CaUC06G111480 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G111480
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Ribosomal protein L19e family protein isoform 1
Location	Ciama_Chr06: 5890989 .. 5891597 (+)
RNA-Seq Expression	CaUC06G111480
Synteny	CaUC06G111480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTCGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCGCCGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCTCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAGAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGTGGAGATGGCGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAAATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

mRNA sequence

ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTCGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCGCCGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCTCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAGAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGTGGAGATGGCGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAAATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

Coding sequence (CDS)

ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTCGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCGCCGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCTCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAGAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGTGGAGATGGCGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAAATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

Protein sequence

MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGDGGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC

Homology

[Close]

BLAST of CaUC06G111480 vs. NCBI nr
Match: XP_038874866.1 (uncharacterized protein LOC120067363 [Benincasa hispida])

HSP 1 Score: 351.7 bits (901), Expect = 4.3e-93
Identity = 186/202 (92.08%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDS+TDQI PSSAAGALQLSAAL
Sbjct: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSVTDQISPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGDG 120
           FP+ATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS DSEGRE+DGF GGDFDGPYGGD 
Sbjct: 61  FPIATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSGDSEGREDDGFAGGDFDGPYGGD- 120

Query: 121 GGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180
             G  GGGRGWNFD+FGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR
Sbjct: 121 --GSSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180

Query: 181 FAAEAIGNSERGKLSMRFISVC 203
           FA EA+GNSERGK+SMR ISVC
Sbjct: 181 FATEAMGNSERGKMSMRLISVC 199

[Close]

BLAST of CaUC06G111480 vs. NCBI nr
Match: XP_011657286.1 (uncharacterized protein LOC105435841 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 4.3e-93
Identity = 188/202 (93.07%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS A AL+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGDG 120
           FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGP GGD 
Sbjct: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGD- 120

Query: 121 GGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180
            GGG GGGRGWNFD+FGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR
Sbjct: 121 -GGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180

Query: 181 FAAEAIGNSERGKLSMRFISVC 203
           FAAEAIGNSERGKL+MR ISVC
Sbjct: 181 FAAEAIGNSERGKLAMRLISVC 200

[Close]

BLAST of CaUC06G111480 vs. NCBI nr
Match: XP_008458406.1 (PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo])

HSP 1 Score: 348.2 bits (892), Expect = 4.7e-92
Identity = 187/202 (92.57%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDSITDQIP SS A +L+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGDG 120
           FPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGPYGGD 
Sbjct: 61  FPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPYGGD- 120

Query: 121 GGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180
            GGGGGGGRGWNFD+FGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR
Sbjct: 121 -GGGGGGGRGWNFDRFGGNDWDESSFSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180

Query: 181 FAAEAIGNSERGKLSMRFISVC 203
           FAAEA GNSERGKLSMR ISVC
Sbjct: 181 FAAEAFGNSERGKLSMRLISVC 200

[Close]

BLAST of CaUC06G111480 vs. NCBI nr
Match: XP_022138602.1 (uncharacterized protein LOC111009719 [Momordica charantia])

HSP 1 Score: 340.5 bits (872), Expect = 9.9e-90
Identity = 181/202 (89.60%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MDSSLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+SA+DSIT+QIPPSSAAGALQLSAAL
Sbjct: 1   MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGDG 120
           FPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSEG E+DGFGG +FDG Y    
Sbjct: 61  FPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSEGGEDDGFGGDNFDGSY---- 120

Query: 121 GGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180
           GGGGGG GRGWNFD+FGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVR
Sbjct: 121 GGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180

Query: 181 FAAEAIGNSERGKLSMRFISVC 203
           FAA+AIGNSERGKLSMR ISVC
Sbjct: 181 FAADAIGNSERGKLSMRLISVC 198

[Close]

BLAST of CaUC06G111480 vs. NCBI nr
Match: XP_023548774.1 (uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 3.0e-86
Identity = 178/203 (87.68%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MD+SLVAGTLSMVANNG+GFAKFLNRLD +SNY ISATDSITDQIPPSSAAGALQLSAAL
Sbjct: 1   MDTSLVAGTLSMVANNGVGFAKFLNRLDILSNYSISATDSITDQIPPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDSEGRENDGFGGGDFDGPYGGD 120
           FPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDSEG E++GF GGDFDGPYGGD
Sbjct: 61  FPVATIAPPPVKSISCRSSSRTFLRRKRRTKRRLYSSDDSEGGEDNGFDGGDFDGPYGGD 120

