CaUC06G110780 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G110780
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCiama_Chr06: 5089111 .. 5095165 (+)
RNA-Seq ExpressionCaUC06G110780
SyntenyCaUC06G110780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAGAACATTCAACATCAGGAATGGCGAGATCTAAAAGAGAGCTTGGATCGCCATTGTTGTTGTTCGGAAGGTCCGCCTTACAAACCAAATTTGGACATGGATGGATATCTCACTTTCACTGAGCCATAGCCTGCGGGAAATCTACGAGTTTCCAGTTCAAAACAGGAAGGACGGCCCAATAAAAAGAAAGGTTAGAAGTAGGGGTGTGCAAAAACCGAAAAATTACTTAACCGGACCGAACCAACCGATTTTTTGGAAAATGTAGAACCAGTGGTTCACTAAAGAGCATAATCAAACCATTCGGTTCGATCATCTGTTCATTATAGTAAAAAGCTGCAGAAAACCAAACCGAACCAGCCGAGAGATAAGAGTGATTGTAAGAGCGAGAGACTCTCTCGCTCTCGCTCTAACTGAACCATCAGTTAAAAACCGAACCGAACCAATCTGAACTGAATCAAGTTTGTTTGATTCAAGAACCGAAACCGATGAAAATCGGTTTCCAACGGTTCTTCTTCATTGTGAACGGATAACTTCAATTTGGTTCATGGTTCGGCCCAAAACCGGATCGAACCGAACCATGCACACCCCTAGTTAAAAGTAAAACTATAACAAATAAATACATGTTAAAATACCATTTTAGTCCAGTTTGAATTTGAAATATCGATATCGATGGAAATACCGAGGTTCTTGTTTAATAAAAATATTGATATCCATACAAATTTCAAGAAACTTGATGTAAGTTGATGAAAATTATTATAAGTAATTTACGAAACTTTGATTGTGACTTAATTAGACTATAATTAACTATTTTTAATCAATCATTTCTACAAATTAAGACAACATTTAGATTTATATTGTCAATACTTTTGTAAAGAGAGCAAATTTTTTTAAAAAAATAGAAAAATAATTACAATAATATCAAATATTGTTAATTAATTGAAAAATTAAAGGGATGAAATGTTTGCATACAAGATAATGGTAAACTATTAATTATAAAATGTACATGTTTAATACCAAAAAGATGACCTTTGAGCATCTAATTTAGAATCCTGATATATGTTTGTTTTTCTGAATTTTGGTTTCTTGGAAATGAAACCTTTGGATGGTAAAAAAAAAAAAAAACTTACATCGATTCAATTTTGAGGTGAAATGATGTGAAAACTCAATGAAAAAAGTTTGAATGAAATTAAGAAATGGATTATTTTTCAAATATAGCAAAAGAAACTAAAATATTTACAAATATAGCAAAATTTCACTATCTGTCACGGTCTATCATAGATAGACTGTGTATTTTGCTATTAGTTGTAGATATTTTCAACAGTTTTGTCATTTAAGATAATTTCTCTTAAAAAACAGATATATGTTATTCTGCACAATTTTGGTTTCTTAGAAATGAAAGCTCTTGATGGTAAAAAATAAAAAATAAAACTTACATCAATTCAATTTTAAGGTGAAACGATGTGAAATTCAATGATAAATGTTTGGATAAAGTTTTAAATTAAATATATGTTATTTTTCTCAATTTTGGTTTTTTAAAAAATCAAAATTTTGGATGGTAAAAATTTGGGATGTTTTCAAATATAGCAAAATGAACCAAACTATTTACAAATATGGAAAAATTTTATTATCTATCTGCGATTGACAACAATAGACGTCTATCGCTTGAATGATAGATAGCGATAGACTTCTATCACTCAAGAAATAGAAGTCTATCTCAGATAGGTTGTGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAGTAACTTTACTAAAAATTTCAATAGCTAATTGCTATAAAAAAAAAAAATTTGAAATTTCAAGGAATTTCGATTTTCCCTCATTGTCGAAATTTCATCCAAAATTTTACACTATGCCTATATTTTAAAGTTTGTTCAATTTTAGTTATTATATTTTTAATTGTCCAATTTTAGTCTTTATACTTTCAATAAATCTTAAATTTTGTCATGTGTTTATCCTTAATTTTTAAGAAATCTTTTTGTTTTGTTTTAGTACTTTTGCCATAATTTTTCAAAATATTTTCACATATTGTATTTTCTTGTATGAAAAAGATTATTTAATTAATTTTGGTAAAAAATAACTTTCCAGGACTAAATTTAAGATTTATTGAAAATGGATGGACTAGAATTTGGACAATTGAAAAAATAGATACCAAAATTGAACCAACTTCAAAAAAAGATATTTTAACCATAAATAAAGAAACATTTTTTTGTTAGATTTGGGTCTTGTTTTCGATTGGCCCCTAAATTCCCAAATGTTACACTTTTTTTCTTTGGATCATGTATTTCAATTTTTTTATTTTTTTATTTAAGCAATCATTTTACAAATTTATGCATGCGAGGTTTTTAGTTAAGTCATTTTTATTTTAACATTTTCTTATAAAAAAATTTTAAAATAAAAACACTTACATGTCTAACAATTTTTTCTCAAAAGTGTTTTTATATATAATTTTGTTTGATTTCTTACATGATAAAAATGATTTTATTAATGAACTAATCAAAAAAATCGGGAATTTAACGTTTTGATGAAACTTACGTACTTTTGTGTCAACAAATGTATTTTTATTGACAATTTTATATCACAGGCCTAAAAAAAACAAAAGACTTGTGTGGCAAAGCCCAAATTTGTAGTAGTCATAATTTTAAATAGTCAGAGTTGGTGGAGTGGTGCCATCAGAGGTCGCTAGAGTTGGGCGCAAAAAATGGTTGGTGGATGTTGCTTGAGTTGGTCGCAGCTAGTGGTTGTCGAAGGTTGTCACCGAAATTGGACATTGGAGGTGGTCGTCAGACATCGGAAGTGTTCGCTGAAGTTGGTCGTCGAAGGTGGTCGCTAAAGTTGGACGTCGAAGGTGTTTGCCAAAGTTGGCAGTTAGAGGTGGTCGTCGAAGTTAGATGTCACATGTGGTCCTTGGTAGTCGTCGGAGTTGAGTAACAAGGCATCGATGGTGATGAGGGATGATTGCACTATTGGTGAACATGGTATAGAATGTAAGTGACATACGAAGTTAGCCTCCCAAACAATGAGTTGAGTTCATATCTCAATTCATCTTATCTCCTCACCCCAAACACCTCCTAAATTTTGATTTCAAGTTAATTTTTAAATTTTAAAATGTTACAATTTTATAAGATTTGAATTTTTGTTCAATTTCATTTCTAAGTTTCGAGAATTATACTTTTAACCTTTCAATCTAGGACTAAATAAGTATTTTTTTTTTTTTTTTTTGGTTTTAATTATACTCAAATATTTAAAAGTTTCATGAAGTTTAAGCTTTGTCCTAATTTTTAAAACAACCATGAGTAGACTTTTGATGGAAAATTATGTACAGGTTTATCTAATAAAATCTAAGCACATTTATGAAAAATAAATAAAATAGAAACATGGGTAATTGTTTTAAATGATAAAATTGTTGAAAATATTTATAAACATAGCATGTGATAAACAACATTAGACACAGATAGACATCTATCAGTGTTTAAGACAGTAATAGATGATAGTAGCCTATTAGTGATAAACATGTCATTTTGTTATATTTGAAAATAATTCTAAAAACATTGCATCGGTAAATCATGCATTTTGTTGTTTCATTAATGACTTTTTGTAGTTAATTTTAACTCCAAATTAACTTCTCATATACATTTAAATTTGTTCGCTTAAGCAATACAAATACAAAAGTTTTCATCCATTAACAACTTTTATGGTTGTTTTAGAAGAGAAAAAAAATAATAATAATAATTACTTCTAACTTCAAAAATTAAAATGAAAAATGAAAAGCTTGGAATATAAATGATTATCGATATAAAAAACATATTTAATGAGATTATGACTATATGACTCCTTTTAATAAACGTCATGTGTGGATTCAAAAAAAATAAAAAAAAATTGTATAGGTCTAGTAACTAATAGATACAAATTTAAAGTATTTTCTCAATTTTCTTTTATAGATCTTTTAAAAAATATTAACAAATGAACATACTTCAATTAACGCGGGTACATAAGAGGTTCGATTCTCCTATTCCAGCGTTATTGAAAAAAAAAGAAAAATTTTTTGAAAGAAAAATATTTTTTAGTCCCTACTTTCCTTTTATTTTAGGATTTAGTCCCTTTTAAGGAACGAATTTTGTGAGTAAAGAACAGAAAAATCCCACTCACTCATCCACTTCATTTCTCGAAGCTCTTGGGAGGGAACTCCATCTTGTTCCTTGCAGCCAAGCTATGGCTTCCTTCTCCTTCTCCTCGCTCCTTCCTTCTTCAGTTTCTTTCGATCATGGCTCCCCTTCCTTTTTTCCCATCTTTGTTTCATCTTCTTCACACTCCAATTCTCGCATTGTTCGCTGTGCATTTGCAGCCCCCACTAGAAAATTCCCTCCTCCTCCTCCTCCTTCTACTTCTTCTTCATTACCTGCTAAGAAGAAGCACTGGAAGCAAGGGGAATTTCCAGGAATTACAGAGACATCCGCCCCCAGGAAGACCCCTCTCAAGAATGTCAAAAAGAAATTAGACCGCAAGAACAATGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTGTCCGACCATATCACGAATAAACGGTGGCTTCAAGCTCTTGAGGTCGATTTCCCTTCCTTTAATTTCACTTTTCGTGTTAGGTTGATTTATTTGAGATAAAATCGATGTTCGGTTTGTATAATTATGTAATATGCACTGGAATTAGCATTTTTCCATTTATGGACAAAGAGAAGACTACATATTTGGGGATTTCTGGGAGATTCTGTACATTCTCTTCAATTGAATTGGAAACATGAACATTCATCTTCATGCGCCTTAATTTTGAAGGAATGAAGTGATAATTTCAAGAGTGTGTATAGATTTCTTGTGCTATTGTTTTCACCTATAACAACTGTGGCTGCATTAATTCAACCTCCAGGTGTTTGAAATGCTCCGCGAACAGCCGTTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGGAGATCTGGCCAACCACATCGTGCCCGTCTGCTTTTCGACACAATGGTTGAAGAAAGATGTGAACCTACCTCTGAACTTTACACTGCTTTGCTTGCTGCGTATTGTCGGAACAATCTCATTGATGATGCATTCTCCACTCTTAATCTCATGAAGACCCTCCCTGGCTGCCAACCTGATGTGTACACTTATAGTACCTTAATCAAGGCTTGTGTCGATGCTTCTCGCTTTGATATGGTCGAATCATTGTATGAGGAAATGGCCGAACGACTGATAACTCCAAATACAGTGACTCAGAACATAGTCTTAAGTGGATACGGCAAGATAGGGAAGTATGACCAAATGGAGAAAGTTCTTTTAGGAATGCTTGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTTAGCGTGTTTGGTAATAAGGGACAGATTGAAATGATGGAAAAATGGTATGAGAAGTTTCGTAACTTTGGTATCGAGCCAGAAACACGTACATTTAATATTTTGATTGGTGCTTATGGGAAGAAAAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAACTGCAGTTTCCTTGGACGACATCAACGTACAACAATGTGATTGAAGCTTTCGCTGATGTGGGAGATGCAAAGAACATGGAGTACACGTTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGATACCAAGACATTCTGTTGCCTTATAAACGGATATGCAAATGCAGGTCTCTTCCATAAGGTAATTAGCTCAGTTAAGTTGGCAGGAAAATTCGAGATTCCAGAAAATACCTCATTTTATAATGCAGTTATATCTGCATGTGCTAAGGCTGAGGATCTGATGGAAATGGATAGAGTATTTAAGCGAATGAAAGATAAACATTGTCGGCCAGATAGCAAAACATATTCTATTATGATGGAAGCATATGGAAAGGAAGGCATGAATGATAGAGTTCATTACTTGGAGCTGGAAAAGAAACAGGTGATTGATTATGCTTCTAATAACGAGTGA

