CaUC06G110710 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G110710
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCiama_Chr06: 5025890 .. 5031186 (+)
RNA-Seq ExpressionCaUC06G110710
SyntenyCaUC06G110710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATTGATGACTTACCTCCTCCCCTCCTGCATCAAACAAAGATGTAATTGCACACTTTTTTCCTTTTTGGAATTTGCTCGGAATGTTGTGGATTTAGAGAGAAGGGAAACTTATCAATATGGCCGATAGGTGTGAAGAAATGTGCTGAAGTATCTACTACAAGCCCCGCAACCAACAAAGAATTATTCGAGGAGGTTGGTATAGTGTGGTGGATGGTTTTATATCGATGAGAGAACTTAATAATTATACTTTACTCATACATCCAAGTATTTGAATGATGAAACTTCTTTGTTGTGATTATTAGGGACTTCGTTACATGCCAAATTTATTTTTTGAACAAATTCAATGAGGCCAAATATTCTACTTGTAAGTCGTACAATGCTTAACGCTTATCTTATGGTTTATCATATTCAAAATTGCAAATATAGCAAAATCTATCGGTGATTCTATCGTCTTATAGATTTATAGCTCCAACAATATGGTCTTTCACTAATAGACTTTGCTATATTTGCAATTTTTTTAAAAAATATTGCTATACATTTAGTTATTATCCCTAAAATTGCTACTCATTACAATTTTTCAAAGAAAATTGTTGAAAAAGTAGTTTTATACATTTGAACGAAAAGAATCTACCAAAAAAAAAAATGAAAATAATAGAGATAAGTGGATTTTCAAATCTATTTATGGGATGGAATAGCTACATTATAACGGTTTGACTCAATCATTTTTCATGATTAATTTAGATGGGCAAAGTGGTGGTTTCATTTGGTGTGAAAGCGAGGATGAAATATATTCATTGGTTTACTTATCAATATTAAAGACAAATCATTATCTCCAACATCATATAAATATCTATGCAACTTAAGAAAAGATAAATAAACCTTTTGATCCCTAGAATTTGAAGAAGATATTTACTTGGTCAGTGAGGCCTCATAAGTAACATTTTGTCTCAAAAGTTGCAAAACGGTTCAAAATGGTCTCTAAATATATTTAAATGTTAGTTCATGATGGCTTAATTTGAGTTAAATTGTTGGTTGTAATTGTTTATTTGGTGAAAATATATCAATTTAATAATTATTTCCTTGCTGTTCCCATATTTCCTCTCTTTCTCCTTACATTATCTCCCAACAACAATCCTTACATTATCATCAGTAGTCTCACTAATTGAAAGCCATTCTTTGTTTGGATCAAGAAATATTATTCTTTGTTTAAACACAAGAAGAACTTCCTCATTCCATGCAAATTTGGATGAGGAAATTCCTCATCAACAACAATATTTATCTTCCGTCCACTCTTAGTATGAATGAGAGAAATAAATCTAAAGTCAAAAAAACTCTAATGAACTAACAAGTTAGGGATTTGTAAGGATTATTTTGGGAAATTGCTATTTTTAATTTCAGCTTCTTAACTTTAGTTTGCCTGAATTATACTCTATATTTCCATTTACTTTCACCAAAAAGGCATGAGGTTTCCACTTTCACCTTGTTTAGAGATAATCTATTATCAAAGACTTTCCTTTTGCAGTGTTCCTCTGATACAAAAAATGTATGAATGTTGTTTCTCTTTTATTCACATATTTTATGTTGTTGAAAGTTGAAAAAATAATGGCTTCATTTTGTGTGGGGGAAAGGTTCTTTACAAGAAATGTTTAATTTTATTGAAATTTTTGGGAAAATAATATTTGGCAGAAAAGAACCTCATAAGTTGAAGGATAATTGTTGTTTTCTTAAAAAGAAAGAAAAGAAAGAAAGAAAATGAATCTATCAAAATTTTGGTCAAAATTTTCAAACTCTCACCACTAAAAGATATATATTTTTTATTTTTTTATTTTTTATTTTAAATCTTTTGACTTCAGTAACTAAAATTTAAATAAAAACAATAGGGTTAATATATATATAGAAGTTTGTTCAATTTTTGTCTAATTTTAATCTCTCTTCCTCTAAAAACCCGATCCAGTGTCCTCGAGCTTAGATCTGCACTTTATACAGTAAAAAAGGAAGCCACAGGGAACGGTGGAGCAATCTTTCAGAGAAATCAAGATCTTAGTTGATCGTATTGCTGCTGTCGACGTCACTATCACCGGTGAGGAGACCTTCTTGCATATCTTTAATGGCTTATCGGCCGAGTTCAACACGTTTTGGACTTCCATTCGAACTCGAGACACAACATTAGTGCTCGCAGAACTGGAAGTTGTCCTCGACGCAGAAGCTAAGGCGATCATTGTTCACCAATCGCCATCAGAACCGGTACCCACGACCATGACCGCTTTCTAGCATCTGTAGACGAGAATCATGGTGGTCGAAATTCACAGAACAGGGGCGACAGGCGTTCGATTCGTGGGAGAGGAAGGAATAATAATTGTAGGGTTTCTTTTAAAATCCTGACAGTCAATCCCAGCTTAGCCACTGATTACAATGGCGACGAAACAGTGAGTGCTTGTAATGGCCAATCCCTTACTATCACTCACAATGGGAGCGGTATACTCTCCACCCCATCTCATTTCTTTACTTTATCTAAAATTCATTGGTCCTCTTAATTATCTGCCAATCTTTTATCTATTAAAAAATTTTGGAAAATCTGTACCGATGACCCATATTTAGGGCCACTCGAAATCTGACCTCGCTTTCAAAGAAACTCAAATTTTGGCCTTTTGCTGTTCTTCCTGCTTTCTTCTACCTTCTTTCTTCTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGATGCTTCAGCTTTTTTTCTTTTTTCGTTTGCAATGTCTTCTCCAAGTCTCAGAAGCTAATGGCAAATCTTCTGCTATGCGCTCTCTGTGTGTCTATCCTGAGTCCATCAATCTGTCCGGCCTCCTTCAGGGCCGCATTAACAATTCCCATCTTCGTCAAATCCACGCCCGAGTCTTTCGTCTGCTGAAGCATCAAGACAATCTAATTGCAACTCGACTTATTGGCCACTACCCACATTCTGTTGGACTCAGAGTTTTCAATCAACTCATTCGCCCCAACATATTTCCTTGCAATGCCATTATCAGAGTACTTGCTGAACACAACTCTTCCTTCCTTGCCTTTTCCATCTTCAAATCTTTGAAGCACTTTTCACTTTCCCCTAATGACTTCACTTTTTCTTTCCTTCTCAAAGCGTTTCACCGTTCCAGCCATGCTCTAAATTTAAAACAAGTTCATACCCATGTCCTTAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCGCTTCTTGCGGTCTACGCGAGAGGCTTGAAGGATATGGCTTCTGCACATAAGATGTTCGATGAAATGTCGGATAGAGATATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCCCAGATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATGCAGCCGGAGGATGACACCATGGTCAGTGTTCTGTCTGCTTGTTCCAAGTTTCATATTGCTGAAATTGAGAAATGGGTTGTAGAATTAAGACGACTGGTTAATAAATTTGATTCCAAGGGCTCTTGTTGTGATTCAATCAATATTGTTCTTATTTATCTATATGGGAAGTGGGGGATGATTGAGAAGAGTGAAGAAAAGTTTAATGAAATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCATATTTTCAGAATGGTTTCCCTGTTGAAGCCTTGGCCCTTTTCCGTCTAATGGTTGAAAATTCCCATTGCAAACCTAACCATGTTACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATAGGAGATTTGCAGCTCGGTTGTTGGGTTCATGAAGTTCTCGAATGTGGTGGCCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCATTGATTGATATGTATTGTAAAAGTGGTAGCTTGGAGAGGGCAAAAGAAGTTTTTCATCAACTAATCAACAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTTAATGGCAAAGGCGATGAGGCATTGAAGCTTTTTGCCCAAATGCAAGAGGTTGATATAAGGCCAACGACCGGAACATTTATTGGTTTATTATCTGCTTGTAGCCATTCGGGTTTTCTAGAACAAGGGCGTCAAATTTTTATTGAAATGACTACCCGCTATTTAATATTGCCTAGTTTAGAACACTATGCTTGTTACATTGATCTCCTTGCTCGGGCAGGCCACTTCGATGATGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTACTCCATTCAAAATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCTGGCTATGTAATGCAGGCTAATTCATTTGCTACAGATCTTCAATGGGATGATGTCTCGGCTTTGAGATGGTTTATGAGAGAAAAGGGTATCCGTAAGCAGCCAGGCCAGAGTTGGATCAGTATAGATGGAATTGTACATGAATTTTTCTCAGCAACCAAATCACATCCTTATGTTGATCTATTATACAACACGTTGAATGTGCTTGAAAAACAAATGAAGCTAGTAATCCCATAG

