGGTATGTCTCAACTGAATTATCAAGCTTCGCCTTCTATCCCCCATGGCTACTTCCAACAACTTGGAGATTTTAATATGAACCTTTGGGGGTCAGATTTGAGCCTACAAATTGGACCAACTAAGGGGAGGAGGCAACTTTGGAATGGTGATGGTGTAGATTTGGAGCTTCGACTTGGTAATCATCCATGA

Coding sequence (CDS)

ATGGATTCAGAAAAACTAGGAAGTAGCTGCTCAGAGAGTTCAAGTGAATTAGAAGAACAATCAGAGGCAATAAAGGAAGATGATTATTCAGACAATTTCACCAATATTAAACGTTCATATGAATGCATATTTTGCAAACGTGGATTCACCAACGCTCAAGCTCTTGGAGGCCACATGAATATTCATAGAAAAGATAGACCCAATAAACCTCCAAAAATAGCATCTTTTTCTCCTTCTTCTTCTTCTCTTCAAAGCAACCAAGTAATTGGTTCATCCACTTTCAATAATATCCCCTTTTTTGGGCCTCCTTTGGGTATGTCTCAACTGAATTATCAAGCTTCGCCTTCTATCCCCCATGGCTACTTCCAACAACTTGGAGATTTTAATATGAACCTTTGGGGGTCAGATTTGAGCCTACAAATTGGACCAACTAAGGGGAGGAGGCAACTTTGGAATGGTGATGGTGTAGATTTGGAGCTTCGACTTGGTAATCATCCATGA

Protein sequence

MDSEKLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKIASFSPSSSSLQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPSIPHGYFQQLGDFNMNLWGSDLSLQIGPTKGRRQLWNGDGVDLELRLGNHP
Homology
BLAST of CaUC06G113520 vs. NCBI nr
Match: XP_038875027.1 (zinc finger protein 6-like [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 5.5e-70
Identity = 143/170 (84.12%), Postives = 153/170 (90.00%), Query Frame = 0

Query: 1   MDS-EKLGSSCSESSSELEEQSEAIKEDDYSDNFTN--IKRSYECIFCKRGFTNAQALGG 60
           MDS +KLGSSCSESSSEL EQSE +KEDDYSD+FTN  IKRSYECIFCKRGFTNAQALGG
Sbjct: 1   MDSDQKLGSSCSESSSEL-EQSEEVKEDDYSDSFTNNIIKRSYECIFCKRGFTNAQALGG 60

Query: 61  HMNIHRKDRPNKPPKIASFSPSSSSLQSNQVIGSST-FNNIPFFGPPLGMSQLNYQASPS 120
           HMNIHRKDRPNKPPK+ S   SSSSLQSNQ++G ST FN+IP+FGP LG SQ+NYQAS S
Sbjct: 61  HMNIHRKDRPNKPPKLIS---SSSSLQSNQILGPSTNFNSIPYFGPLLGRSQVNYQASSS 120

Query: 121 IPHGYFQQLGDFNMNLWGSDLSLQIGPTKGRRQLWNGDGVDLELRLGNHP 167
             HGYFQQLGDFNMNLWGSDLSLQIGPT GRRQLWNGDGVDLELRLG+HP
Sbjct: 121 NSHGYFQQLGDFNMNLWGSDLSLQIGPTTGRRQLWNGDGVDLELRLGHHP 166

BLAST of CaUC06G113520 vs. NCBI nr
Match: KGN61620.1 (hypothetical protein Csa_006775 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 122/173 (70.52%), Postives = 134/173 (77.46%), Query Frame = 0

Query: 8   SSCSESSS--ELEEQSEAIKED------DYSDNFTN--IKRSYECIFCKRGFTNAQALGG 67
           S+CS+SSS  +LE+     KED      +YSDNF +  IKRSYECIFCKRGFTNAQALGG
Sbjct: 10  SNCSQSSSDDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGG 69

Query: 68  HMNIHRKDRPNKPPKIA---SFSPSSSSLQS-NQVIGSSTFNNIPFFGPPLGMSQLNYQA 127
           HMNIHRKDRPNKPPK +   S S SSSSLQS NQ+IG STFNNIP+FGP LG SQ+NYQA
Sbjct: 70  HMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIPYFGPLLGESQVNYQA 129

Query: 128 SPSIPHGYFQQLGDFNMNLWGSDLSLQIGPTKGRRQLW-NGDGVDLELRLGNH 166
           S S  HG       FNMNLWGSDLSLQIG T GRR+LW NGDGVDLELRLG+H
Sbjct: 130 STSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH 177