mRNA sequence

ATGTTGAAGAACATTCAACATCAGGAATGGCGAGATCTAAAAGAGAGCTTGGATCGCCATTGTTGTTGTTCGGAAGGAACGAATTTTGTGAGTAAAGAACAGAAAAATCCCACTCACTCATCCACTTCATTTCTCGAAGCTCTTGGGAGGGAACTCCATCTTGTTCCTTGCAGCCAAGCTATGGCTTCCTTCTCCTTCTCCTCGCTCCTTCCTTCTTCAGTTTCTTTCGATCATGGCTCCCCTTCCTTTTTTCCCATCTTTGTTTCATCTTCTTCACACTCCAATTCTCGCATTGTTCGCTGTGCATTTGCAGCCCCCACTAGAAAATTCCCTCCTCCTCCTCCTCCTTCTACTTCTTCTTCATTACCTGCTAAGAAGAAGCACTGGAAGCAAGGGGAATTTCCAGGAATTACAGAGACATCCGCCCCCAGGAAGACCCCTCTCAAGAATGTCAAAAAGAAATTAGACCGCAAGAACAATGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTGTCCGACCATATCACGAATAAACGGTGGCTTCAAGCTCTTGAGGTGTTTGAAATGCTCCGCGAACAGCCGTTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGGAGATCTGGCCAACCACATCGTGCCCGTCTGCTTTTCGACACAATGGTTGAAGAAAGATGTGAACCTACCTCTGAACTTTACACTGCTTTGCTTGCTGCGTATTGTCGGAACAATCTCATTGATGATGCATTCTCCACTCTTAATCTCATGAAGACCCTCCCTGGCTGCCAACCTGATGTGTACACTTATAGTACCTTAATCAAGGCTTGTGTCGATGCTTCTCGCTTTGATATGGTCGAATCATTGTATGAGGAAATGGCCGAACGACTGATAACTCCAAATACAGTGACTCAGAACATAGTCTTAAGTGGATACGGCAAGATAGGGAAGTATGACCAAATGGAGAAAGTTCTTTTAGGAATGCTTGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTTAGCGTGTTTGGTAATAAGGGACAGATTGAAATGATGGAAAAATGGTATGAGAAGTTTCGTAACTTTGGTATCGAGCCAGAAACACGTACATTTAATATTTTGATTGGTGCTTATGGGAAGAAAAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAACTGCAGTTTCCTTGGACGACATCAACGTACAACAATGTGATTGAAGCTTTCGCTGATGTGGGAGATGCAAAGAACATGGAGTACACGTTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGATACCAAGACATTCTGTTGCCTTATAAACGGATATGCAAATGCAGGTCTCTTCCATAAGGTAATTAGCTCAGTTAAGTTGGCAGGAAAATTCGAGATTCCAGAAAATACCTCATTTTATAATGCAGTTATATCTGCATGTGCTAAGGCTGAGGATCTGATGGAAATGGATAGAGTATTTAAGCGAATGAAAGATAAACATTGTCGGCCAGATAGCAAAACATATTCTATTATGATGGAAGCATATGGAAAGGAAGGCATGAATGATAGAGTTCATTACTTGGAGCTGGAAAAGAAACAGGTGATTGATTATGCTTCTAATAACGAGTGA

