CaUC06G112900 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTCCCCCATCAACCCTCTCCAAAATTTGTCCCTCTCTGTCTATATAAATCCCTCCACAACATTCCTCTATTTCTCAATTCAAATTCCCACAAAAGGCAAAAACTTCAAAACAAAAAACAAAAAGGCCCAAAATGAAACTTATTAGCCCCCTTCTATCACTCTTGGCCTTGGCTTTGGTGGCTATTCCTCCAGTGAATGGGCAGACGAATGTGCCATGTAGTGCCTCTATGCTCTCGAGCTTCAGCCCTTGTTTGAACTTTGTCACCAACAGCTCTGCCAACGGCACTTCCCCGACCGCTGATTGTTGTAACTCGATTCGGTCACTCGCAAGCGGCGGTCGGGACTGCCTCTGCCTCATTGTCACCGGAGGAGTTCCCTTTCAAATTCCCATCAATAGGACTCTTGCCATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGGTATACAAGTTTCTAATTTCTCCTTAATTATCATAGTTATGGATTAGATCACATCCTTCTTGATTTGAAACATAATCTTTAAATAATATTATTAATGTTTTAATGATGTTAATATTAGTGATGAGTAAATAACACTTGCCTATACTAGTAAGTAGAAACTTCTACCTTTGCAAAAAAATATGTAGAAACTTCTACTTATTCGTACACAAGTGATGTATAAGAGTTATTACTTGTTACTTGTTAGACATGTAATTGAAAATCAATTAATTTACGGAGTAATAAAAAATCTTTGAAGTATAGAAATAAAAAGAAGACAACTATCAACTAGACACAAGTTTGAAAGGTTAGTATATATTGGTAATTTGACCTTGTTTGATACCTATTTGATTTTAGAGTTCTAAAAATTTAAGTTCTCATTGGTAAATTTATTTGCTTTGTTACTTATTTTTTAGGACTATTTTCAAATATAAAAAATGAACTAAAATATTTACAAATATAGCAAAGTTTTCCTATCTATCTGTGACAGACTACTATTCAACAGTTTTGTCATTTAAATTAATTTCTCTATTTTTTACCAATGTTTTTTAAATTCATTCTAAATTTTAAAAAAGAAATTTTGAATAGGTTGCTTTTACCAATGTTTTATGAATTTTTTTGTTTTTATAATTTTTTTTAAAAAAATTTCATTGCGTCAACCGTTTTATAAAATTGGAATAGTCTACATTTTAAACTTTGTTCTTACACAAAGTTGATACCATTTGAAAAATAGGAAATGTGAAAATAATAATAATAATAGTAATAAAAAAATAATAAAAAAAAAAAATTAAAATAAGAAACCAAAAAAGCTGTATTGGATTTGTTAGGAAATTACTAAACTGGGTACCCTTGTTTCAGCCTCTGCTGCTCCAGTTCCCGCTCCAGGTACCATTTTCTAAACAAACTTCATCTTCTTCCTCATAATCTTATCGCTGAAATTTCCAGTTTTTCCCCGTTAACATTCTGAAATTTACAGGCCCAATCCCTTTTGGACCAAGTCTTCCTCCACAACCTTCACCATCGGGCAGTGTCAGTCCTCAAGGTAATCAATAATCTCAATTCATCCAATCACTCTGTTTTCTATTCTCCTCTCTAAAACTTGGCTTTTTGCAGCGCCGGAACCCACCACGCCGGCTCTTGCTCCATCTTTTCCGGTGGTTCCTGAAGCTGGAGCTCCGTCGGAGACTGGCGGAAGTCGACCAGTTCTCACTCCATCCTCCGCCGTCCCTTCAAACAGTCTTCCACATCCTTTTCTGCTTCTGGGATTTGCATTTGTAATTTTGAAAATCAACTGATTGTATGATATTATGATTGTTCCTCAGGATTCCGATTCTTTGTTTGAAAATTGAATGGATTTGATCGGAGTATTATAATTCTGTTCGTTCTCTGTTTCATTTGCCGAAGGGTTAAAGGGTACTTTCGGGAATTCACTCGTGCTTCCCGCTATTTTCAC AACTCCCCCATCAACCCTCTCCAAAATTTGTCCCTCTCTGTCTATATAAATCCCTCCACAACATTCCTCTATTTCTCAATTCAAATTCCCACAAAAGGCAAAAACTTCAAAACAAAAAACAAAAAGGCCCAAAATGAAACTTATTAGCCCCCTTCTATCACTCTTGGCCTTGGCTTTGGTGGCTATTCCTCCAGTGAATGGGCAGACGAATGTGCCATGTAGTGCCTCTATGCTCTCGAGCTTCAGCCCTTGTTTGAACTTTGTCACCAACAGCTCTGCCAACGGCACTTCCCCGACCGCTGATTGTTGTAACTCGATTCGGTCACTCGCAAGCGGCGGTCGGGACTGCCTCTGCCTCATTGTCACCGGAGGAGTTCCCTTTCAAATTCCCATCAATAGGACTCTTGCCATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGCCTCTGCTGCTCCAGTTCCCGCTCCAGGCCCAATCCCTTTTGGACCAAGTCTTCCTCCACAACCTTCACCATCGGGCAGTGTCAGTCCTCAAGCGCCGGAACCCACCACGCCGGCTCTTGCTCCATCTTTTCCGGTGGTTCCTGAAGCTGGAGCTCCGTCGGAGACTGGCGGAAGTCGACCAGTTCTCACTCCATCCTCCGCCGTCCCTTCAAACAGTCTTCCACATCCTTTTCTGCTTCTGGGATTTGCATTTGTAATTTTGAAAATCAACTGATTGTATGATATTATGATTGTTCCTCAGGATTCCGATTCTTTGTTTGAAAATTGAATGGATTTGATCGGAGTATTATAATTCTGTTCGTTCTCTGTTTCATTTGCCGAAGGGTTAAAGGGTACTTTCGGGAATTCACTCGTGCTTCCCGCTATTTTCAC ATGAAACTTATTAGCCCCCTTCTATCACTCTTGGCCTTGGCTTTGGTGGCTATTCCTCCAGTGAATGGGCAGACGAATGTGCCATGTAGTGCCTCTATGCTCTCGAGCTTCAGCCCTTGTTTGAACTTTGTCACCAACAGCTCTGCCAACGGCACTTCCCCGACCGCTGATTGTTGTAACTCGATTCGGTCACTCGCAAGCGGCGGTCGGGACTGCCTCTGCCTCATTGTCACCGGAGGAGTTCCCTTTCAAATTCCCATCAATAGGACTCTTGCCATTTCACTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGCCTCTGCTGCTCCAGTTCCCGCTCCAGGCCCAATCCCTTTTGGACCAAGTCTTCCTCCACAACCTTCACCATCGGGCAGTGTCAGTCCTCAAGCGCCGGAACCCACCACGCCGGCTCTTGCTCCATCTTTTCCGGTGGTTCCTGAAGCTGGAGCTCCGTCGGAGACTGGCGGAAGTCGACCAGTTCTCACTCCATCCTCCGCCGTCCCTTCAAACAGTCTTCCACATCCTTTTCTGCTTCTGGGATTTGCATTTGTAATTTTGAAAATCAACTGA MKLISPLLSLLALALVAIPPVNGQTNVPCSASMLSSFSPCLNFVTNSSANGTSPTADCCNSIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNASAAPVPAPGPIPFGPSLPPQPSPSGSVSPQAPEPTTPALAPSFPVVPEAGAPSETGGSRPVLTPSSAVPSNSLPHPFLLLGFAFVILKIN Homology
BLAST of CaUC06G112900 vs. NCBI nr
Match: XP_038874253.1 (non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida]) HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85 Identity = 175/198 (88.38%), Postives = 182/198 (91.92%), Query Frame = 0
BLAST of CaUC06G112900 vs. NCBI nr