BLAST of CaUC06G113520 vs. NCBI nr
Match: XP_023514446.1 (probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-43
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0

Query: 1   MDSEKLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMN 60
           MDSEKLGSS SESSS  EEQS+ + EDD SD+F  +KRSY CIFCKRGFTNAQALGGHMN
Sbjct: 1   MDSEKLGSS-SESSS--EEQSDRVNEDD-SDSF-GVKRSYGCIFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRPNKPPKIASFSPSSSSLQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPSIPHG 120
           IHRKDR NK  ++ASF   S  ++       STF N   F P L  S+++Y  S S P G
Sbjct: 61  IHRKDRANKAKQVASFCVPSKQIE------PSTFVNTSNFEPLLVGSKVSYAPSGSNPDG 120

Query: 121 YFQQLGDFNMNLWGSDLSLQIGPTKGRRQLWNGDGVDLELRLGNHP 167
           YFQ+LGD NMNLWG DLSL+I P+KGRR +W+G+G+DLELRLG++P
Sbjct: 121 YFQELGDLNMNLWGEDLSLRIEPSKGRRGVWSGEGLDLELRLGHYP 155

BLAST of CaUC06G113520 vs. NCBI nr
Match: XP_022930490.1 (probable transcriptional regulator RABBIT EARS [Cucurbita moschata])

HSP 1 Score: 186.4 bits (472), Expect = 2.0e-43
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0

Query: 1   MDSEKLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMN 60
           MDSEKLGSS SESSS   EQS+ + EDD SD+F  +KRSY CIFCKRGFTNAQALGGHMN
Sbjct: 1   MDSEKLGSS-SESSS--GEQSDRVNEDD-SDSF-GVKRSYGCIFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRPNKPPKIASFSPSSSSLQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPSIPHG 120
           IHRKDR NK  +IASF   S  ++       STF N P F P L  S+++Y  S S P G
Sbjct: 61  IHRKDRANKAKQIASFCVPSKQIE------PSTFVNTPNFEPLLVGSKVSYAPSGSNPDG 120

Query: 121 YFQQLGDFNMNLWGSDLSLQIGPTKGRRQLWNGDGVDLELRLGNHP 167
           YFQ+LGD NMN WG+DLSL+I P+KGRR +W+G+G+DLELRLG++P
Sbjct: 121 YFQELGDLNMNYWGNDLSLRIEPSKGRRGVWSGEGLDLELRLGHYP 155

BLAST of CaUC06G113520 vs. NCBI nr
Match: KAG6593852.1 (Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026184.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185.7 bits (470), Expect = 3.3e-43
Identity = 104/166 (62.65%), Postives = 125/166 (75.30%), Query Frame = 0

Query: 1   MDSEKLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMN 60
           MDSEKLGSS SESSS  EEQS+ + EDD SD+F  +KRSY CIFCKRGFTNAQALGGHMN
Sbjct: 1   MDSEKLGSS-SESSS--EEQSDRVNEDD-SDSF-GVKRSYGCIFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRPNKPPKIASFSPSSSSLQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPSIPHG 120
           IHRKDR NK  ++ASF   S  ++       STF N P F P L  S+++Y  S S P G
Sbjct: 61  IHRKDRANKAKQVASFCVPSKQIE------PSTFVNTPNFEPLLVGSKVSYAPSGSNPDG 120

Query: 121 YFQQLGDFNMNLWGSDLSLQIGPTKGRRQLWNGDGVDLELRLGNHP 167
           YFQ+LGD NMN WG+DLSL+I P+KGR  +W+G+G+DLELRLG++P
Sbjct: 121 YFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP 155

BLAST of CaUC06G113520 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0

Query: 25  KEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKIASFSPSSSSLQ 84
           ++ DY   F+   RSY C FCKR F +AQALGGHMN+HR+DR          SPSSSS  
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR---LQQSPSSSSTP 91

Query: 85  S----NQVIGSSTFNNIP 99
           S    N     ST  N P
Sbjct: 92  SPPYPNPNYSYSTMANSP 106

BLAST of CaUC06G113520 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07
Identity = 33/69 (47.83%), Postives = 39/69 (56.52%), Query Frame = 0

Query: 5  KLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMNIHRK 64
          K    CS+S S+   Q          D+  N  RSY C FC RGF+NAQALGGHMNIHR+
Sbjct: 8  KNADDCSDSISKNSHQG--------VDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRR 67