Query: 121 GGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVV 180
              GGGGGGRGWNFD+FGG+DWDESSSSS+S NPAYYFVYEV+CWIALSNCVHFAFKKVV
Sbjct: 121 ---GGGGGGRGWNFDRFGGSDWDESSSSSTSLNPAYYFVYEVICWIALSNCVHFAFKKVV 180

Query: 181 RFAAEAIGNSERGKLSMRFISVC 203
           RFAAEAIGNSER KL  R ISVC
Sbjct: 181 RFAAEAIGNSERVKLFTRLISVC 200

[Close]

BLAST of CaUC06G111480 vs. ExPASy TrEMBL
Match: A0A0A0KG90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318150 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.1e-93
Identity = 188/202 (93.07%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS A AL+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGDG 120
           FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGP GGD 
Sbjct: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGD- 120

Query: 121 GGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180
            GGG GGGRGWNFD+FGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR
Sbjct: 121 -GGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180

Query: 181 FAAEAIGNSERGKLSMRFISVC 203
           FAAEAIGNSERGKL+MR ISVC
Sbjct: 181 FAAEAIGNSERGKLAMRLISVC 200

[Close]

BLAST of CaUC06G111480 vs. ExPASy TrEMBL
Match: A0A1S3C7S8 (uncharacterized protein LOC103497828 OS=Cucumis melo OX=3656 GN=LOC103497828 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.3e-92
Identity = 187/202 (92.57%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDSITDQIP SS A +L+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGDG 120
           FPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGPYGGD 
Sbjct: 61  FPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPYGGD- 120

Query: 121 GGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180
            GGGGGGGRGWNFD+FGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR
Sbjct: 121 -GGGGGGGRGWNFDRFGGNDWDESSFSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180

Query: 181 FAAEAIGNSERGKLSMRFISVC 203
           FAAEA GNSERGKLSMR ISVC
Sbjct: 181 FAAEAFGNSERGKLSMRLISVC 200

[Close]

BLAST of CaUC06G111480 vs. ExPASy TrEMBL
Match: A0A6J1CBL0 (uncharacterized protein LOC111009719 OS=Momordica charantia OX=3673 GN=LOC111009719 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.8e-90
Identity = 181/202 (89.60%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MDSSLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+SA+DSIT+QIPPSSAAGALQLSAAL
Sbjct: 1   MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGDG 120
           FPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSEG E+DGFGG +FDG Y    
Sbjct: 61  FPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSEGGEDDGFGGDNFDGSY---- 120

Query: 121 GGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180
           GGGGGG GRGWNFD+FGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVR
Sbjct: 121 GGGGGGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVR 180

Query: 181 FAAEAIGNSERGKLSMRFISVC 203
           FAA+AIGNSERGKLSMR ISVC
Sbjct: 181 FAADAIGNSERGKLSMRLISVC 198

[Close]

BLAST of CaUC06G111480 vs. ExPASy TrEMBL
Match: A0A6J1KZI4 (uncharacterized protein LOC111499005 OS=Cucurbita maxima OX=3661 GN=LOC111499005 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.5e-86
Identity = 178/203 (87.68%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MD+SLVAGTLS+VANNG+GFAKFLNRLD +SNY ISATDSITDQIPPSSAAGALQLS AL
Sbjct: 1   MDTSLVAGTLSIVANNGVGFAKFLNRLDILSNYSISATDSITDQIPPSSAAGALQLSVAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDSEGRENDGFGGGDFDGPYGGD 120
           FPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDSEG E++GF  GDFDGPYGGD
Sbjct: 61  FPVATIAPPPVKSISCRSSSRTFLRRKRRTKRRLYSSDDSEGGEDNGFDCGDFDGPYGGD 120

Query: 121 GGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVV 180
              GGGGGGRGWNFD+FGGNDWDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVV
Sbjct: 121 ---GGGGGGRGWNFDRFGGNDWDESSSSSTSLNPAYYFVYEVVCWIALSNCVHFAFKKVV 180

Query: 181 RFAAEAIGNSERGKLSMRFISVC 203
           RFAAEAIGNSER KL MR ISVC
Sbjct: 181 RFAAEAIGNSERVKLFMRLISVC 200

[Close]