mRNA sequence

ATGATCATTGATGACTTACCTCCTCCCCTCCTGCATCAAACAAAGATGAAGCCACAGGGAACGGTGGAGCAATCTTTCAGAGAAATCAAGATCTTAGTTGATCGTATTGCTGCTGTCGACGTCACTATCACCGGTGAGGAGACCTTCTTGCATATCTTTAATGGCTTATCGGCCGAGTTCAACACGTTTTGGACTTCCATTCGAACTCGAGACACAACATTAGTGCTCGCAGAACTGGAAGTTGTCCTCGACGCAGAAGCTAAGGCGATCATTGTTCACCAATCGCCATCAGAACCGAACAGGGGCGACAGGCGTTCGATTCGTGGGAGAGGAAGGAATAATAATTGTAGGGTTTCTTTTAAAATCCTGACAGTCAATCCCAGCTTAGCCACTGATTACAATGGCGACGAAACAGTGAGTGCTTGTAATGGCCAATCCCTTACTATCACTCACAATGGGAGCGAAGCTAATGGCAAATCTTCTGCTATGCGCTCTCTGTGTGTCTATCCTGAGTCCATCAATCTGTCCGGCCTCCTTCAGGGCCGCATTAACAATTCCCATCTTCGTCAAATCCACGCCCGAGTCTTTCGTCTGCTGAAGCATCAAGACAATCTAATTGCAACTCGACTTATTGGCCACTACCCACATTCTGTTGGACTCAGAGTTTTCAATCAACTCATTCGCCCCAACATATTTCCTTGCAATGCCATTATCAGAGTACTTGCTGAACACAACTCTTCCTTCCTTGCCTTTTCCATCTTCAAATCTTTGAAGCACTTTTCACTTTCCCCTAATGACTTCACTTTTTCTTTCCTTCTCAAAGCGTTTCACCGTTCCAGCCATGCTCTAAATTTAAAACAAGTTCATACCCATGTCCTTAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCGCTTCTTGCGGTCTACGCGAGAGGCTTGAAGGATATGGCTTCTGCACATAAGATGTTCGATGAAATGTCGGATAGAGATATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCCCAGATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATGCAGCCGGAGGATGACACCATGGTCAGTGTTCTGTCTGCTTGTTCCAAGTTTCATATTGCTGAAATTGAGAAATGGGTTGTAGAATTAAGACGACTGGTTAATAAATTTGATTCCAAGGGCTCTTGTTGTGATTCAATCAATATTGTTCTTATTTATCTATATGGGAAGTGGGGGATGATTGAGAAGAGTGAAGAAAAGTTTAATGAAATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCATATTTTCAGAATGGTTTCCCTGTTGAAGCCTTGGCCCTTTTCCGTCTAATGGTTGAAAATTCCCATTGCAAACCTAACCATGTTACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATAGGAGATTTGCAGCTCGGTTGTTGGGTTCATGAAGTTCTCGAATGTGGTGGCCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCATTGATTGATATGTATTGTAAAAGTGGTAGCTTGGAGAGGGCAAAAGAAGTTTTTCATCAACTAATCAACAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTTAATGGCAAAGGCGATGAGGCATTGAAGCTTTTTGCCCAAATGCAAGAGGTTGATATAAGGCCAACGACCGGAACATTTATTGGTTTATTATCTGCTTGTAGCCATTCGGGTTTTCTAGAACAAGGGCGTCAAATTTTTATTGAAATGACTACCCGCTATTTAATATTGCCTAGTTTAGAACACTATGCTTGTTACATTGATCTCCTTGCTCGGGCAGGCCACTTCGATGATGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTACTCCATTCAAAATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCTGGCTATGTAATGCAGGCTAATTCATTTGCTACAGATCTTCAATGGGATGATGTCTCGGCTTTGAGATGGTTTATGAGAGAAAAGGGTATCCGTAAGCAGCCAGGCCAGAGTTGGATCAGTATAGATGGAATTGTACATGAATTTTTCTCAGCAACCAAATCACATCCTTATGTTGATCTATTATACAACACGTTGAATGTGCTTGAAAAACAAATGAAGCTAGTAATCCCATAG