Coding sequence (CDS)

ATGTTGAAGAACATTCAACATCAGGAATGGCGAGATCTAAAAGAGAGCTTGGATCGCCATTGTTGTTGTTCGGAAGGAACGAATTTTGTGAGTAAAGAACAGAAAAATCCCACTCACTCATCCACTTCATTTCTCGAAGCTCTTGGGAGGGAACTCCATCTTGTTCCTTGCAGCCAAGCTATGGCTTCCTTCTCCTTCTCCTCGCTCCTTCCTTCTTCAGTTTCTTTCGATCATGGCTCCCCTTCCTTTTTTCCCATCTTTGTTTCATCTTCTTCACACTCCAATTCTCGCATTGTTCGCTGTGCATTTGCAGCCCCCACTAGAAAATTCCCTCCTCCTCCTCCTCCTTCTACTTCTTCTTCATTACCTGCTAAGAAGAAGCACTGGAAGCAAGGGGAATTTCCAGGAATTACAGAGACATCCGCCCCCAGGAAGACCCCTCTCAAGAATGTCAAAAAGAAATTAGACCGCAAGAACAATGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTGTCCGACCATATCACGAATAAACGGTGGCTTCAAGCTCTTGAGGTGTTTGAAATGCTCCGCGAACAGCCGTTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGGAGATCTGGCCAACCACATCGTGCCCGTCTGCTTTTCGACACAATGGTTGAAGAAAGATGTGAACCTACCTCTGAACTTTACACTGCTTTGCTTGCTGCGTATTGTCGGAACAATCTCATTGATGATGCATTCTCCACTCTTAATCTCATGAAGACCCTCCCTGGCTGCCAACCTGATGTGTACACTTATAGTACCTTAATCAAGGCTTGTGTCGATGCTTCTCGCTTTGATATGGTCGAATCATTGTATGAGGAAATGGCCGAACGACTGATAACTCCAAATACAGTGACTCAGAACATAGTCTTAAGTGGATACGGCAAGATAGGGAAGTATGACCAAATGGAGAAAGTTCTTTTAGGAATGCTTGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTTAGCGTGTTTGGTAATAAGGGACAGATTGAAATGATGGAAAAATGGTATGAGAAGTTTCGTAACTTTGGTATCGAGCCAGAAACACGTACATTTAATATTTTGATTGGTGCTTATGGGAAGAAAAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAACTGCAGTTTCCTTGGACGACATCAACGTACAACAATGTGATTGAAGCTTTCGCTGATGTGGGAGATGCAAAGAACATGGAGTACACGTTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGATACCAAGACATTCTGTTGCCTTATAAACGGATATGCAAATGCAGGTCTCTTCCATAAGGTAATTAGCTCAGTTAAGTTGGCAGGAAAATTCGAGATTCCAGAAAATACCTCATTTTATAATGCAGTTATATCTGCATGTGCTAAGGCTGAGGATCTGATGGAAATGGATAGAGTATTTAAGCGAATGAAAGATAAACATTGTCGGCCAGATAGCAAAACATATTCTATTATGATGGAAGCATATGGAAAGGAAGGCATGAATGATAGAGTTCATTACTTGGAGCTGGAAAAGAAACAGGTGATTGATTATGCTTCTAATAACGAGTGA

Protein sequence

MLKNIQHQEWRDLKESLDRHCCCSEGTNFVSKEQKNPTHSSTSFLEALGRELHLVPCSQAMASFSFSSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPPPPPSTSSSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHYLELEKKQVIDYASNNE
Homology
[Close]
BLAST of CaUC06G110780 vs. NCBI nr
Match: XP_038875824.1 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Benincasa hispida])

HSP 1 Score: 950.3 bits (2455), Expect = 7.5e-273
Identity = 474/496 (95.56%), Postives = 483/496 (97.38%), Query Frame = 0 

Query: 61  MASFSF-SSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPPPPPSTS 120
           M SFSF SSLLPSSVSFDHG+  FFPIFVSSSSHSNS IVRCAFAAPTRK    PPPS S
Sbjct: 1   MVSFSFSSSLLPSSVSFDHGATFFFPIFVSSSSHSNSPIVRCAFAAPTRK---SPPPSIS 60

Query: 121 SSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNK 180
           SS PAKKKHWKQGEFPGITETS PRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNK
Sbjct: 61  SSSPAKKKHWKQGEFPGITETSTPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNK 120

Query: 181 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELY 240
           RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRAR LFDTM+EERCEPTSELY
Sbjct: 121 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARSLFDTMLEERCEPTSELY 180

Query: 241 TALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMA 300
           TALLAAYCRNNLID+AFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRF++VESLYEEMA
Sbjct: 181 TALLAAYCRNNLIDEAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFEIVESLYEEMA 240

Query: 301 ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQI 360
           ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLES+TCRPDVWTMNIILSVFGNKGQI
Sbjct: 241 ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESSTCRPDVWTMNIILSVFGNKGQI 300

Query: 361 EMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 420
           EMME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV
Sbjct: 301 EMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 360

Query: 421 IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEI 480
           IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEI
Sbjct: 361 IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEI 420

Query: 481 PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHY 540
           PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHC+PDSKTYSIM+EAYGKEGMNDRVHY
Sbjct: 421 PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYGKEGMNDRVHY 480

Query: 541 LELEKKQVIDYASNNE 556
           LELEKKQVIDYASNNE
Sbjct: 481 LELEKKQVIDYASNNE 493

[Close]
BLAST of CaUC06G110780 vs. NCBI nr
Match: XP_008458291.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis melo])

HSP 1 Score: 924.1 bits (2387), Expect = 5.8e-265
Identity = 466/501 (93.01%), Postives = 479/501 (95.61%), Query Frame = 0 

Query: 61  MASFSF-SSLLPSSVSFDHGSPSFFPIFV-----SSSSHSNSRIVRCAFAAPTRKFPPPP 120
           MASFSF SSLLPSSVSFDH S   FPIFV     SSSSH NSRIVRCAFAAPTRK    P
Sbjct: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSHPNSRIVRCAFAAPTRK---SP 60

Query: 121 PPSTSSSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSD 180
            PSTSSS PAKK+HWKQGEFPGITET   RKTPLKNVKKKLDRKNNAKAWANTVTEALSD
Sbjct: 61  VPSTSSS-PAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSD 120

Query: 181 HITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEP 240
           HI+NKRWL+ALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTM++ERCEP
Sbjct: 121 HISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEP 180

Query: 241 TSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESL 300
           TSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYS LIKACVDASRF++VESL
Sbjct: 181 TSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESL 240

Query: 301 YEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFG 360
           YEEMA+RLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILSVFG
Sbjct: 241 YEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFG 300

Query: 361 NKGQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS 420
           NKGQIEMME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS
Sbjct: 301 NKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS 360

Query: 421 TYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA 480
           TYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA
Sbjct: 361 TYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA 420

Query: 481 GKFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMN 540
           GK EIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHC+PDSKTY+IMMEAYGKEGMN
Sbjct: 421 GKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMN 480

Query: 541 DRVHYLELEKKQVIDYASNNE 556
           DRVHYLELEKK+VIDYASNNE
Sbjct: 481 DRVHYLELEKKEVIDYASNNE 497

[Close]
BLAST of CaUC06G110780 vs. NCBI nr
Match: XP_004138596.2 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis sativus] >KGN45620.2 hypothetical protein Csa_005310 [Cucumis sativus])