Query: 65 DRPNKPPKI 74
          DR     K+
Sbjct: 68 DRAKLRQKL 68

BLAST of CaUC06G113520 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 0

Query: 38 RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKIASFSPSSS 82
          RSY C FC R F +AQALGGHMN+HR+DR     K  S SPSS+
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARL--KQQSLSPSST 94

BLAST of CaUC06G113520 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 0

Query: 12  ESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKP- 71
           +S+ E   +  A  EDD + +     RSY C FC+R F +AQALGGHMN+HR+DR     
Sbjct: 12  KSNKESSWEELAFAEDDAAGSLWP-PRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ 71

Query: 72  -------PKIASFSPSSSSLQSNQVIGSS----TFNNIPFFGPPLGMSQLNYQASPSIPH 120
                  PK +S     S   S+ +  +S     FN  P +        ++  +S S+P+
Sbjct: 72  ADDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHSCVIDLSSSSSLPY 130

BLAST of CaUC06G113520 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 26/61 (42.62%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 38  RSYECIFCKRGFTNAQALGGHMNIHRKDR------------PNKPPKIASFSPSSSSLQS 87
           ++Y C FC+R F +AQALGGHMN+HR+DR            P+    IA+ +P+ SS  S
Sbjct: 47  KNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSSSSS 106

BLAST of CaUC06G113520 vs. ExPASy TrEMBL
Match: A0A0A0LI91 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G190770 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.6e-52
Identity = 122/173 (70.52%), Postives = 134/173 (77.46%), Query Frame = 0

Query: 8   SSCSESSS--ELEEQSEAIKED------DYSDNFTN--IKRSYECIFCKRGFTNAQALGG 67
           S+CS+SSS  +LE+     KED      +YSDNF +  IKRSYECIFCKRGFTNAQALGG
Sbjct: 10  SNCSQSSSDDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRGFTNAQALGG 69

Query: 68  HMNIHRKDRPNKPPKIA---SFSPSSSSLQS-NQVIGSSTFNNIPFFGPPLGMSQLNYQA 127
           HMNIHRKDRPNKPPK +   S S SSSSLQS NQ+IG STFNNIP+FGP LG SQ+NYQA
Sbjct: 70  HMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIPYFGPLLGESQVNYQA 129

Query: 128 SPSIPHGYFQQLGDFNMNLWGSDLSLQIGPTKGRRQLW-NGDGVDLELRLGNH 166
           S S  HG       FNMNLWGSDLSLQIG T GRR+LW NGDGVDLELRLG+H
Sbjct: 130 STSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH 177

BLAST of CaUC06G113520 vs. ExPASy TrEMBL
Match: A0A6J1EX07 (probable transcriptional regulator RABBIT EARS OS=Cucurbita moschata OX=3662 GN=LOC111436930 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 9.5e-44
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0

Query: 1   MDSEKLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMN 60
           MDSEKLGSS SESSS   EQS+ + EDD SD+F  +KRSY CIFCKRGFTNAQALGGHMN
Sbjct: 1   MDSEKLGSS-SESSS--GEQSDRVNEDD-SDSF-GVKRSYGCIFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRPNKPPKIASFSPSSSSLQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPSIPHG 120
           IHRKDR NK  +IASF   S  ++       STF N P F P L  S+++Y  S S P G
Sbjct: 61  IHRKDRANKAKQIASFCVPSKQIE------PSTFVNTPNFEPLLVGSKVSYAPSGSNPDG 120

Query: 121 YFQQLGDFNMNLWGSDLSLQIGPTKGRRQLWNGDGVDLELRLGNHP 167
           YFQ+LGD NMN WG+DLSL+I P+KGRR +W+G+G+DLELRLG++P
Sbjct: 121 YFQELGDLNMNYWGNDLSLRIEPSKGRRGVWSGEGLDLELRLGHYP 155

BLAST of CaUC06G113520 vs. ExPASy TrEMBL
Match: A0A6J1KKB3 (zinc finger protein GIS-like OS=Cucurbita maxima OX=3661 GN=LOC111494795 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.3e-42
Identity = 104/166 (62.65%), Postives = 124/166 (74.70%), Query Frame = 0

Query: 1   MDSEKLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMN 60
           MDSEKL SS SESSS  EEQS+ + EDD SD+F  +KRSY CIFCKRGFTNAQALGGHMN
Sbjct: 1   MDSEKLSSS-SESSS--EEQSDRVNEDD-SDSF-RVKRSYGCIFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRPNKPPKIASFSPSSSSLQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPSIPHG 120
           IHRKDR NK  +IASF   S   +       STF + P F P L  S+++Y+AS S P G
Sbjct: 61  IHRKDRANKAKQIASFCVPSKQSE------PSTFVSTPNFEPLLVGSKVSYEASGSNPDG 120