Coding sequence (CDS)

ATGATCATTGATGACTTACCTCCTCCCCTCCTGCATCAAACAAAGATGAAGCCACAGGGAACGGTGGAGCAATCTTTCAGAGAAATCAAGATCTTAGTTGATCGTATTGCTGCTGTCGACGTCACTATCACCGGTGAGGAGACCTTCTTGCATATCTTTAATGGCTTATCGGCCGAGTTCAACACGTTTTGGACTTCCATTCGAACTCGAGACACAACATTAGTGCTCGCAGAACTGGAAGTTGTCCTCGACGCAGAAGCTAAGGCGATCATTGTTCACCAATCGCCATCAGAACCGAACAGGGGCGACAGGCGTTCGATTCGTGGGAGAGGAAGGAATAATAATTGTAGGGTTTCTTTTAAAATCCTGACAGTCAATCCCAGCTTAGCCACTGATTACAATGGCGACGAAACAGTGAGTGCTTGTAATGGCCAATCCCTTACTATCACTCACAATGGGAGCGAAGCTAATGGCAAATCTTCTGCTATGCGCTCTCTGTGTGTCTATCCTGAGTCCATCAATCTGTCCGGCCTCCTTCAGGGCCGCATTAACAATTCCCATCTTCGTCAAATCCACGCCCGAGTCTTTCGTCTGCTGAAGCATCAAGACAATCTAATTGCAACTCGACTTATTGGCCACTACCCACATTCTGTTGGACTCAGAGTTTTCAATCAACTCATTCGCCCCAACATATTTCCTTGCAATGCCATTATCAGAGTACTTGCTGAACACAACTCTTCCTTCCTTGCCTTTTCCATCTTCAAATCTTTGAAGCACTTTTCACTTTCCCCTAATGACTTCACTTTTTCTTTCCTTCTCAAAGCGTTTCACCGTTCCAGCCATGCTCTAAATTTAAAACAAGTTCATACCCATGTCCTTAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCGCTTCTTGCGGTCTACGCGAGAGGCTTGAAGGATATGGCTTCTGCACATAAGATGTTCGATGAAATGTCGGATAGAGATATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCCCAGATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATGCAGCCGGAGGATGACACCATGGTCAGTGTTCTGTCTGCTTGTTCCAAGTTTCATATTGCTGAAATTGAGAAATGGGTTGTAGAATTAAGACGACTGGTTAATAAATTTGATTCCAAGGGCTCTTGTTGTGATTCAATCAATATTGTTCTTATTTATCTATATGGGAAGTGGGGGATGATTGAGAAGAGTGAAGAAAAGTTTAATGAAATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCATATTTTCAGAATGGTTTCCCTGTTGAAGCCTTGGCCCTTTTCCGTCTAATGGTTGAAAATTCCCATTGCAAACCTAACCATGTTACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATAGGAGATTTGCAGCTCGGTTGTTGGGTTCATGAAGTTCTCGAATGTGGTGGCCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCATTGATTGATATGTATTGTAAAAGTGGTAGCTTGGAGAGGGCAAAAGAAGTTTTTCATCAACTAATCAACAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTTAATGGCAAAGGCGATGAGGCATTGAAGCTTTTTGCCCAAATGCAAGAGGTTGATATAAGGCCAACGACCGGAACATTTATTGGTTTATTATCTGCTTGTAGCCATTCGGGTTTTCTAGAACAAGGGCGTCAAATTTTTATTGAAATGACTACCCGCTATTTAATATTGCCTAGTTTAGAACACTATGCTTGTTACATTGATCTCCTTGCTCGGGCAGGCCACTTCGATGATGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTACTCCATTCAAAATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCTGGCTATGTAATGCAGGCTAATTCATTTGCTACAGATCTTCAATGGGATGATGTCTCGGCTTTGAGATGGTTTATGAGAGAAAAGGGTATCCGTAAGCAGCCAGGCCAGAGTTGGATCAGTATAGATGGAATTGTACATGAATTTTTCTCAGCAACCAAATCACATCCTTATGTTGATCTATTATACAACACGTTGAATGTGCTTGAAAAACAAATGAAGCTAGTAATCCCATAG

Protein sequence

MIIDDLPPPLLHQTKMKPQGTVEQSFREIKILVDRIAAVDVTITGEETFLHIFNGLSAEFNTFWTSIRTRDTTLVLAELEVVLDAEAKAIIVHQSPSEPNRGDRRSIRGRGRNNNCRVSFKILTVNPSLATDYNGDETVSACNGQSLTITHNGSEANGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRRLVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLVIP
Homology
BLAST of CaUC06G110710 vs. NCBI nr
Match: XP_038888799.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 563/610 (92.30%), Postives = 580/610 (95.08%), Query Frame = 0

Query: 153 GSEANGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIG 212
           G   NGKS AMR+LC+ P+SINLS LLQGRI+NSHLRQIHARVFRLLKHQDNLIATRLIG
Sbjct: 17  GQMVNGKSYAMRALCINPDSINLSDLLQGRISNSHLRQIHARVFRLLKHQDNLIATRLIG 76