HSP 1 Score: 917.9 bits (2371), Expect = 4.1e-263
Identity = 466/509 (91.55%), Postives = 476/509 (93.52%), Query Frame = 0 

Query: 52  LHLVPCSQAMASFSF-SSLLPSSVSFDHGSPSFFPIFV----SSSSHSNSRIVRCAFAAP 111
           L+  PCS  MASFSF SSLLPSSVSFDH S   FPIFV    SSSSH NSRIVRCAFAAP
Sbjct: 2   LYHQPCSLTMASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSCSSSSHPNSRIVRCAFAAP 61

Query: 112 TRKFPPPPPPSTSSSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWAN 171
           TRK    P PSTSSS PAKK+HWKQGEFPG TETS  R+ PLK VKKKLDRKNNAKAWAN
Sbjct: 62  TRK---SPVPSTSSS-PAKKRHWKQGEFPGTTETSTRRRAPLKRVKKKLDRKNNAKAWAN 121

Query: 172 TVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDT 231
           TVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDT
Sbjct: 122 TVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDT 181

Query: 232 MVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDAS 291
           MV+ERCEPT ELYTALLAAYCRNNLIDDAFSTLNLMKTLP CQPDVYTYS LIKACVD S
Sbjct: 182 MVQERCEPTPELYTALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDS 241

Query: 292 RFDMVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTM 351
           RF++VESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTM
Sbjct: 242 RFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTM 301

Query: 352 NIILSVFGNKGQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 411
           NIILSVFGNKG IEMME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK
Sbjct: 302 NIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 361

Query: 412 LQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHK 471
           LQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHK
Sbjct: 362 LQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHK 421

Query: 472 VISSVKLAGKFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMME 531
           VI SVKLAGK EIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHC+PD+KTYSIMME
Sbjct: 422 VIGSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMME 481

Query: 532 AYGKEGMNDRVHYLELEKKQVIDYASNNE 556
           AYGKEGMNDRVHYLELEKKQVID ASNNE
Sbjct: 482 AYGKEGMNDRVHYLELEKKQVIDNASNNE 506

[Close]
BLAST of CaUC06G110780 vs. NCBI nr
Match: XP_022958884.1 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 897.5 bits (2318), Expect = 5.8e-257
Identity = 447/497 (89.94%), Postives = 467/497 (93.96%), Query Frame = 0 

Query: 61  MASFSF-SSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPPP-PPST 120
           MA+FSF SSLLPSSVSFDHGS SFFPI +S S  SNSR VRC FAAP RK PPPP   S+
Sbjct: 1   MAAFSFSSSLLPSSVSFDHGSSSFFPILLSPSFDSNSRAVRCTFAAPARKSPPPPSSSSS 60

Query: 121 SSSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITN 180
           SSS P KKKHWKQGEFPG+TET   RKTPLKNVKKKLDRK NAKAWANTVTEALS+HITN
Sbjct: 61  SSSSPVKKKHWKQGEFPGVTETFDARKTPLKNVKKKLDRKMNAKAWANTVTEALSEHITN 120

Query: 181 KRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSEL 240
           KRW+QALEVFEMLR+QPFYEPKEGTYMKLLVLLGRSGQP RARLLFDTMVEE+CEPT+EL
Sbjct: 121 KRWIQALEVFEMLRKQPFYEPKEGTYMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTEL 180

Query: 241 YTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEM 300
           YTALLAAYCRNNLIDDAFS LNLMKTLP CQPD+YTYS LIKACVD+SRF++VESLYEEM
Sbjct: 181 YTALLAAYCRNNLIDDAFSLLNLMKTLPCCQPDIYTYSILIKACVDSSRFELVESLYEEM 240

Query: 301 AERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQ 360
           AERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQ
Sbjct: 241 AERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQ 300

Query: 361 IEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 420
           IEMME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN
Sbjct: 301 IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 360

Query: 421 VIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFE 480
           VIEAFADVGDAKNMEYTF QMRAEGM+ADTKTFCCLINGY+NAGLFHKVI SVKLAGK E
Sbjct: 361 VIEAFADVGDAKNMEYTFTQMRAEGMKADTKTFCCLINGYSNAGLFHKVIGSVKLAGKCE 420

Query: 481 IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVH 540
           IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHC+PDSKTYSIM+EAY KE MNDRVH
Sbjct: 421 IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVH 480

Query: 541 YLELEKKQVIDYASNNE 556
           YLELE+KQVID+A  NE
Sbjct: 481 YLELERKQVIDHAPTNE 497

[Close]
BLAST of CaUC06G110780 vs. NCBI nr
Match: XP_023547739.1 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 887.9 bits (2293), Expect = 4.6e-254
Identity = 450/534 (84.27%), Postives = 471/534 (88.20%), Query Frame = 0 

Query: 61  MASFSF---SSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPPPPPS 120
           MA+FSF   SSLLPSSVSFDHGS SFFPI +SSS  SNSR+VRC FAAP RK  PPPP S
Sbjct: 1   MAAFSFSFSSSLLPSSVSFDHGSSSFFPILISSSFDSNSRVVRCTFAAPARK-SPPPPSS 60

Query: 121 TSSSLPAKKKHWKQGEFPGITETSAP---------------------------------- 180
           +SSS P KK+HWKQGEFPGITETSAP                                  
Sbjct: 61  SSSSSPDKKRHWKQGEFPGITETSAPRMTPARKSPPPSSSSPVKKKHWKQGEFPGVTERF 120

Query: 181 --RKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKE 240
             RKTPLKNVKKKLDRK NAKAWANTVTE LS+HITNKRW+QALEVFEMLR+QPFYEPKE
Sbjct: 121 DARKTPLKNVKKKLDRKMNAKAWANTVTETLSEHITNKRWIQALEVFEMLRKQPFYEPKE 180

Query: 241 GTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNL 300
           GTYMKLLVLLGRSGQP RARLLFDTMVEE+CEPT+ELYTALLAAYCRNNLIDDAFS LNL
Sbjct: 181 GTYMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTELYTALLAAYCRNNLIDDAFSILNL 240

Query: 301 MKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMAERLITPNTVTQNIVLSGYGKIG 360
           MKTLP CQPD+YTYS LIKACVD+SRF++VESLYEEMAERLITPNTVTQNIVLSGYGKIG
Sbjct: 241 MKTLPCCQPDIYTYSILIKACVDSSRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIG 300

Query: 361 KYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMEKWYEKFRNFGIEPETRTF 420
           KYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMME+WYEKFRNFGIEPETRTF
Sbjct: 301 KYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTF 360

Query: 421 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRA 480
           NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTF QMRA
Sbjct: 361 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFTQMRA 420

Query: 481 EGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENTSFYNAVISACAKAEDLME 540
           EGM+ADTKTFCCLINGY+NAGLFHKVI SVKLAGK EIPENTSFYNAVISACAKAEDLME
Sbjct: 421 EGMKADTKTFCCLINGYSNAGLFHKVIGSVKLAGKCEIPENTSFYNAVISACAKAEDLME 480

Query: 541 MDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHYLELEKKQVIDYASNNE 556
           MDRVFKRMKDKHC+PDSKTYSIM+EAY KE MNDRVHYLELE+KQVID+A  NE
Sbjct: 481 MDRVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVHYLELERKQVIDHAPTNE 533

[Close]
BLAST of CaUC06G110780 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 8.8e-200
Identity = 350/490 (71.43%), Postives = 405/490 (82.65%), Query Frame = 0 