Match: XP_008447160.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo] >KAA0040812.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa] >TYK17789.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77 Identity = 166/200 (83.00%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of CaUC06G112900 vs. NCBI nr
Match: XP_011659016.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KGN44233.1 hypothetical protein Csa_015516 [Cucumis sativus]) HSP 1 Score: 295.4 bits (755), Expect = 3.6e-76 Identity = 162/202 (80.20%), Postives = 173/202 (85.64%), Query Frame = 0
BLAST of CaUC06G112900 vs. NCBI nr
Match: XP_023549160.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 289.7 bits (740), Expect = 2.0e-74 Identity = 163/206 (79.13%), Postives = 174/206 (84.47%), Query Frame = 0
BLAST of CaUC06G112900 vs. NCBI nr
Match: KAG7013542.1 (hypothetical protein SDJN02_23708 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 289.3 bits (739), Expect = 2.6e-74 Identity = 162/206 (78.64%), Postives = 175/206 (84.95%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy Swiss-Prot
Match: Q9LJ85 (Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3702 GN=LTPG20 PE=2 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 3.4e-37 Identity = 103/205 (50.24%), Postives = 131/205 (63.90%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy Swiss-Prot
Match: Q1G2Y5 (Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3702 GN=LTPG21 PE=2 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 6.1e-34 Identity = 95/200 (47.50%), Postives = 119/200 (59.50%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy Swiss-Prot
Match: Q94AX3 (Non-specific lipid transfer protein GPI-anchored 16 OS=Arabidopsis thaliana OX=3702 GN=LTPG16 PE=2 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.8e-28 Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.5e-08 Identity = 62/196 (31.63%), Postives = 91/196 (46.43%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 4.8e-07 Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy TrEMBL
Match: A0A5D3D3P8 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00330 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 5.4e-78 Identity = 166/200 (83.00%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy TrEMBL
Match: A0A1S3BGS3 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103489676 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 5.4e-78 Identity = 166/200 (83.00%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy TrEMBL
Match: A0A0A0K3Y9 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G232570 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.8e-76 Identity = 162/202 (80.20%), Postives = 173/202 (85.64%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy TrEMBL
Match: A0A6J1KWN9 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111499392 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.1e-74 Identity = 162/206 (78.64%), Postives = 174/206 (84.47%), Query Frame = 0
BLAST of CaUC06G112900 vs. ExPASy TrEMBL
Match: A0A6J1H4D0 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata OX=3662 GN=LOC111460366 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.7e-74 Identity = 161/206 (78.16%), Postives = 174/206 (84.47%), Query Frame = 0
BLAST of CaUC06G112900 vs. TAIR 10
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 156.4 bits (394), Expect = 2.4e-38 Identity = 103/205 (50.24%), Postives = 131/205 (63.90%), Query Frame = 0
BLAST of CaUC06G112900 vs. TAIR 10
Match: AT1G05450.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 145.6 bits (366), Expect = 4.3e-35 Identity = 95/200 (47.50%), Postives = 119/200 (59.50%), Query Frame = 0
BLAST of CaUC06G112900 vs. TAIR 10
Match: AT2G48140.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29 Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 0
BLAST of CaUC06G112900 vs. TAIR 10
Match: AT2G48140.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 113.2 bits (282), Expect = 2.4e-25 Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of CaUC06G112900 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 5.3e-09 Identity = 62/196 (31.63%), Postives = 91/196 (46.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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