CaUC06G111230 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G111230
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description60S ribosomal protein L29
LocationCiama_Chr06: 5604466 .. 5607399 (-)
RNA-Seq ExpressionCaUC06G111230
SyntenyCaUC06G111230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCATCAGCTACAATTTCCCCCCGGTTTCTCTTTAGAAGGAGTTGTGGACCCAAAGACCAAGCCCATTAGAATTCGAAGGCAAGCCCAAATCGAGCTGCCCATAACACCAAATTAGGTCAGAAACCCTAGCATTTCTTCAAATCCCTCTCTTCCTATCGATATCTTCAAATCCCTCTCTTTTCTGTATTCGCTTTTCCGTTCAGAGATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGGTATGTGTTTAACTCAAACAGTTACTTCTGTTCTTGTTCAATCCATTTTTTTTTTCCTTTTTTAATTGTTTTAATTATTTGCTTCGTCGATTTGTCGATTTGTGTTTAGATGGATCCGAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATAACAAGAGTGGGGAAAATGCGTCTGAAGAAGAGTAAACTAGCAATTTTAGGGTTTTTATGTTATAAGTTTTTTCTTAAATTGAATCTTTTGTTATTGCCCTTCTTTTTGTTCAGTTAGTCTTGCTATTTTGACTCAATGTGGAAACCGTTACTACTGAGGCCTGTTTTATGACAATACATTAGATCTGATTTGCATTTTTAAGGCTTGAACTATTGGTTACATCTTCATACATGATCATTTTTGCTATTGATATTATCTTTACTCAGCAAAGACATTATCTTTGTTTCAATGGTGGGTTTAATTACAAATGTTTGTGTATTGTGTTTCTTTGTGTCTTATCTGCTCATCAACTTTCAATTGTGTCTAATAGTACTTGACATGCTACTAATGGATATAACTTAAGAGATCGAATAGATACAAACTTTTGAAGTTTTGGGGACTATACACAAAATTTTACCTAATGGTTTGAATGGTATCAATCTTGCTGCAAAGCATTTGGCTTGTAGATTTAGATTAGATCTCTATGGTGTAATGGGATGAGGGCTTGATTTACTAGGCAACAAGCTTCATAAATTTGACTTGCAGGGGGGGTGTTTGGGCCCCAACCTCAGGTGGGGGTGTGGAGTAGGATGCTTGAAGTGTTTACTATTTTCTACTCATACTTTGCCTCTACACAAACTATCATAACCCAGACTATACTTCAAAATCAACACATACTATTATAGCTCACCTTTGAACTGACTTTTCAATGGGCTTTTAGGATTATTTCTGCTCTTTCATTTGTGCTAGTGGAATATTCTTTTCCTTCTAAATTTGGCTCTTCAATGGAATGTTTCTTGTCTTCTTTGATTATCATTGGAACTAAATGTGAGATCATAGCTATAAGCATGTTAGGCTATGTTATCAGTTTTTTTTTTATGCCTTTGTATCTGAAAAGATGTGTTAAGAAGCTTGAAGATAATGTTCTAAAAGGCTAGATTGTCATATTTCTGGGGTATCGAATTTTCTGTTCACACTAATATTTTTAAGAAGTCCATCTTTCGTTTTATTGTTTTATGTGATCTATATGTTATTGACAAGTTGGTTACAAAGTAAAGGAGGATTAGCTCCACGTAGAATTTGTAAATTGGGTAAGAAAGCACTAATGAGATAATTTGTGACCAATATTCTGCCAGAGCCGAAGTTAGTATGTTATTTTGAAGAAATGTTTAGGGATCAAATAAACATGAATGGCTTAATTTATGGTTTAACAGCATAATTTTACCAAATAAGTGTTCAAGTTCTATTTGTATGCGAGCTTGAAGTGACCACAACTCATCGCCATGGCTATATTTCTTAAATAAAAAAAATAAAACAAATTAAAAACGTCTTTCAAAATGAGTGAACAAGACAAATGGAACATGTCATATGTCAAAATGGGTGGTTAATATGGACAATTGCTCGGTAAAATGTTGTGGGGTTGAACTCAGCATGACCATTTTTTGGAGTCATTATGTCTATATACTAATTATTTTTCTAACACCTCCCACTGTCTTTGAAAAGACGTCTAAATTGTTTTTCCTTACCTAAATTATAGGGAATGGAAATTTAAGAAATCTAATGAGATGTTCGGTAAAGATGTAACCAGGCGAGGGTGGGATTGGGATCGGGATGACTTCCTTCATCTTGCAAAAAAAAAAAAAAAAAAAAATTATAGAAACCCAGAAAAATTATTTGTGTAAGGATCAAGGAGAGAGTTTGCAGGGGTCTAGTCCCCTGTTTATTTTTTTTAAAGAGAAAATCAAGGAAATTGTTTTTTAAAGAAAAACTTTTAATTTGCATGTATTTCAAAATATATTATTGAAGTACATTCGTTCTTACAATTTTGATTAACATTTGGAAATGAGGAAATTAGTTGTGAAATTTCATATACTTTTAAAATGTAACGTAAAATTATTTGCCGTCCTTTTTTTTTAAAAAAAAAAAAAAGGAAGGACCCATAAAGTTATTTGTTGTAAAATGAAGTTTGATTTTTTTAAAAAATGATCTTTTTAAAGTTAATAAATAAACCGATGTTGCACTTGAGCCATTGTTAAAACAGAGATTAGGTAGAGGTGCAAGGAAAAATCAAAATACTGGAAAAAAAAAATTCACTTAAATCGATTGAAACCGCTTTGTCGGGTTAGGTTAAAACCGGTTGATTTGGTAGTTTCGGTTTGAGAATTAAAGAAATTGAAAATTTCGACCTAGTTTGATTTTAGCAAAGACCAAATGAGACTAAATTGAGCCAACCGCTTATTGTTATATATTAAGTTACCCATGTTGTATATGCGGTAGAGTTGACGTTTGAGCGAGTCTGCTGTAAAAGTGAGGTCGCAAATTTGAGTAGAAGCCAGTTCAAAAATATTTTGATTTCTATTAGATATATATCCTCACCCAATTTCATGTTAGACGCACGTCTTCTTTACTTAATGCGTGAACCAGTTTAA