Query: 213 HYPHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFL 272
           HYPHSVGL VFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKH SLSPNDFTFSFL
Sbjct: 77  HYPHSVGLSVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHLSLSPNDFTFSFL 136

Query: 273 LKAFHRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRD 332
           LKAFHRSSHALN+KQVHTHVLKMGYLGDSFISNALL VYARGLKDMASAHK+FDEMS R+
Sbjct: 137 LKAFHRSSHALNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMASAHKLFDEMSGRE 196

Query: 333 MACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVV 392
           +A CWTSLIAGYAQMGLAE ALL FVMMI+ENMQPEDDTMVSVLSACSKFHIAEIEKWVV
Sbjct: 197 IA-CWTSLIAGYAQMGLAENALLHFVMMIEENMQPEDDTMVSVLSACSKFHIAEIEKWVV 256

Query: 393 ELRRLVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYF 452
           ELR+LVNKFD K SCCDSINIVLIYLYGKWG IEKSEEKFNEIVDKRSVLVWNSMINAYF
Sbjct: 257 ELRQLVNKFDPKSSCCDSINIVLIYLYGKWGKIEKSEEKFNEIVDKRSVLVWNSMINAYF 316

Query: 453 QNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGII 512
           QNG PVE L LFRLMVENSHCKPNHVTMVTVLSACA IGDLQLGCWVH+ LE GGRRG+I
Sbjct: 317 QNGCPVETLTLFRLMVENSHCKPNHVTMVTVLSACALIGDLQLGCWVHDFLEHGGRRGVI 376

Query: 513 ASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQ 572
           ASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQ
Sbjct: 377 ASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQ 436

Query: 573 MQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAG 632
           MQEVDIRPTTGTF+ LLSACSHSGFLEQGRQIFIEMTTRY ILP+LEHYACYIDLLARAG
Sbjct: 437 MQEVDIRPTTGTFVSLLSACSHSGFLEQGRQIFIEMTTRYFILPTLEHYACYIDLLARAG 496

Query: 633 HFDDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQAN 692
           HF+DALEVVSTMPFEPNN VWSSLL GCLLHSKFELAQYVSKKLVEVDPENSAGYVMQAN
Sbjct: 497 HFEDALEVVSTMPFEPNNCVWSSLLGGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQAN 556

Query: 693 SFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNV 752
           SFATDLQWDDVSALRWFMREKG+ KQPGQSWISIDGIVHEFFSA KSHP VDLLYNTLN 
Sbjct: 557 SFATDLQWDDVSALRWFMREKGVHKQPGQSWISIDGIVHEFFSAMKSHPSVDLLYNTLNE 616

Query: 753 LEKQMKLVIP 763
           LEKQMKLV+P
Sbjct: 617 LEKQMKLVLP 625

BLAST of CaUC06G110710 vs. NCBI nr
Match: TYK06804.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 552/606 (91.09%), Postives = 574/606 (94.72%), Query Frame = 0

Query: 157 NGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 216
           N KS AMR L V PE INLS LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 30  NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 89

Query: 217 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 276
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 90  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 149

Query: 277 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACC 336
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHK+FDEMSDR+MACC
Sbjct: 150 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 209

Query: 337 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRR 396
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR 
Sbjct: 210 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 269

Query: 397 LVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 456
           LVNKFDSK SCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 270 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 329

Query: 457 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 516
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 330 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 389

Query: 517 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEV 576
           MLATALIDMYCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQE+
Sbjct: 390 MLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 449

Query: 577 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDD 636
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YLI PSLEHYACYIDLLARAG F+D
Sbjct: 450 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 509

Query: 637 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 696
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 510 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 569

Query: 697 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 756
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 570 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 629

Query: 757 MKLVIP 763
            KLVIP
Sbjct: 630 TKLVIP 635

BLAST of CaUC06G110710 vs. NCBI nr
Match: XP_008455016.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 552/606 (91.09%), Postives = 574/606 (94.72%), Query Frame = 0

Query: 157 NGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 216
           N KS AMR L V PE INLS LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 3   NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 62

Query: 217 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 276
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 63  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 122

Query: 277 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACC 336
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHK+FDEMSDR+MACC
Sbjct: 123 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 182

Query: 337 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRR 396
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR 
Sbjct: 183 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 242

Query: 397 LVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 456
           LVNKFDSK SCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 243 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 302

Query: 457 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 516
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 303 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 362

Query: 517 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEV 576
           MLATALIDMYCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQE+
Sbjct: 363 MLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 422

Query: 577 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDD 636
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YLI PSLEHYACYIDLLARAG F+D
Sbjct: 423 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 482

Query: 637 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 696
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 483 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 542

Query: 697 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 756
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 543 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 602

Query: 757 MKLVIP 763
            KLVIP
Sbjct: 603 TKLVIP 608

BLAST of CaUC06G110710 vs. NCBI nr
Match: KAA0031351.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 551/606 (90.92%), Postives = 574/606 (94.72%), Query Frame = 0

Query: 157 NGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 216
           N KS AMR L V PE INLS LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 30  NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 89

Query: 217 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 276
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 90  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 149

Query: 277 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACC 336
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHK+FDEMSDR+MACC
Sbjct: 150 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 209

Query: 337 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRR 396
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR 
Sbjct: 210 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 269

Query: 397 LVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 456
           LVNKFDSK SCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 270 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 329

Query: 457 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 516
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 330 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 389

Query: 517 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEV 576
           MLATALID+YCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQE+
Sbjct: 390 MLATALIDLYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 449

Query: 577 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDD 636
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YLI PSLEHYACYIDLLARAG F+D
Sbjct: 450 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 509

Query: 637 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 696
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 510 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 569

Query: 697 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 756
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 570 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 629

Query: 757 MKLVIP 763
            KLVIP
Sbjct: 630 TKLVIP 635

BLAST of CaUC06G110710 vs. NCBI nr
Match: XP_031744265.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 1116.3 bits (2886), Expect = 0.0e+00
Identity = 545/600 (90.83%), Postives = 571/600 (95.17%), Query Frame = 0