BLAST of CaUC06G111480 vs. ExPASy TrEMBL
Match: A0A6J1H560 (uncharacterized protein LOC111460236 OS=Cucurbita moschata OX=3662 GN=LOC111460236 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.1e-85
Identity = 176/203 (86.70%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSAAL 60
           MD+SLVAGTLSMVANNG+GFAKFLNRLD +SNY  SATDSITDQIPPSSAAGALQLSAAL
Sbjct: 1   MDTSLVAGTLSMVANNGVGFAKFLNRLDILSNYSFSATDSITDQIPPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS-DDSEGRENDGFGGGDFDGPYGGD 120
           FPVATIAPPPVKS+S RS+SR FLRRKRRTKRRLYS DDSEG E++GF GGDFDGPYGGD
Sbjct: 61  FPVATIAPPPVKSISCRSSSRMFLRRKRRTKRRLYSGDDSEGGEDNGFDGGDFDGPYGGD 120

Query: 121 GGGGGGGGGRGWNFDKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVV 180
              GGGGGGRGWNFD+F G+DWDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVV
Sbjct: 121 ---GGGGGGRGWNFDRFEGSDWDESSSSSTSLNPAYYFVYEVVCWIALSNCVHFAFKKVV 180

Query: 181 RFAAEAIGNSERGKLSMRFISVC 203
           RFAAEAIGNSER KL +R ISVC
Sbjct: 181 RFAAEAIGNSERVKLFLRLISVC 200

[Close]

BLAST of CaUC06G111480 vs. TAIR 10
Match: AT3G06780.1 (glycine-rich protein )

HSP 1 Score: 128.3 bits (321), Expect = 7.2e-30
Identity = 100/215 (46.51%), Postives = 132/215 (61.40%), Query Frame = 0


Query: 1   MDSSLVAGTLSM-VANNGIGFAK-FLNRLDFVSNYCISATDSITDQIPPSSAAGALQLSA 60
           M+ SL+A T+++  A  GI F K  L RLD  ++  IS  DS+ D   P    G +Q SA
Sbjct: 1   MEFSLIADTVTVCTAKQGIAFGKSLLQRLDLANH--ISFADSVVDHQSP--GGGIVQASA 60

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDG-------FGGGD 120
            +FPV  IAPPPV+S SY++  R  +R+KRRT+R  +  D +   + G       FGG  
Sbjct: 61  IIFPVDAIAPPPVRSSSYKTIRR--IRKKRRTRRVSFGGDGDDAGDFGRFLLEGDFGGS- 120

Query: 121 FDGPYGGDGGGGGGGGGRGWNF----DKFGGNDWDESSSSSSSSNPAYYFVYEVVCWIAL 180
            DGP+ G GGGG  GGG+GWN+      FG ++WD  SS SS S+PA  FVYEV+CWIAL
Sbjct: 121 -DGPF-GFGGGGNDGGGKGWNYGGGGGGFGRDNWD-GSSFSSWSDPAMEFVYEVICWIAL 180

Query: 181 SNCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC 203
           SNCVHFAFK++VR     + + ER KL++    VC
Sbjct: 181 SNCVHFAFKRIVRI----VTDGEREKLNIALSPVC 201

The following BLAST results are available for this feature:

BLAST of CaUC06G111480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874866.1	4.3e-93	92.08	uncharacterized protein LOC120067363 [Benincasa hispida]	[more]
XP_011657286.1	4.3e-93	93.07	uncharacterized protein LOC105435841 [Cucumis sativus]	[more]
XP_008458406.1	4.7e-92	92.57	PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo]	[more]
XP_022138602.1	9.9e-90	89.60	uncharacterized protein LOC111009719 [Momordica charantia]	[more]
XP_023548774.1	3.0e-86	87.68	uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC06G111480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G111480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG90	2.1e-93	93.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318150 PE=4 SV=1	[more]
A0A1S3C7S8	2.3e-92	92.57	uncharacterized protein LOC103497828 OS=Cucumis melo OX=3656 GN=LOC103497828 PE=...	[more]
A0A6J1CBL0	4.8e-90	89.60	uncharacterized protein LOC111009719 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1KZI4	5.5e-86	87.68	uncharacterized protein LOC111499005 OS=Cucurbita maxima OX=3661 GN=LOC111499005...	[more]
A0A6J1H560	6.1e-85	86.70	uncharacterized protein LOC111460236 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]

BLAST of CaUC06G111480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06780.1	7.2e-30	46.51	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..129
None	No IPR available	PANTHER	PTHR36751	F3E22.8 PROTEIN	coord: 1..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G111480.1	CaUC06G111480.1	mRNA