Query: 121 YFQQLGDFNMNLWGSDLSLQIGPTKGRRQLWNGDGVDLELRLGNHP 167
           YFQ  G+ NMNLWG DLSL+I P+KGRR +W+G+G+DLELRLG++P
Sbjct: 121 YFQGHGNLNMNLWGEDLSLRIEPSKGRRGVWSGEGLDLELRLGHYP 155

BLAST of CaUC06G113520 vs. ExPASy TrEMBL
Match: A0A6J1CE07 (transcriptional regulator TAC1-like OS=Momordica charantia OX=3673 GN=LOC111009842 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 102/173 (58.96%), Postives = 123/173 (71.10%), Query Frame = 0

Query: 1   MDSEKLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMN 60
           MDSEKL  S S+SSSE E++SEAI + D     TN KRSY CIFCKRGFTNAQALGGHMN
Sbjct: 1   MDSEKLLGSSSDSSSE-EQESEAIIKADSEYCLTN-KRSYGCIFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRPNKPPKI--ASFSPSSSSLQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPSIP 120
           IHRKDR NKP +I  +S S SSSS   ++ I  S F N  +FG P    +++++ S S P
Sbjct: 61  IHRKDRANKPKQITTSSSSYSSSSCVPSKQIEDSNFMNTLYFGRP----RVDFEESGSNP 120

Query: 121 HGYFQQLGDFN--MNLWGSDLSLQIGPTKGRRQ---LW--NGDGVDLELRLGN 165
            GYFQ+LGD N    LWGSDLSLQI P+KGR +   +W  NG+G+DLELRLG+
Sbjct: 121 RGYFQELGDLNKKQELWGSDLSLQIAPSKGRIRRGTIWNNNGEGLDLELRLGH 167

BLAST of CaUC06G113520 vs. ExPASy TrEMBL
Match: A0A5N5FEY0 (Transcriptional regulator SUPERMAN-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_010063 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.9e-24
Identity = 78/182 (42.86%), Postives = 103/182 (56.59%), Query Frame = 0

Query: 12  ESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPP 71
           E+SS  E+Q   +++DD+    T +KRSYEC FCKRGFTNAQALGGHMNIHRKDR     
Sbjct: 10  ETSSSDEDQ---VRDDDHDSGATTVKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ 69

Query: 72  KIASFSPSSSSLQSN--QVIGSSTFNNIPFFGPPLG----------MSQLNYQ------- 131
            I+  S  +S+  SN  Q I  ST ++  +   P+           + Q+NYQ       
Sbjct: 70  LISGTSSLNSNHYSNEDQYISMSTSHHHQYSSAPISSQGASGYYPVLDQMNYQMYFQPNG 129

Query: 132 ASPSIPHGY----------FQQLGDFNMNLWGSDLSLQIGPTKGRRQLWNGDGVDLELRL 165
           + P IP+GY           Q LG  N  LWG++LSL++   + RR + + D VDLELRL
Sbjct: 130 SKPRIPYGYDHDDSSVGSRSQSLG-MNQELWGANLSLRLEDDEFRRGVRSNDEVDLELRL 187

BLAST of CaUC06G113520 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 58/166 (34.94%), Postives = 77/166 (46.39%), Query Frame = 0

Query: 25  KEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKIASFS--PSSSS 84
           K+ D        +R+Y+C  CKRGFTN QALGGH NIHR++R   P   +S    P S  
Sbjct: 6   KQIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFPFSLP 65

Query: 85  LQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPSI-PHGYFQQLGDFNMNLWGS------ 144
           L S     S+ F N P + P +  S L+  + P I P    Q  G  + +  G       
Sbjct: 66  LPSQSPSSSTNFTNPPPYFPTI-ESYLHQGSQPPINPSHNTQYFGSSSSSRGGGRFAQGA 125

Query: 145 --DLSLQIG--------------PTKGRRQLWNGDGVDLELRLGNH 166
             DL+L +G              P  G  Q  +GD +DL+LRLG H
Sbjct: 126 SHDLNLSLGLGSMNEDDDTHRSPPETGGSQPQDGD-LDLDLRLGGH 169

BLAST of CaUC06G113520 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 9.5e-12
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 0

Query: 10 CSESSSELEEQSEAIKEDDYSDN--FTNIKRSYECIFCKRGFTNAQALGGHMNIHRKDRP 69
          C  SSS    ++ A++    S +   T  +R YEC FCKRGFTNAQALGGHMNIHR+DR 
Sbjct: 3  CERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRL 62