Query: 60  AMASFSFSSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPPPPPSTS 119
           A  S SFSS L SS     G   F         H +  IVRC  AA            +S
Sbjct: 2   ASMSLSFSSSLCSS-RIPEGKRRF--------RHRDVGIVRCVLAA----------SKSS 61

Query: 120 SSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNK 179
                KK+ WK GEFPGITE    R+TP+KNVKKKLDR++ A  W NTVTE LSD I  K
Sbjct: 62  PGSVTKKRLWKDGEFPGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKK 121

Query: 180 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELY 239
           +WLQALEVF+MLREQ FY+PKEGTYMKLLVLLG+SGQP+RA+ LFD M+EE  EPT ELY
Sbjct: 122 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 181

Query: 240 TALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMA 299
           TALLAAY R+NLIDDAFS L+ MK+ P CQPDV+TYSTL+KACVDAS+FD+V+SLY+EM 
Sbjct: 182 TALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMD 241

Query: 300 ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQI 359
           ERLITPNTVTQNIVLSGYG++G++DQMEKVL  ML ST C+PDVWTMNIILSVFGN G+I
Sbjct: 242 ERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKI 301

Query: 360 EMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 419
           +MME WYEKFRNFGIEPETRTFNILIG+YGKKRMYDKMSSVMEYMRKL+FPWTTSTYNN+
Sbjct: 302 DMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNI 361

Query: 420 IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEI 479
           IEAFADVGDAKNME TF+QMR+EGM+ADTKTFCCLINGYANAGLFHKVISSV+LA KFEI
Sbjct: 362 IEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEI 421

Query: 480 PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHY 539
           PENT+FYNAVISACAKA+DL+EM+RV+ RMK++ C  DS+T+ IM+EAY KEGMND+++Y
Sbjct: 422 PENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYY 472

Query: 540 LELEKKQVID 550
           LE E+++++D
Sbjct: 482 LEQERQKLMD 472

[Close]
BLAST of CaUC06G110780 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 328.9 bits (842), Expect = 1.1e-88
Identity = 171/397 (43.07%), Postives = 235/397 (59.19%), Query Frame = 0 

Query: 144 RKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGT 203
           R+   K++ +K  +K + K    TV E+L + IT  RW  A++VFE+LREQ +Y+P  G 
Sbjct: 95  RREATKSIIEK--KKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGI 154

Query: 204 YMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMK 263
           Y+KL+V+LG+  QP +A  LF  M+ E C    E+YTAL++AY R+   D AF+ L  MK
Sbjct: 155 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 214

Query: 264 TLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMAERLITPNTVTQNIVLSGYGKIGKY 323
           +   CQPDV+TYS LIK+ +    FD V+ L  +M  + I PNT+T N ++  YGK   +
Sbjct: 215 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 274

Query: 324 DQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMEKWYEKFRNFGIEPETRTFNI 383
            +ME  L+ ML    C+PD WTMN  L  FG  GQIEMME  YEKF++ GIEP  RTFNI
Sbjct: 275 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 334

Query: 384 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEG 443
           L+ +YGK   Y KMS+VMEYM+K  + WT  TYN VI+AF   GD K MEY F  M++E 
Sbjct: 335 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSER 394

Query: 444 MRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENTSFYNAVISACAKAEDLMEMD 503
           +     T C L+  Y  A    K+   ++     +I  +  F+N ++ A  + E   EM 
Sbjct: 395 IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMK 454

Query: 504 RVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHYL 541
            V + M+ K  +PD  TY  M++AY   GM   V  L
Sbjct: 455 GVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

[Close]
BLAST of CaUC06G110780 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.1e-88
Identity = 160/406 (39.41%), Postives = 252/406 (62.07%), Query Frame = 0 

Query: 148 LKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKL 207
           +K +++K + +     W   V EAL + I   RW  AL++F +LR+Q +YEP+  TY KL
Sbjct: 41  VKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKL 100

Query: 208 LVLLGRSGQPHRARLLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPG 267
             +LG   QP +A LLF+ M+ E  +PT ++YT+L++ Y ++ L+D AFSTL  MK++  
Sbjct: 101 FKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSD 160

Query: 268 CQPDVYTYSTLIKACVDASRFDMVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQME 327
           C+PDV+T++ LI  C    RFD+V+S+  EM+   +  +TVT N ++ GYGK G +++ME
Sbjct: 161 CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEME 220

Query: 328 KVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMEKWYEKFRNFGIEPETRTFNILIGA 387
            VL  M+E     PDV T+N I+  +GN   +  ME WY +F+  G++P+  TFNILI +
Sbjct: 221 SVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILS 280

Query: 388 YGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRAD 447
           +GK  MY KM SVM++M K  F  TT TYN VIE F   G  + M+  F +M+ +G++ +
Sbjct: 281 FGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 340

Query: 448 TKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENTSFYNAVISACAKAEDLMEMDRVFK 507
           + T+C L+N Y+ AGL  K+ S ++     ++  +T F+N +I+A  +A DL  M  ++ 
Sbjct: 341 SITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYI 400

Query: 508 RMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHYLELEKKQVIDYASN 554
           +M+++ C+PD  T++ M++ Y   G+ D V  LE   KQ+I    N
Sbjct: 401 QMEERKCKPDKITFATMIKTYTAHGIFDAVQELE---KQMISSGEN 443

[Close]
BLAST of CaUC06G110780 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.1e-44
Identity = 101/354 (28.53%), Postives = 173/354 (48.87%), Query Frame = 0 

Query: 180 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELY 239
           +WLQ LEVF  +++Q +Y P  G Y KL+ ++G+ GQ   A  LF  M    C P + +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 240 TALLAAYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLY 299
            AL+ A+     +   ++     L+ MK +  CQP+V TY+ L++A   + + D V +L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 300 EEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGN 359
           +++    ++P+  T N V+  YGK G   +ME VL  M  S  C+PD+ T N+++  +G 
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 291

Query: 360 KGQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 419
           K + E ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  T
Sbjct: 292 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 351

Query: 420 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 479
           Y  +I  +   G        FE++          T   ++  Y   GL+ +       A 
Sbjct: 352 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 411

Query: 480 KFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYG 530
            F +  + S Y  +  A  KA+   ++  + K+M+     P+ + +   +E +G
Sbjct: 412 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464

[Close]
BLAST of CaUC06G110780 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.1e-44
Identity = 106/360 (29.44%), Postives = 175/360 (48.61%), Query Frame = 0 

Query: 181 WLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELYT 240
           WLQ L+VF  +++Q +Y    G Y KL+ ++GR GQ   A  LF  M    C+P + +Y 
Sbjct: 104 WLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYN 163

Query: 241 ALLAAYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYE 300
           +L+ A+     +   +  A      MK +  CQP + TY+ L++A   A     V+ L++
Sbjct: 164 SLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFK 223

Query: 301 EMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNK 360
           ++ E +++P+  T N VL  YGK G   +ME VL+ M +ST CRPDV T NI++  +G K
Sbjct: 224 DLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRM-KSTQCRPDVITFNILIDSYGRK 283

Query: 361 GQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 420
              + ME+ ++        P   TFN +I  YG+ R+ +K  SV+E M +L F     T 
Sbjct: 284 QTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQ 343

Query: 421 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK 480
             +I  +A           F+++     +    +   ++  Y   GL  +    +  A +
Sbjct: 344 ECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQ 403

Query: 481 FEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDR 537
             +  N S Y  +  A  KA D + + ++ KRM  +   P+ K +   +EA+G      R
Sbjct: 404 QCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKFFLDALEAFGTSDRKPR 462

[Close]
BLAST of CaUC06G110780 vs. ExPASy TrEMBL
Match: A0A1S3C7L9 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497754 PE=4 SV=1)

HSP 1 Score: 924.1 bits (2387), Expect = 2.8e-265
Identity = 466/501 (93.01%), Postives = 479/501 (95.61%), Query Frame = 0 

Query: 61  MASFSF-SSLLPSSVSFDHGSPSFFPIFV-----SSSSHSNSRIVRCAFAAPTRKFPPPP 120
           MASFSF SSLLPSSVSFDH S   FPIFV     SSSSH NSRIVRCAFAAPTRK    P
Sbjct: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSHPNSRIVRCAFAAPTRK---SP 60

Query: 121 PPSTSSSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSD 180
            PSTSSS PAKK+HWKQGEFPGITET   RKTPLKNVKKKLDRKNNAKAWANTVTEALSD
Sbjct: 61  VPSTSSS-PAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSD 120

Query: 181 HITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEP 240
           HI+NKRWL+ALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTM++ERCEP
Sbjct: 121 HISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEP 180

Query: 241 TSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESL 300
           TSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYS LIKACVDASRF++VESL
Sbjct: 181 TSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESL 240

Query: 301 YEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFG 360
           YEEMA+RLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILSVFG
Sbjct: 241 YEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFG 300

Query: 361 NKGQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS 420
           NKGQIEMME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS
Sbjct: 301 NKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS 360

Query: 421 TYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA 480
           TYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA
Sbjct: 361 TYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA 420

Query: 481 GKFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMN 540
           GK EIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHC+PDSKTY+IMMEAYGKEGMN
Sbjct: 421 GKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMN 480

Query: 541 DRVHYLELEKKQVIDYASNNE 556
           DRVHYLELEKK+VIDYASNNE
Sbjct: 481 DRVHYLELEKKEVIDYASNNE 497

[Close]
BLAST of CaUC06G110780 vs. ExPASy TrEMBL
Match: A0A0A0K7C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000680 PE=4 SV=1)

HSP 1 Score: 911.0 bits (2353), Expect = 2.4e-261
Identity = 462/500 (92.40%), Postives = 471/500 (94.20%), Query Frame = 0 

Query: 61  MASFSF-SSLLPSSVSFDHGSPSFFPIFV----SSSSHSNSRIVRCAFAAPTRKFPPPPP 120
           MASFSF SSLLPSSVSFDH S   FPIFV    SSSSH NSRIVRCAFAAPTRK    P 
Sbjct: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSCSSSSHPNSRIVRCAFAAPTRK---SPV 60

Query: 121 PSTSSSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDH 180
           PSTSSS PAKK+HWKQGEFPG TETS  R+ PLK VKKKLDRKNNAKAWANTVTEALSDH
Sbjct: 61  PSTSSS-PAKKRHWKQGEFPGTTETSTRRRAPLKRVKKKLDRKNNAKAWANTVTEALSDH 120

Query: 181 ITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPT 240
           ITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMV+ERCEPT
Sbjct: 121 ITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVQERCEPT 180

Query: 241 SELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLY 300
            ELYTALLAAYCRNNLIDDAFSTLNLMKTLP CQPDVYTYS LIKACVD SRF++VESLY
Sbjct: 181 PELYTALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLY 240

Query: 301 EEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGN 360
           EEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILSVFGN
Sbjct: 241 EEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGN 300

Query: 361 KGQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 420
           KG IEMME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST
Sbjct: 301 KGHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 360

Query: 421 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 480
           YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI SVKLAG
Sbjct: 361 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAG 420

Query: 481 KFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMND 540
           K EIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHC+PD+KTYSIMMEAYGKEGMND
Sbjct: 421 KLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMND 480

Query: 541 RVHYLELEKKQVIDYASNNE 556
           RVHYLELEKKQVID ASNNE
Sbjct: 481 RVHYLELEKKQVIDNASNNE 496

[Close]
BLAST of CaUC06G110780 vs. ExPASy TrEMBL
Match: A0A6J1H6E5 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460035 PE=4 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 2.8e-257
Identity = 447/497 (89.94%), Postives = 467/497 (93.96%), Query Frame = 0 

Query: 61  MASFSF-SSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPPP-PPST 120
           MA+FSF SSLLPSSVSFDHGS SFFPI +S S  SNSR VRC FAAP RK PPPP   S+
Sbjct: 1   MAAFSFSSSLLPSSVSFDHGSSSFFPILLSPSFDSNSRAVRCTFAAPARKSPPPPSSSSS 60

Query: 121 SSSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITN 180
           SSS P KKKHWKQGEFPG+TET   RKTPLKNVKKKLDRK NAKAWANTVTEALS+HITN
Sbjct: 61  SSSSPVKKKHWKQGEFPGVTETFDARKTPLKNVKKKLDRKMNAKAWANTVTEALSEHITN 120

Query: 181 KRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSEL 240
           KRW+QALEVFEMLR+QPFYEPKEGTYMKLLVLLGRSGQP RARLLFDTMVEE+CEPT+EL
Sbjct: 121 KRWIQALEVFEMLRKQPFYEPKEGTYMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTEL 180

Query: 241 YTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEM 300
           YTALLAAYCRNNLIDDAFS LNLMKTLP CQPD+YTYS LIKACVD+SRF++VESLYEEM
Sbjct: 181 YTALLAAYCRNNLIDDAFSLLNLMKTLPCCQPDIYTYSILIKACVDSSRFELVESLYEEM 240

Query: 301 AERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQ 360
           AERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQ
Sbjct: 241 AERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQ 300

Query: 361 IEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 420
           IEMME+WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN
Sbjct: 301 IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 360

Query: 421 VIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFE 480
           VIEAFADVGDAKNMEYTF QMRAEGM+ADTKTFCCLINGY+NAGLFHKVI SVKLAGK E
Sbjct: 361 VIEAFADVGDAKNMEYTFTQMRAEGMKADTKTFCCLINGYSNAGLFHKVIGSVKLAGKCE 420

Query: 481 IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVH 540
           IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHC+PDSKTYSIM+EAY KE MNDRVH
Sbjct: 421 IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVH 480

Query: 541 YLELEKKQVIDYASNNE 556
           YLELE+KQVID+A  NE
Sbjct: 481 YLELERKQVIDHAPTNE 497

[Close]
BLAST of CaUC06G110780 vs. ExPASy TrEMBL
Match: A0A6J1H324 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460035 PE=4 SV=1)

HSP 1 Score: 885.9 bits (2288), Expect = 8.4e-254
Identity = 450/532 (84.59%), Postives = 470/532 (88.35%), Query Frame = 0 

Query: 61  MASFSF-SSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPPPPPSTS 120
           MA+FSF SSLLPSSVSFDHGS SFFPI +S S  SNSR VRC FAAP RK  PPPP S+S
Sbjct: 1   MAAFSFSSSLLPSSVSFDHGSSSFFPILLSPSFDSNSRAVRCTFAAPARK-SPPPPSSSS 60

Query: 121 SSLPAKKKHWKQGEFPGITETSAP------------------------------------ 180
           SS P KK+HWKQGEFPGITETSAP                                    
Sbjct: 61  SSSPDKKRHWKQGEFPGITETSAPRMNPARKSPPPSSSSPVKKKHWKQGEFPGVTETFDA 120

Query: 181 RKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGT 240
           RKTPLKNVKKKLDRK NAKAWANTVTEALS+HITNKRW+QALEVFEMLR+QPFYEPKEGT
Sbjct: 121 RKTPLKNVKKKLDRKMNAKAWANTVTEALSEHITNKRWIQALEVFEMLRKQPFYEPKEGT 180