mRNA sequence

GCCATCAGCTACAATTTCCCCCCGGTTTCTCTTTAGAAGGAGTTGTGGACCCAAAGACCAAGCCCATTAGAATTCGAAGGCAAGCCCAAATCGAGCTGCCCATAACACCAAATTAGGTCAGAAACCCTAGCATTTCTTCAAATCCCTCTCTTCCTATCGATATCTTCAAATCCCTCTCTTTTCTGTATTCGCTTTTCCGTTCAGAGATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCGAAGTTCCTTAGGAACCAGAGGGGGGGTGTTTGGGCCCCAACCTCAGGTGGGGGTGTGGAGATTATTTCTGCTCTTTCATTTGTGCTAGTGGAATATTCTTTTCCTTCTAAATTTGGCTCTTCAATGGAATGTTTCTTGTCTTCTTTGATTATCATTGGAACTAAATGTGAGATCATAGCTATAAGCATTTGGTTACAAAGTAAAGGAGGATTAGCTCCACGTAGAATTTGTAAATTGGAGTTGACGTTTGAGCGAGTCTGCTGTAAAAGTGAGGTCGCAAATTTGAGTAGAAGCCAGTTCAAAAATATTTTGATTTCTATTAGATATATATCCTCACCCAATTTCATGTTAGACGCACGTCTTCTTTACTTAATGCGTGAACCAGTTTAA

Coding sequence (CDS)

ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCGAAGTTCCTTAGGAACCAGAGGGGGGGTGTTTGGGCCCCAACCTCAGGTGGGGGTGTGGAGATTATTTCTGCTCTTTCATTTGTGCTAGTGGAATATTCTTTTCCTTCTAAATTTGGCTCTTCAATGGAATGTTTCTTGTCTTCTTTGATTATCATTGGAACTAAATGTGAGATCATAGCTATAAGCATTTGGTTACAAAGTAAAGGAGGATTAGCTCCACGTAGAATTTGTAAATTGGAGTTGACGTTTGAGCGAGTCTGCTGTAAAAGTGAGGTCGCAAATTTGAGTAGAAGCCAGTTCAAAAATATTTTGATTTCTATTAGATATATATCCTCACCCAATTTCATGTTAGACGCACGTCTTCTTTACTTAATGCGTGAACCAGTTTAA

Protein sequence

MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRGGVWAPTSGGGVEIISALSFVLVEYSFPSKFGSSMECFLSSLIIIGTKCEIIAISIWLQSKGGLAPRRICKLELTFERVCCKSEVANLSRSQFKNILISIRYISSPNFMLDARLLYLMREPV
Homology
[Close]
BLAST of CaUC06G111230 vs. NCBI nr
Match: XP_038875325.1 (60S ribosomal protein L29-1-like [Benincasa hispida])

