CaUC06G112040 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G112040
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Peroxidase
Location	Ciama_Chr06: 6550138 .. 6550530 (+)
RNA-Seq Expression	CaUC06G112040
Synteny	CaUC06G112040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGTGATCGAGATCAAGCTGCCATTGGTTTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACCGTGTTGGAGTATAGTTACAAGGAGGAAGAAGAAGAGGAAGAAGAAGAGTCGAGTAATGATGTGGGTGTGGTTCATAATATGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGTATGGCGGGTGGGTATCCCTGA

mRNA sequence

ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGTGATCGAGATCAAGCTGCCATTGGTTTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACCGTGTTGGAGTATAGTTACAAGGAGGAAGAAGAAGAGGAAGAAGAAGAGTCGAGTAATGATGTGGGTGTGGTTCATAATATGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGTATGGCGGGTGGGTATCCCTGA

Coding sequence (CDS)

ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGTGATCGAGATCAAGCTGCCATTGGTTTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACCGTGTTGGAGTATAGTTACAAGGAGGAAGAAGAAGAGGAAGAAGAAGAGTCGAGTAATGATGTGGGTGTGGTTCATAATATGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGTATGGCGGGTGGGTATCCCTGA

Protein sequence

MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSLDFQDDGDGDRDQAAIGLIGDGERRRSGTVLEYSYKEEEEEEEEESSNDVGVVHNMDEMEDKLFWDTCMAGGYP

Homology

[Close]

BLAST of CaUC06G112040 vs. NCBI nr
Match: KAA0033453.1 (hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 4.9e-50
Identity = 112/136 (82.35%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRS 60
           MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV  DDQEDACSCSC  NDF+ DDLR+
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60

Query: 61  LDFQDDGD-GDRD-QAAIGLIGDGERRRSGTVLEYSYKEEEEEEEEESSNDVGVVHNMDE 120
           LDFQDDGD GDRD    I LIGDG RRRSG  L+Y Y+EEEEEEEEESS+DVGV+ NM+E
Sbjct: 61  LDFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNMNE 120

Query: 121 MEDKLFWDTCMAGGYP 131
           MEDKLFWDTCMAGGYP
Sbjct: 121 MEDKLFWDTCMAGGYP 136

[Close]

BLAST of CaUC06G112040 vs. NCBI nr
Match: KAG6575041.1 (hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.9 bits (411), Expect = 1.8e-36
Identity = 89/134 (66.42%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 4   IKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSLDFQDDG 63
           + +ASS FLWED+ADSEVDRLLSHPH+LESAVDD EDA SCSC+D+AT D  ++D QDDG
Sbjct: 1   MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYAT-DRSAVDLQDDG 60

Query: 64  DGDRDQAAIGLIGD-------GERRRSGTVLEYSYKEEEEEEEEESSNDVGVVHNMDEME 123
           DGD D+ A+G  GD        E R SG  LEYS  EE+EEEEEES+N+VG + +M+EME
Sbjct: 61  DGDEDR-AVGSTGDDARSSHLDETRPSGATLEYS-SEEDEEEEEESNNNVGAIRDMNEME 120

Query: 124 DKLFWDTCMAGGYP 131
           DKLFWDTCM GGYP
Sbjct: 121 DKLFWDTCMEGGYP 131

[Close]

BLAST of CaUC06G112040 vs. NCBI nr
Match: KAE8646684.1 (hypothetical protein Csa_005604 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 5.1e-31
Identity = 86/122 (70.49%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 16  SADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDLRSLDFQDDGDGDRDQ 75
           SADSEVD+LLSH PH+LESAV   DDQEDACSCSC  NDF+ DD +     D+GDGD+D 
Sbjct: 31  SADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQD- 90

Query: 76  AAIGLIGDGERRRSGTVLEYSYKEEEEEEEEESS-NDVGVVHNMDEMEDKLFWDTCMAGG 131
             IGLIGDG RRRSG      Y+EEEEEEEEESS NDVG + NM+EMEDK+FWDTCMAGG
Sbjct: 91  --IGLIGDGGRRRSGA----GYEEEEEEEEEESSNNDVGAIRNMNEMEDKVFWDTCMAGG 145