Query: 163 MRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 222
           MR LCV PE I+LS LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV
Sbjct: 1   MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60

Query: 223 FNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHA 282
           FNQLIRPNIFPCNAIIRVLAEHNSSF A SIFK LKH SLSPNDFTFSFLLKAFHRS +A
Sbjct: 61  FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120

Query: 283 LNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACCWTSLIA 342
           LN+KQVHTHVLKMGY GDSFISN+LL VYARGLK+MASAHK+FDEMSDR+MACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180

Query: 343 GYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRRLVNKFD 402
           GYAQMGLAEKA+LLF MM+KEN+QPEDDT+VSVLSACSK  IAEIEKWVVELR+LVNK D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240

Query: 403 SKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALA 462
           SK SCCDSINIVLIYLYGKWGM+EKSEEKFNE+VDKRSVLVWNSMINAYFQNGFPVEAL 
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300

Query: 463 LFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATAL 522
           LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360

Query: 523 IDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTT 582
           IDMYCK GSLERAKEVFHQLINKDVI+FNAMIMGLAVN KGDEALKLFAQMQE++I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420

Query: 583 GTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVS 642
           GTFIGLLSACSHSGFLEQGRQIFIEMTT YL+ PSLEHYACYIDLLARAGHFDDALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480

Query: 643 TMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 702
           TMPFEPNNFVWSSLLRGCLLHS+FELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540

Query: 703 VSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLVIP 762
           VSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY TLN LEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600

BLAST of CaUC06G110710 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.9e-100
Identity = 211/606 (34.82%), Postives = 337/606 (55.61%), Query Frame = 0

Query: 188 LRQIHARVFRLLKHQDNLIATRLIGH---YPHSVGL----RVFNQLIRPNIFPCNAIIRV 247
           LR IHA++ ++  H  N   ++LI      PH  GL     VF  +  PN+   N + R 
Sbjct: 49  LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108

Query: 248 LAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGD 307
            A  +    A  ++  +    L PN +TF F+LK+  +S      +Q+H HVLK+G   D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168

Query: 308 SFISNALLAVYARGLKDMASAHKMFDEMSDRDM--------------------------- 367
            ++  +L+++Y +  + +  AHK+FD+   RD+                           
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 228

Query: 368 ---ACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKW 427
                 W ++I+GYA+ G  ++AL LF  M+K N++P++ TMV+V+SAC+       +  
Sbjct: 229 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA-------QSG 288

Query: 428 VVELRRLVNKFDSKGSCCDSINIV--LIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMI 487
            +EL R V+ +        ++ IV  LI LY K G +E +   F E +  + V+ WN++I
Sbjct: 289 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF-ERLPYKDVISWNTLI 348

Query: 488 NAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGR 547
             Y       EAL LF+ M+ +    PN VTM+++L ACA +G + +G W+H  ++   R
Sbjct: 349 GGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYID--KR 408

Query: 548 RGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALK 607
              + +   L T+LIDMY K G +E A +VF+ +++K + S+NAMI G A++G+ D +  
Sbjct: 409 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 468

Query: 608 LFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLL 667
           LF++M+++ I+P   TF+GLLSACSHSG L+ GR IF  MT  Y + P LEHY C IDLL
Sbjct: 469 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 528

Query: 668 ARAGHFDDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYV 727
             +G F +A E+++ M  EP+  +W SLL+ C +H   EL +  ++ L++++PEN   YV
Sbjct: 529 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 588

Query: 728 MQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYN 755
           + +N +A+  +W++V+  R  + +KG++K PG S I ID +VHEF    K HP    +Y 
Sbjct: 589 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 642

BLAST of CaUC06G110710 vs. ExPASy Swiss-Prot
Match: Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.6e-96
Identity = 201/585 (34.36%), Postives = 321/585 (54.87%), Query Frame = 0

Query: 186 SHLRQIHARVFRLLKHQD----NLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRVL 245
           +HL+QIH  +     H D    NL+  R +          +F+    PNIF  N++I   
Sbjct: 27  NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86

Query: 246 AEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGDS 305
             ++       +F S++   L  + FTF  +LKA  R+S       +H+ V+K G+  D 
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146

Query: 306 FISNALLAVYARGLKDMASAHKMFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFVMMI 365
               +LL++Y+ G   +  AHK+FDE+ DR +   WT+L +GY   G   +A+ LF  M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVV-TWTALFSGYTTSGRHREAIDLFKKMV 206

Query: 366 KENMQPEDDTMVSVLSACSKFHIAEIE--KWVV----ELRRLVNKFDSKGSCCDSINIVL 425
           +  ++P+   +V VLSAC   H+ +++  +W+V    E+    N F         +   L
Sbjct: 207 EMGVKPDSYFIVQVLSAC--VHVGDLDSGEWIVKYMEEMEMQKNSF---------VRTTL 266

Query: 426 IYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKP 485
           + LY K G +EK+   F+ +V+K  ++ W++MI  Y  N FP E + LF  M++  + KP
Sbjct: 267 VNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQ-ENLKP 326

Query: 486 NHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERA 545
           +  ++V  LS+CA +G L LG W   +++    R    +N  +A ALIDMY K G++ R 
Sbjct: 327 DQFSIVGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARG 386

Query: 546 KEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHS 605
            EVF ++  KD++  NA I GLA NG    +  +F Q +++ I P   TF+GLL  C H+
Sbjct: 387 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 446

Query: 606 GFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVSTMPFEPNNFVWSS 665
           G ++ G + F  ++  Y +  ++EHY C +DL  RAG  DDA  ++  MP  PN  VW +
Sbjct: 447 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 506

Query: 666 LLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGI 725
           LL GC L    +LA+ V K+L+ ++P N+  YV  +N ++   +WD+ + +R  M +KG+
Sbjct: 507 LLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 566

Query: 726 RKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLV 761
           +K PG SWI ++G VHEF +  KSHP  D +Y  L  L  +M+L+
Sbjct: 567 KKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592

BLAST of CaUC06G110710 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.5e-93
Identity = 201/622 (32.32%), Postives = 335/622 (53.86%), Query Frame = 0