BLAST of CaUC06G113520 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-09
Identity = 58/197 (29.44%), Postives = 84/197 (42.64%), Query Frame = 0

Query: 16  ELEEQSEAIK----EDDYSDNFTNI---KRSYECIFCKRGFTNAQALGGHMNIHRKDRPN 75
           ELE+  E+ +    E D   N +      RSY C FC+R F +AQALGGHMN+HR+DR +
Sbjct: 15  ELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRAS 74

Query: 76  KPPKIASFSPSSSSLQSNQVIGSSTFNNIPFFGPPLGMSQLNYQASPS------------ 135
                 +   S+ +  +    G    N+     PPL  + L  Q++ S            
Sbjct: 75  S----RAHQGSTVAAAARSGHGGMLLNSC---APPLPTTTLIIQSTASNIEGLSHFYQLQ 134

Query: 136 IPHGYFQQLGDFNMNLWGS--------DLSLQIGPTKGRRQL------------------ 167
            P G F   GD  +NL+G+          S+   P +   +L                  
Sbjct: 135 NPSGIFGNSGDM-VNLYGTTSFPPSNLPFSMLNSPVEVPPRLIEYSTGDDESIGSMKEAT 194

BLAST of CaUC06G113520 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0

Query: 25  KEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKIASFSPSSSSLQ 84
           ++ DY   F+   RSY C FCKR F +AQALGGHMN+HR+DR          SPSSSS  
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR---LQQSPSSSSTP 91

Query: 85  S----NQVIGSSTFNNIP 99
           S    N     ST  N P
Sbjct: 92  SPPYPNPNYSYSTMANSP 106

BLAST of CaUC06G113520 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 )

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 33/69 (47.83%), Postives = 39/69 (56.52%), Query Frame = 0

Query: 5  KLGSSCSESSSELEEQSEAIKEDDYSDNFTNIKRSYECIFCKRGFTNAQALGGHMNIHRK 64
          K    CS+S S+   Q          D+  N  RSY C FC RGF+NAQALGGHMNIHR+
Sbjct: 8  KNADDCSDSISKNSHQG--------VDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRR 67

Query: 65 DRPNKPPKI 74
          DR     K+
Sbjct: 68 DRAKLRQKL 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875027.15.5e-7084.12zinc finger protein 6-like [Benincasa hispida][more]
KGN61620.11.1e-5170.52hypothetical protein Csa_006775 [Cucumis sativus][more]
XP_023514446.11.2e-4363.25probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo][more]
XP_022930490.12.0e-4363.25probable transcriptional regulator RABBIT EARS [Cucurbita moschata][more]
KAG6593852.13.3e-4362.65Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia] ... [more]
Match NameE-valueIdentityDescription
Q388951.8e-0747.44Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S... [more]
Q9SR341.8e-0747.83Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1[more]
Q9LHS91.2e-0661.36Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G... [more]
O809421.7e-0532.50Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1[more]
Q9SLB81.7e-0542.62Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LI915.6e-5270.52C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G190770 P... [more]
A0A6J1EX079.5e-4463.25probable transcriptional regulator RABBIT EARS OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1KKB32.3e-4262.65zinc finger protein GIS-like OS=Cucurbita maxima OX=3661 GN=LOC111494795 PE=4 SV... [more]
A0A6J1CE071.1e-3658.96transcriptional regulator TAC1-like OS=Momordica charantia OX=3673 GN=LOC1110098... [more]
A0A5N5FEY04.9e-2442.86Transcriptional regulator SUPERMAN-like OS=Pyrus ussuriensis x Pyrus communis OX... [more]
Match NameE-valueIdentityDescription
AT3G23140.11.0e-1334.94C2H2 and C2HC zinc fingers superfamily protein [more]
AT5G43540.19.5e-1256.45C2H2 and C2HC zinc fingers superfamily protein [more]
AT4G17810.15.8e-0929.44C2H2 and C2HC zinc fingers superfamily protein [more]
AT3G23130.11.3e-0847.44C2H2 and C2HC zinc fingers superfamily protein [more]
AT3G09290.11.3e-0847.83telomerase activator1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 12..94
e-value: 3.3E-6
score: 28.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR45801OS07G0101800 PROTEINcoord: 11..166
NoneNo IPR availablePANTHERPTHR45801:SF43C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEINcoord: 11..166
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..62
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 40..67
score: 12.216621
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 38..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G113520.1CaUC06G113520.1mRNA