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-14
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. NCBI nr
Match: XP_038875270.1 (60S ribosomal protein L29-1 [Benincasa hispida])

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-14
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. NCBI nr
Match: XP_023000055.1 (60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal protein L29-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 5.6e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. NCBI nr
Match: XP_022930218.1 (60S ribosomal protein L29-1 [Cucurbita moschata] >KAG7026348.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 88.6 bits (218), Expect = 5.6e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. NCBI nr
Match: XP_023514068.1 (60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 5.6e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy Swiss-Prot
Match: Q9M7X7 (60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy Swiss-Prot
Match: Q84WM0 (60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy Swiss-Prot
Match: Q58DW3 (60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 68.9 bits (167), Expect = 6.0e-11
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy Swiss-Prot
Match: P47914 (60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 6.0e-11
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy Swiss-Prot
Match: Q8HXB8 (60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 68.9 bits (167), Expect = 6.0e-11
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy TrEMBL
Match: A0A6J1L4P4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.7e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy TrEMBL
Match: A0A6J1H4N3 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.7e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy TrEMBL
Match: A0A6J1KET9 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.7e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy TrEMBL
Match: A0A6J1KHA4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.7e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. ExPASy TrEMBL
Match: A0A6J1CB13 (60S ribosomal protein L29 OS=Momordica charantia OX=3673 GN=LOC111009591 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.7e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. TAIR 10
Match: AT3G06680.1 (Ribosomal L29e protein family )

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQR
Sbjct: 23 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQR 66

[Close]
BLAST of CaUC06G111230 vs. TAIR 10
Match: AT3G06700.1 (Ribosomal L29e protein family )

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. TAIR 10
Match: AT3G06700.2 (Ribosomal L29e protein family )

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. TAIR 10
Match: AT3G06700.3 (Ribosomal L29e protein family )

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQR 44

[Close]
BLAST of CaUC06G111230 vs. TAIR 10
Match: AT3G06680.2 (Ribosomal L29e protein family )

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQR 45
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQR
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQR 44

The following BLAST results are available for this feature:
BLAST of CaUC06G111230 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875325.12.5e-14100.0060S ribosomal protein L29-1-like [Benincasa hispida][more]
XP_038875270.12.5e-14100.0060S ribosomal protein L29-1 [Benincasa hispida][more]
XP_023000055.15.6e-1497.7360S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal pro... [more]
XP_022930218.15.6e-1497.7360S ribosomal protein L29-1 [Cucurbita moschata] >KAG7026348.1 60S ribosomal pro... [more]
XP_023514068.15.6e-1497.7360S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo][more]
BLAST of CaUC06G111230 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M7X73.1e-1590.9160S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1[more]
Q84WM03.1e-1590.9160S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2[more]
Q58DW36.0e-1177.2760S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3[more]
P479146.0e-1177.2760S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2[more]
Q8HXB86.0e-1177.2760S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3[more]
BLAST of CaUC06G111230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1L4P42.7e-1497.7360S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1[more]
A0A6J1H4N32.7e-1497.7360S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=... [more]
A0A6J1KET92.7e-1497.7360S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1[more]
A0A6J1KHA42.7e-1497.7360S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1[more]
A0A6J1CB132.7e-1497.7360S ribosomal protein L29 OS=Momordica charantia OX=3673 GN=LOC111009591 PE=3 SV... [more]
BLAST of CaUC06G111230 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G06680.12.2e-1690.91Ribosomal L29e protein family [more]
AT3G06700.12.2e-1690.91Ribosomal L29e protein family [more]
AT3G06700.22.2e-1690.91Ribosomal L29e protein family [more]
AT3G06700.32.2e-1690.91Ribosomal L29e protein family [more]
AT3G06680.22.2e-1690.91Ribosomal L29e protein family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002673Ribosomal protein L29ePFAMPF01779Ribosomal_L29ecoord: 3..42
e-value: 3.5E-22
score: 78.4
IPR002673Ribosomal protein L29ePANTHERPTHR1288460S RIBOSOMAL PROTEIN L29coord: 1..44
NoneNo IPR availableGENE3D6.10.140.1730coord: 1..46
e-value: 1.9E-24
score: 87.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR12884:SF3060S RIBOSOMAL PROTEIN L29coord: 1..44

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G111230.1CaUC06G111230.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003735 structural constituent of ribosome