[Close]

BLAST of CaUC06G112040 vs. NCBI nr
Match: KDO74975.1 (hypothetical protein CISIN_1g032474mg [Citrus sinensis])

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-08
Identity = 54/141 (38.30%), Postives = 77/141 (54.61%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSC+             +L+
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67

Query: 66  SLDFQDDGDGDRDQAAIGLIGDGERRRS-GTVLEYSYKEEEEEEEEESSNDVGVVHNM-- 125
           + +F DDGDG           D  R+ +  +  +  + +  ++EEE SS D+G+ +N+  
Sbjct: 68  NEEFDDDGDGSST--------DQHRQINWSSSCKIWWADGADDEEEYSSWDIGINNNISR 127

Query: 126 ---DEMEDKLFWDTCMAGGYP 131
              DEMED+LFW+TCMA GYP
Sbjct: 128 KVKDEMEDRLFWETCMAFGYP 140

[Close]

BLAST of CaUC06G112040 vs. NCBI nr
Match: GAY36063.1 (hypothetical protein CUMW_020050 [Citrus unshiu])

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-07
Identity = 54/141 (38.30%), Postives = 75/141 (53.19%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSC+             D +
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHDHK 67

Query: 66  SLDFQDDGDGDRDQAAIGLIGDGERRRS-GTVLEYSYKEEEEEEEEESSNDVGVVHNM-- 125
           + +  DDGDG           D  R+ + G   +  + +  ++EEE SS D+G+ +N+  
Sbjct: 68  NEESNDDGDGSST--------DQHRQINWGGSCKIWWADAADDEEEYSSWDIGINNNISR 127

Query: 126 ---DEMEDKLFWDTCMAGGYP 131
              DEMED+LFW+TCMA GYP
Sbjct: 128 KVKDEMEDRLFWETCMAFGYP 140

[Close]

BLAST of CaUC06G112040 vs. ExPASy TrEMBL
Match: A0A5A7SSL9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001140 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50
Identity = 112/136 (82.35%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRS 60
           MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV  DDQEDACSCSC  NDF+ DDLR+
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60

Query: 61  LDFQDDGD-GDRD-QAAIGLIGDGERRRSGTVLEYSYKEEEEEEEEESSNDVGVVHNMDE 120
           LDFQDDGD GDRD    I LIGDG RRRSG  L+Y Y+EEEEEEEEESS+DVGV+ NM+E
Sbjct: 61  LDFQDDGDNGDRDLDQDICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNMNE 120

Query: 121 MEDKLFWDTCMAGGYP 131
           MEDKLFWDTCMAGGYP
Sbjct: 121 MEDKLFWDTCMAGGYP 136

[Close]

BLAST of CaUC06G112040 vs. ExPASy TrEMBL
Match: A0A0A0KBF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40
Identity = 101/137 (73.72%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDL 60
           MDQIKDASSFFLWEDSADSEVD+LLSH PH+LESAV   DDQEDACSCSC  NDF+ DD 
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNNNDFSIDDF 60

Query: 61  RSLDFQDDGDGDRDQAAIGLIGDGERRRSGTVLEYSYKEEEEEEEEESS-NDVGVVHNMD 120
           +     D+GDGD+D   IGLIGDG RRRSG      Y+EEEEEEEEESS NDVG + NM+
Sbjct: 61  QDAYDGDNGDGDQD---IGLIGDGGRRRSGA----GYEEEEEEEEEESSNNDVGAIRNMN 120

Query: 121 EMEDKLFWDTCMAGGYP 131
           EMEDK+FWDTCMAGGYP
Sbjct: 121 EMEDKVFWDTCMAGGYP 130

[Close]

BLAST of CaUC06G112040 vs. ExPASy TrEMBL
Match: A0A067G8N3 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032474mg PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-08
Identity = 54/141 (38.30%), Postives = 77/141 (54.61%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSC+             +L+
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67