Query: 178 LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHS------VGLRVFNQLIRPNI 237
           L++  ++   L+Q H  + R     D   A++L      S         +VF+++ +PN 
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95

Query: 238 FPCNAIIRVLAEHNSSFLAFSIFKSL-KHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHT 297
           F  N +IR  A      L+   F  +       PN +TF FL+KA    S     + +H 
Sbjct: 96  FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155

Query: 298 HVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACCWTSLIAGYAQMGLA 357
             +K     D F++N+L+  Y     D+ SA K+F  + ++D+   W S+I G+ Q G  
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKGSP 215

Query: 358 EKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEK----WVVELRRLVNKFDSKGS 417
           +KAL LF  M  E+++    TMV VLSAC+K    E  +    ++ E R  VN       
Sbjct: 216 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL------ 275

Query: 418 CCDSINIVLIYLYGKWGMIEKSEEKFNEIVDK---------------------------- 477
              ++   ++ +Y K G IE ++  F+ + +K                            
Sbjct: 276 ---TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 335

Query: 478 --RSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLG 537
             + ++ WN++I+AY QNG P EAL +F  +    + K N +T+V+ LSACAQ+G L+LG
Sbjct: 336 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 395

Query: 538 CWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMG 597
            W+H  ++  G    I  N  + +ALI MY K G LE+++EVF+ +  +DV  ++AMI G
Sbjct: 396 RWIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 455

Query: 598 LAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILP 657
           LA++G G+EA+ +F +MQE +++P   TF  +  ACSH+G +++   +F +M + Y I+P
Sbjct: 456 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 515

Query: 658 SLEHYACYIDLLARAGHFDDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKL 717
             +HYAC +D+L R+G+ + A++ +  MP  P+  VW +LL  C +H+   LA+    +L
Sbjct: 516 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 575

Query: 718 VEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSA 759
           +E++P N   +V+ +N +A   +W++VS LR  MR  G++K+PG S I IDG++HEF S 
Sbjct: 576 LELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSG 635

BLAST of CaUC06G110710 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.1e-90
Identity = 199/590 (33.73%), Postives = 331/590 (56.10%), Query Frame = 0

Query: 176 SGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVG-----LRVFNQLIRPN 235
           + L+    + + L+QIHAR+  L       + T+LI H   S G      +VF+ L RP 
Sbjct: 25  ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQ 84

Query: 236 IFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHT 295
           IFP NAIIR  + +N    A  ++ +++   +SP+ FTF  LLKA    SH    + VH 
Sbjct: 85  IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 144

Query: 296 HVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFD--EMSDRDMACCWTSLIAGYAQMG 355
            V ++G+  D F+ N L+A+YA+  + + SA  +F+   + +R +   WT++++ YAQ G
Sbjct: 145 QVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIV-SWTAIVSAYAQNG 204

Query: 356 LAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRRLVNKFDSKGSCC 415
              +AL +F  M K +++P+   +VSVL+A   F   +  K    +   V K   +    
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNA---FTCLQDLKQGRSIHASVVKMGLEIE-- 264

Query: 416 DSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALALFRLMV 475
             + I L  +Y K G +  ++  F++ +   ++++WN+MI+ Y +NG+  EA+ +F  M+
Sbjct: 265 PDLLISLNTMYAKCGQVATAKILFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 324

Query: 476 ENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCK 535
            N   +P+ +++ + +SACAQ+G L+    ++E +     R     +  +++ALIDM+ K
Sbjct: 325 -NKDVRPDTISITSAISACAQVGSLEQARSMYEYV----GRSDYRDDVFISSALIDMFAK 384

Query: 536 SGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGL 595
            GS+E A+ VF + +++DV+ ++AMI+G  ++G+  EA+ L+  M+   + P   TF+GL
Sbjct: 385 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 444

Query: 596 LSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVSTMPFEP 655
           L AC+HSG + +G   F  M   + I P  +HYAC IDLL RAGH D A EV+  MP +P
Sbjct: 445 LMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 504

Query: 656 NNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRW 715
              VW +LL  C  H   EL +Y +++L  +DP N+  YV  +N +A    WD V+ +R 
Sbjct: 505 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 564

Query: 716 FMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMK 759
            M+EKG+ K  G SW+ + G +  F    KSHP  + +   +  +E ++K
Sbjct: 565 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599

BLAST of CaUC06G110710 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.1e-90
Identity = 191/576 (33.16%), Postives = 321/576 (55.73%), Query Frame = 0

Query: 184 NNSHLRQIHARVFRLLKHQDNLIATRLIGHY----PHSVGLRVFNQLIRPNIFPCNAIIR 243
           N + ++Q+HA++ R   H+D  IA +LI         ++ +RVFNQ+  PN+  CN++IR
Sbjct: 31  NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90

Query: 244 VLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLG 303
             A+++  + AF +F  ++ F L  ++FT+ FLLKA    S    +K +H H+ K+G   
Sbjct: 91  AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150

Query: 304 DSFISNALLAVYAR-GLKDMASAHKMFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFV 363
           D ++ NAL+  Y+R G   +  A K+F++MS+RD    W S++ G  + G    A  LF 
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFD 210

Query: 364 MMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRRLVNKFDSKGSCCDSINIVLIYL 423
            M + ++    +TM+   + C +   A           L  K   + +   S    ++  
Sbjct: 211 EMPQRDL-ISWNTMLDGYARCREMSKA---------FELFEKMPERNTVSWS---TMVMG 270

Query: 424 YGKWGMIEKSEEKFNEI-VDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNH 483
           Y K G +E +   F+++ +  ++V+ W  +I  Y + G   EA  L   MV  S  K + 
Sbjct: 271 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGLKFDA 330

Query: 484 VTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKE 543
             ++++L+AC + G L LG  +H +L    +R  + SN  +  AL+DMY K G+L++A +
Sbjct: 331 AAVISILAACTESGLLSLGMRIHSIL----KRSNLGSNAYVLNALLDMYAKCGNLKKAFD 390

Query: 544 VFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGF 603
           VF+ +  KD++S+N M+ GL V+G G EA++LF++M+   IRP   TFI +L +C+H+G 
Sbjct: 391 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 450