Query: 241 YMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMK 300
           YMKLLVLLGRSGQP RARLLFDTMVEE+CEPT+ELYTALLAAYCRNNLIDDAFS LNLMK
Sbjct: 181 YMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTELYTALLAAYCRNNLIDDAFSLLNLMK 240

Query: 301 TLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMAERLITPNTVTQNIVLSGYGKIGKY 360
           TLP CQPD+YTYS LIKACVD+SRF++VESLYEEMAERLITPNTVTQNIVLSGYGKIGKY
Sbjct: 241 TLPCCQPDIYTYSILIKACVDSSRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIGKY 300

Query: 361 DQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMEKWYEKFRNFGIEPETRTFNI 420
           DQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMME+WYEKFRNFGIEPETRTFNI
Sbjct: 301 DQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNI 360

Query: 421 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEG 480
           LIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTF QMRAEG
Sbjct: 361 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFTQMRAEG 420

Query: 481 MRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENTSFYNAVISACAKAEDLMEMD 540
           M+ADTKTFCCLINGY+NAGLFHKVI SVKLAGK EIPENTSFYNAVISACAKAEDLMEMD
Sbjct: 421 MKADTKTFCCLINGYSNAGLFHKVIGSVKLAGKCEIPENTSFYNAVISACAKAEDLMEMD 480

Query: 541 RVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHYLELEKKQVIDYASNNE 556
           RVFKRMKDKHC+PDSKTYSIM+EAY KE MNDRVHYLELE+KQVID+A  NE
Sbjct: 481 RVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVHYLELERKQVIDHAPTNE 531

[Close]
BLAST of CaUC06G110780 vs. ExPASy TrEMBL
Match: A0A6J1L0G6 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499248 PE=4 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 5.5e-253
Identity = 448/537 (83.43%), Postives = 470/537 (87.52%), Query Frame = 0 

Query: 61  MASFSF---SSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPP---- 120
           MA+FSF   SSLLPSSVSFDHGS SFFPI +SSS  SNSR+VRC FAAP RK PPP    
Sbjct: 1   MAAFSFSFSSSLLPSSVSFDHGSSSFFPILLSSSFDSNSRVVRCTFAAPARKSPPPSSSS 60

Query: 121 -----------------------------------PPPSTSSSLPAKKKHWKQGEFPGIT 180
                                              PPP +SS  P KKKHWKQGEFPG+T
Sbjct: 61  SSSSSSPDKKRHWKQGEFPGIIETSAPRMTPARKSPPPFSSS--PVKKKHWKQGEFPGVT 120

Query: 181 ETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYE 240
           ET   RKTPLKNVKKKLDRK NAKAWANTVTEALS+HITNKRW+QALEVFEMLR+QPFYE
Sbjct: 121 ETFDARKTPLKNVKKKLDRKMNAKAWANTVTEALSEHITNKRWIQALEVFEMLRKQPFYE 180

Query: 241 PKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFST 300
           PKEGTYMKLLVLLGRSGQP RARLLFDTMVEE+CEPT+ELYTALLAAYCRNNLIDDAFS 
Sbjct: 181 PKEGTYMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTELYTALLAAYCRNNLIDDAFSI 240

Query: 301 LNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMAERLITPNTVTQNIVLSGYG 360
           LNLMKTLP CQPD+YTYS LIKACVD+SRF++VESLYEEMAERLITPNTVTQNIVLSGYG
Sbjct: 241 LNLMKTLPCCQPDIYTYSILIKACVDSSRFELVESLYEEMAERLITPNTVTQNIVLSGYG 300

Query: 361 KIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMEKWYEKFRNFGIEPET 420
           KIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMME+WYEKFRNFGIEPET
Sbjct: 301 KIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPET 360

Query: 421 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQ 480
           RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTF Q
Sbjct: 361 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFTQ 420

Query: 481 MRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENTSFYNAVISACAKAED 540
           MRAEGM+ADTKTFCCLINGY+NAGLFHKVISSVKLAGK EIPENTSFYNAVISACAKAED
Sbjct: 421 MRAEGMKADTKTFCCLINGYSNAGLFHKVISSVKLAGKCEIPENTSFYNAVISACAKAED 480

Query: 541 LMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHYLELEKKQVIDYASNNE 556
           LMEMDRVFKRMKDKHC+PDSKTYSIM+EAY KE MNDRVHYL+LE+KQVID+A  NE
Sbjct: 481 LMEMDRVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVHYLKLERKQVIDHAPTNE 535

[Close]
BLAST of CaUC06G110780 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 698.0 bits (1800), Expect = 6.3e-201
Identity = 350/490 (71.43%), Postives = 405/490 (82.65%), Query Frame = 0 

Query: 60  AMASFSFSSLLPSSVSFDHGSPSFFPIFVSSSSHSNSRIVRCAFAAPTRKFPPPPPPSTS 119
           A  S SFSS L SS     G   F         H +  IVRC  AA            +S
Sbjct: 2   ASMSLSFSSSLCSS-RIPEGKRRF--------RHRDVGIVRCVLAA----------SKSS 61

Query: 120 SSLPAKKKHWKQGEFPGITETSAPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNK 179
                KK+ WK GEFPGITE    R+TP+KNVKKKLDR++ A  W NTVTE LSD I  K
Sbjct: 62  PGSVTKKRLWKDGEFPGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKK 121

Query: 180 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELY 239
           +WLQALEVF+MLREQ FY+PKEGTYMKLLVLLG+SGQP+RA+ LFD M+EE  EPT ELY
Sbjct: 122 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 181

Query: 240 TALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMA 299
           TALLAAY R+NLIDDAFS L+ MK+ P CQPDV+TYSTL+KACVDAS+FD+V+SLY+EM 
Sbjct: 182 TALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMD 241

Query: 300 ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQI 359
           ERLITPNTVTQNIVLSGYG++G++DQMEKVL  ML ST C+PDVWTMNIILSVFGN G+I
Sbjct: 242 ERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKI 301

Query: 360 EMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 419
           +MME WYEKFRNFGIEPETRTFNILIG+YGKKRMYDKMSSVMEYMRKL+FPWTTSTYNN+
Sbjct: 302 DMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNI 361

Query: 420 IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEI 479
           IEAFADVGDAKNME TF+QMR+EGM+ADTKTFCCLINGYANAGLFHKVISSV+LA KFEI
Sbjct: 362 IEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEI 421

Query: 480 PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHY 539
           PENT+FYNAVISACAKA+DL+EM+RV+ RMK++ C  DS+T+ IM+EAY KEGMND+++Y
Sbjct: 422 PENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYY 472

Query: 540 LELEKKQVID 550
           LE E+++++D
Sbjct: 482 LEQERQKLMD 472

[Close]
BLAST of CaUC06G110780 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 328.9 bits (842), Expect = 7.6e-90
Identity = 171/397 (43.07%), Postives = 235/397 (59.19%), Query Frame = 0 

Query: 144 RKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGT 203
           R+   K++ +K  +K + K    TV E+L + IT  RW  A++VFE+LREQ +Y+P  G 
Sbjct: 95  RREATKSIIEK--KKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGI 154

Query: 204 YMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMK 263
           Y+KL+V+LG+  QP +A  LF  M+ E C    E+YTAL++AY R+   D AF+ L  MK
Sbjct: 155 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 214

Query: 264 TLPGCQPDVYTYSTLIKACVDASRFDMVESLYEEMAERLITPNTVTQNIVLSGYGKIGKY 323
           +   CQPDV+TYS LIK+ +    FD V+ L  +M  + I PNT+T N ++  YGK   +
Sbjct: 215 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 274