Query: 66  SLDFQDDGDGDRDQAAIGLIGDGERRRS-GTVLEYSYKEEEEEEEEESSNDVGVVHNM-- 125
           + +F DDGDG           D  R+ +  +  +  + +  ++EEE SS D+G+ +N+  
Sbjct: 68  NEEFDDDGDGSST--------DQHRQINWSSSCKIWWADGADDEEEYSSWDIGINNNISR 127

Query: 126 ---DEMEDKLFWDTCMAGGYP 131
              DEMED+LFW+TCMA GYP
Sbjct: 128 KVKDEMEDRLFWETCMAFGYP 140

[Close]

BLAST of CaUC06G112040 vs. ExPASy TrEMBL
Match: A0A2H5N748 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.6e-08
Identity = 54/141 (38.30%), Postives = 75/141 (53.19%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSC+             D +
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHDHK 67

Query: 66  SLDFQDDGDGDRDQAAIGLIGDGERRRS-GTVLEYSYKEEEEEEEEESSNDVGVVHNM-- 125
           + +  DDGDG           D  R+ + G   +  + +  ++EEE SS D+G+ +N+  
Sbjct: 68  NEESNDDGDGSST--------DQHRQINWGGSCKIWWADAADDEEEYSSWDIGINNNISR 127

Query: 126 ---DEMEDKLFWDTCMAGGYP 131
              DEMED+LFW+TCMA GYP
Sbjct: 128 KVKDEMEDRLFWETCMAFGYP 140

[Close]

BLAST of CaUC06G112040 vs. ExPASy TrEMBL
Match: A0A5E4EN68 (PREDICTED: LOC110601647 OS=Prunus dulcis OX=3755 GN=ALMOND_2B000347 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.6e-06
Identity = 54/137 (39.42%), Postives = 66/137 (48.18%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLL-------SHPHELESAVDDQEDACSCSCNDFATDDLRSLD 65
           D S FFLWEDSADSE D          S   E+    +D E   S + +D A     +LD
Sbjct: 9   DVSCFFLWEDSADSEADHHTGPLNADNSSKIEIALEAEDAESCSSGTLSDHAFGACEALD 68

Query: 66  FQDDGDGDRDQ----AAIGLIGDGERRRSGTVLEYSYKEEEEEEEEESSNDVGVVHNMDE 125
                  +R Q    + +GL  D            S  EE+EEEE ES     V  +MDE
Sbjct: 69  SYCKNAEERQQSRCSSKVGLQSDAG----------SGYEEDEEEEVESKMVCHVNKSMDE 128

Query: 126 M-EDKLFWDTCMAGGYP 131
           M ED+LFW+TCMA GYP
Sbjct: 129 MEEDRLFWETCMAVGYP 135

The following BLAST results are available for this feature:

BLAST of CaUC06G112040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033453.1	4.9e-50	82.35	hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa]	[more]
KAG6575041.1	1.8e-36	66.42	hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8646684.1	5.1e-31	70.49	hypothetical protein Csa_005604 [Cucumis sativus]	[more]
KDO74975.1	2.1e-08	38.30	hypothetical protein CISIN_1g032474mg [Citrus sinensis]	[more]
GAY36063.1	1.4e-07	38.30	hypothetical protein CUMW_020050 [Citrus unshiu]	[more]

BLAST of CaUC06G112040 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G112040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSL9	2.4e-50	82.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KBF3	1.3e-40	73.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1	[more]
A0A067G8N3	1.0e-08	38.30	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032474mg PE=4 SV=1	[more]
A0A2H5N748	6.6e-08	38.30	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1	[more]
A0A5E4EN68	3.6e-06	39.42	PREDICTED: LOC110601647 OS=Prunus dulcis OX=3755 GN=ALMOND_2B000347 PE=4 SV=1	[more]

BLAST of CaUC06G112040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..109
None	No IPR available	PANTHER	PTHR35726	GLUTAMIC ACID-RICH PROTEIN-LIKE	coord: 2..130
None	No IPR available	PANTHER	PTHR35726:SF5	SUBFAMILY NOT NAMED	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G112040.1	CaUC06G112040.1	mRNA