Query: 604 LEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVSTMPFEPNNFVWSSLL 663
           +++G   F  M   Y ++P +EHY C +DLL R G   +A++VV TMP EPN  +W +LL
Sbjct: 451 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 510

Query: 664 RGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRK 723
             C +H++ ++A+ V   LV++DP +   Y + +N +A    W+ V+ +R  M+  G+ K
Sbjct: 511 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEK 570

Query: 724 QPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVL 754
             G S + ++  +HEF    KSHP  D +Y  L  L
Sbjct: 571 PSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587

BLAST of CaUC06G110710 vs. ExPASy TrEMBL
Match: A0A5D3C6A4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001060 PE=4 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 552/606 (91.09%), Postives = 574/606 (94.72%), Query Frame = 0

Query: 157 NGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 216
           N KS AMR L V PE INLS LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 30  NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 89

Query: 217 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 276
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 90  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 149

Query: 277 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACC 336
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHK+FDEMSDR+MACC
Sbjct: 150 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 209

Query: 337 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRR 396
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR 
Sbjct: 210 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 269

Query: 397 LVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 456
           LVNKFDSK SCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 270 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 329

Query: 457 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 516
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 330 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 389

Query: 517 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEV 576
           MLATALIDMYCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQE+
Sbjct: 390 MLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 449

Query: 577 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDD 636
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YLI PSLEHYACYIDLLARAG F+D
Sbjct: 450 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 509

Query: 637 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 696
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 510 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 569

Query: 697 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 756
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 570 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 629

Query: 757 MKLVIP 763
            KLVIP
Sbjct: 630 TKLVIP 635

BLAST of CaUC06G110710 vs. ExPASy TrEMBL
Match: A0A1S3BZG8 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495291 PE=4 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 552/606 (91.09%), Postives = 574/606 (94.72%), Query Frame = 0

Query: 157 NGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 216
           N KS AMR L V PE INLS LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 3   NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 62

Query: 217 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 276
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 63  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 122

Query: 277 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACC 336
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHK+FDEMSDR+MACC
Sbjct: 123 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 182

Query: 337 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRR 396
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR 
Sbjct: 183 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 242

Query: 397 LVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 456
           LVNKFDSK SCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 243 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 302

Query: 457 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 516
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 303 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 362

Query: 517 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEV 576
           MLATALIDMYCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQE+
Sbjct: 363 MLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 422

Query: 577 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDD 636
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YLI PSLEHYACYIDLLARAG F+D
Sbjct: 423 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 482

Query: 637 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 696
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 483 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 542

Query: 697 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 756
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 543 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 602

Query: 757 MKLVIP 763
            KLVIP
Sbjct: 603 TKLVIP 608

BLAST of CaUC06G110710 vs. ExPASy TrEMBL
Match: A0A5A7SP64 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001050 PE=4 SV=1)

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 551/606 (90.92%), Postives = 574/606 (94.72%), Query Frame = 0

Query: 157 NGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 216
           N KS AMR L V PE INLS LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH
Sbjct: 30  NIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 89

Query: 217 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 276
           SVGLRVFNQLIRPNIFPCNAIIRVLAEHN+SFLA SIFKSLKH SLSPNDFTFSFLLKAF
Sbjct: 90  SVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLKAF 149

Query: 277 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACC 336
           HRS +AL++KQVHTHVLKMGY GDSFISNALL VYARGLKDMASAHK+FDEMSDR+MACC
Sbjct: 150 HRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACC 209

Query: 337 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRR 396
           WTSLIAGYAQMGLAEKA+L+FV MIKENMQPEDDTMVSVLSACSKF IAEIEKWVV LR 
Sbjct: 210 WTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRE 269

Query: 397 LVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 456
           LVNKFDSK SCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNGF
Sbjct: 270 LVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGF 329

Query: 457 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 516
           PVEAL LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIASNK
Sbjct: 330 PVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNK 389

Query: 517 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEV 576
           MLATALID+YCK GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQE+
Sbjct: 390 MLATALIDLYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEI 449

Query: 577 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDD 636
           DIRP+TGTFIGLLSACSHSGFLEQG QIFIEMTT+YLI PSLEHYACYIDLLARAG F+D
Sbjct: 450 DIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFED 509

Query: 637 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 696
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSFA+
Sbjct: 510 ALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFAS 569

Query: 697 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 756
           D QWDDVSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLN L+KQ
Sbjct: 570 DRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQ 629

Query: 757 MKLVIP 763
            KLVIP
Sbjct: 630 TKLVIP 635

BLAST of CaUC06G110710 vs. ExPASy TrEMBL
Match: A0A0A0K4I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1)

HSP 1 Score: 1116.3 bits (2886), Expect = 0.0e+00
Identity = 545/600 (90.83%), Postives = 571/600 (95.17%), Query Frame = 0

Query: 163 MRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 222
           MR LCV PE I+LS LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV
Sbjct: 1   MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60

Query: 223 FNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHA 282
           FNQLIRPNIFPCNAIIRVLAEHNSSF A SIFK LKH SLSPNDFTFSFLLKAFHRS +A
Sbjct: 61  FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120

Query: 283 LNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACCWTSLIA 342
           LN+KQVHTHVLKMGY GDSFISN+LL VYARGLK+MASAHK+FDEMSDR+MACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180

Query: 343 GYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRRLVNKFD 402
           GYAQMGLAEKA+LLF MM+KEN+QPEDDT+VSVLSACSK  IAEIEKWVVELR+LVNK D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240

Query: 403 SKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALA 462
           SK SCCDSINIVLIYLYGKWGM+EKSEEKFNE+VDKRSVLVWNSMINAYFQNGFPVEAL 
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300

Query: 463 LFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATAL 522
           LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360

Query: 523 IDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTT 582
           IDMYCK GSLERAKEVFHQLINKDVI+FNAMIMGLAVN KGDEALKLFAQMQE++I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420

Query: 583 GTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVS 642
           GTFIGLLSACSHSGFLEQGRQIFIEMTT YL+ PSLEHYACYIDLLARAGHFDDALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480