Query: 324 DQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMEKWYEKFRNFGIEPETRTFNI 383
            +ME  L+ ML    C+PD WTMN  L  FG  GQIEMME  YEKF++ GIEP  RTFNI
Sbjct: 275 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 334

Query: 384 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEG 443
           L+ +YGK   Y KMS+VMEYM+K  + WT  TYN VI+AF   GD K MEY F  M++E 
Sbjct: 335 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSER 394

Query: 444 MRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENTSFYNAVISACAKAEDLMEMD 503
           +     T C L+  Y  A    K+   ++     +I  +  F+N ++ A  + E   EM 
Sbjct: 395 IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMK 454

Query: 504 RVFKRMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHYL 541
            V + M+ K  +PD  TY  M++AY   GM   V  L
Sbjct: 455 GVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

[Close]
BLAST of CaUC06G110780 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 325.9 bits (834), Expect = 6.5e-89
Identity = 158/400 (39.50%), Postives = 251/400 (62.75%), Query Frame = 0 

Query: 148 LKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKL 207
           +K +++K + +     W   V EAL + I   RW  AL++F +LR+Q +YEP+  TY KL
Sbjct: 91  VKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKL 150

Query: 208 LVLLGRSGQPHRARLLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPG 267
             +LG   QP +A LLF+ M+ E  +PT ++YT+L++ Y ++ L+D AFSTL  MK++  
Sbjct: 151 FKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSD 210

Query: 268 CQPDVYTYSTLIKACVDASRFDMVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQME 327
           C+PDV+T++ LI  C    RFD+V+S+  EM+   +  +TVT N ++ GYGK G +++ME
Sbjct: 211 CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEME 270

Query: 328 KVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMEKWYEKFRNFGIEPETRTFNILIGA 387
            VL  M+E     PDV T+N I+  +GN   +  ME WY +F+  G++P+  TFNILI +
Sbjct: 271 SVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILS 330

Query: 388 YGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRAD 447
           +GK  MY KM SVM++M K  F  TT TYN VIE F   G  + M+  F +M+ +G++ +
Sbjct: 331 FGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 390

Query: 448 TKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENTSFYNAVISACAKAEDLMEMDRVFK 507
           + T+C L+N Y+ AGL  K+ S ++     ++  +T F+N +I+A  +A DL  M  ++ 
Sbjct: 391 SITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYI 450

Query: 508 RMKDKHCRPDSKTYSIMMEAYGKEGMNDRVHYLELEKKQV 548
           +M+++ C+PD  T++ M++ Y   G+ D V   ELEK+ +
Sbjct: 451 QMEERKCKPDKITFATMIKTYTAHGIFDAVQ--ELEKQMI 488

[Close]
BLAST of CaUC06G110780 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-45
Identity = 101/354 (28.53%), Postives = 173/354 (48.87%), Query Frame = 0 

Query: 180 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELY 239
           +WLQ LEVF  +++Q +Y P  G Y KL+ ++G+ GQ   A  LF  M    C P + +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 240 TALLAAYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLY 299
            AL+ A+     +   ++     L+ MK +  CQP+V TY+ L++A   + + D V +L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 300 EEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGN 359
           +++    ++P+  T N V+  YGK G   +ME VL  M  S  C+PD+ T N+++  +G 
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 291

Query: 360 KGQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 419
           K + E ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  T
Sbjct: 292 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 351

Query: 420 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 479
           Y  +I  +   G        FE++          T   ++  Y   GL+ +       A 
Sbjct: 352 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 411

Query: 480 KFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYG 530
            F +  + S Y  +  A  KA+   ++  + K+M+     P+ + +   +E +G
Sbjct: 412 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464

[Close]
BLAST of CaUC06G110780 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-45
Identity = 101/354 (28.53%), Postives = 173/354 (48.87%), Query Frame = 0 

Query: 180 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVEERCEPTSELY 239
           +WLQ LEVF  +++Q +Y P  G Y KL+ ++G+ GQ   A  LF  M    C P + +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 240 TALLAAYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFDMVESLY 299
            AL+ A+     +   ++     L+ MK +  CQP+V TY+ L++A   + + D V +L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 300 EEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGN 359
           +++    ++P+  T N V+  YGK G   +ME VL  M  S  C+PD+ T N+++  +G 
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 291

Query: 360 KGQIEMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 419
           K + E ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  T
Sbjct: 292 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 351

Query: 420 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 479
           Y  +I  +   G        FE++          T   ++  Y   GL+ +       A 
Sbjct: 352 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 411

Query: 480 KFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCRPDSKTYSIMMEAYG 530
            F +  + S Y  +  A  KA+   ++  + K+M+     P+ + +   +E +G
Sbjct: 412 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464

The following BLAST results are available for this feature:
BLAST of CaUC06G110780 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875824.17.5e-27395.56pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Benincasa ... [more]
XP_008458291.15.8e-26593.01PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic ... [more]
XP_004138596.24.1e-26391.55pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis sa... [more]
XP_022958884.15.8e-25789.94pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isofor... [more]
XP_023547739.14.6e-25484.27pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like [Cucur... [more]
BLAST of CaUC06G110780 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SQU68.8e-20071.43Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
Q9FKC31.1e-8843.07Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
Q9SCP44.1e-8839.41Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... [more]
Q9SV962.1e-4428.53Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
A7LN872.1e-4429.44Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4... [more]
BLAST of CaUC06G110780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C7L92.8e-26593.01pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Cucumis ... [more]
A0A0A0K7C82.4e-26192.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000680 PE=4 SV=1[more]
A0A6J1H6E52.8e-25789.94pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isofor... [more]
A0A6J1H3248.4e-25484.59pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isofor... [more]
A0A6J1L0G65.5e-25383.43pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like OS=Cuc... [more]
BLAST of CaUC06G110780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G06430.16.3e-20171.43Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48730.17.6e-9043.07Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53170.16.5e-8939.50Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G39620.11.5e-4528.53Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G39620.21.5e-4528.53Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 411..459
e-value: 2.1E-4
score: 21.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 341..388
e-value: 4.1E-8
score: 33.3
coord: 482..528
e-value: 1.5E-12
score: 47.5
coord: 236..283
e-value: 5.7E-13
score: 48.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 311..335
e-value: 0.084
score: 13.2
coord: 203..232
e-value: 0.5
score: 10.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 345..376
e-value: 0.002
score: 16.2
coord: 273..306
e-value: 4.7E-6
score: 24.4
coord: 238..272
e-value: 1.5E-6
score: 26.0
coord: 415..447
e-value: 4.7E-4
score: 18.2
coord: 308..342
e-value: 1.5E-4
score: 19.7
coord: 203..235
e-value: 6.9E-4
score: 17.6
coord: 380..408
e-value: 4.8E-5
score: 21.3
coord: 486..518
e-value: 5.3E-8
score: 30.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..341
score: 8.834866
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 482..516
score: 11.301158
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 342..376
score: 9.646002
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 377..411
score: 8.549871
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 200..234
score: 9.152743
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 412..446
score: 9.536388
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 271..305
score: 11.334042
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 334..408
e-value: 5.1E-14
score: 54.2
coord: 266..333
e-value: 1.5E-18
score: 69.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 476..544
e-value: 7.8E-14
score: 53.4
coord: 409..475
e-value: 1.2E-10
score: 43.0
coord: 140..265
e-value: 6.8E-21
score: 76.4
NoneNo IPR availablePANTHERPTHR47932:SF4OS03G0309800 PROTEINcoord: 89..550
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 89..550

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G110780.1CaUC06G110780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009553 embryo sac development
biological_process GO:0009555 pollen development
biological_process GO:0048868 pollen tube development
cellular_component GO:0009507 chloroplast
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0019843 rRNA binding