Query: 643 TMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 702
           TMPFEPNNFVWSSLLRGCLLHS+FELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540

Query: 703 VSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLVIP 762
           VSALRWFMREKG+ KQPGQSWISIDG VHEFFSATKSHPYVDLLY TLN LEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600

BLAST of CaUC06G110710 vs. ExPASy TrEMBL
Match: A0A6J1GKT0 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454858 PE=4 SV=1)

HSP 1 Score: 1062.4 bits (2746), Expect = 9.0e-307
Identity = 528/606 (87.13%), Postives = 560/606 (92.41%), Query Frame = 0

Query: 157 NGKSSAMRSLCVYPESINLSGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPH 216
           NGKS AMRS C+  E INLS LLQGRIN+S LRQIH RVFRLLKHQDNLIATRLIGHYP+
Sbjct: 3   NGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPY 62

Query: 217 SVGLRVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAF 276
           SVG+RVFNQL+RPNIFPCNAIIRVLAE N SFLAFSIFKSLK  SLSPNDFTFSFLLKAF
Sbjct: 63  SVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAF 122

Query: 277 HRSSHALNLKQVHTHVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACC 336
           HRSSH+ N+KQVHTHV+KMGYLGDSFISNALL VYARGLKDM SAH MFDEMS+R+MACC
Sbjct: 123 HRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACC 182

Query: 337 WTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRR 396
           WTSLIAGYA MGLAEKALLLFVMMIKEN+QPEDDTMVSVLSACSK  IAEIEKWV EL +
Sbjct: 183 WTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQ 242

Query: 397 LVNKFDSKGSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGF 456
           LVN+FD   SCCDSINIVL+YLYGKWG IEKSEEKFNEIVDKRS +VWNSMINAYFQNG 
Sbjct: 243 LVNEFD---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGC 302

Query: 457 PVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNK 516
           PVEAL LFRLM+EN HCKPNHVTMVTVLSACAQIGDLQLG  VHE LE GGRRGIIASNK
Sbjct: 303 PVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNK 362

Query: 517 MLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEV 576
           MLATALIDMYCKSGSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQE 
Sbjct: 363 MLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQES 422

Query: 577 DIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDD 636
           DI+PTTGTFIGLLSACSHSGFLEQGRQIFI+M TRY   PSL+HYACYIDLLARAG  +D
Sbjct: 423 DIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVED 482

Query: 637 ALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFAT 696
           ALEVVSTMPFEPNNFVWSSLLRGCLLHS+FELA+YVSKKLVEVDPE+SAGYVMQANSFAT
Sbjct: 483 ALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFAT 542

Query: 697 DLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQ 756
           DLQWDDVSALRWFMREKG+ KQPG+SWISIDG VHEFFSATKSHP VDLLY+TL+ LE+Q
Sbjct: 543 DLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELERQ 602

Query: 757 MKLVIP 763
           MKLVIP
Sbjct: 603 MKLVIP 605

BLAST of CaUC06G110710 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 367.9 bits (943), Expect = 2.0e-101
Identity = 211/606 (34.82%), Postives = 337/606 (55.61%), Query Frame = 0

Query: 188 LRQIHARVFRLLKHQDNLIATRLIGH---YPHSVGL----RVFNQLIRPNIFPCNAIIRV 247
           LR IHA++ ++  H  N   ++LI      PH  GL     VF  +  PN+   N + R 
Sbjct: 49  LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108

Query: 248 LAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGD 307
            A  +    A  ++  +    L PN +TF F+LK+  +S      +Q+H HVLK+G   D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168

Query: 308 SFISNALLAVYARGLKDMASAHKMFDEMSDRDM--------------------------- 367
            ++  +L+++Y +  + +  AHK+FD+   RD+                           
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 228

Query: 368 ---ACCWTSLIAGYAQMGLAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKW 427
                 W ++I+GYA+ G  ++AL LF  M+K N++P++ TMV+V+SAC+       +  
Sbjct: 229 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA-------QSG 288

Query: 428 VVELRRLVNKFDSKGSCCDSINIV--LIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMI 487
            +EL R V+ +        ++ IV  LI LY K G +E +   F E +  + V+ WN++I
Sbjct: 289 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF-ERLPYKDVISWNTLI 348

Query: 488 NAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGR 547
             Y       EAL LF+ M+ +    PN VTM+++L ACA +G + +G W+H  ++   R
Sbjct: 349 GGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYID--KR 408

Query: 548 RGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALK 607
              + +   L T+LIDMY K G +E A +VF+ +++K + S+NAMI G A++G+ D +  
Sbjct: 409 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 468

Query: 608 LFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLL 667
           LF++M+++ I+P   TF+GLLSACSHSG L+ GR IF  MT  Y + P LEHY C IDLL
Sbjct: 469 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 528

Query: 668 ARAGHFDDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYV 727
             +G F +A E+++ M  EP+  +W SLL+ C +H   EL +  ++ L++++PEN   YV
Sbjct: 529 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 588

Query: 728 MQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYN 755
           + +N +A+  +W++V+  R  + +KG++K PG S I ID +VHEF    K HP    +Y 
Sbjct: 589 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 642

BLAST of CaUC06G110710 vs. TAIR 10
Match: AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 353.6 bits (906), Expect = 4.0e-97
Identity = 201/585 (34.36%), Postives = 321/585 (54.87%), Query Frame = 0

Query: 186 SHLRQIHARVFRLLKHQD----NLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRVL 245
           +HL+QIH  +     H D    NL+  R +          +F+    PNIF  N++I   
Sbjct: 27  NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86

Query: 246 AEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLGDS 305
             ++       +F S++   L  + FTF  +LKA  R+S       +H+ V+K G+  D 
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146

Query: 306 FISNALLAVYARGLKDMASAHKMFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFVMMI 365
               +LL++Y+ G   +  AHK+FDE+ DR +   WT+L +GY   G   +A+ LF  M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVV-TWTALFSGYTTSGRHREAIDLFKKMV 206

Query: 366 KENMQPEDDTMVSVLSACSKFHIAEIE--KWVV----ELRRLVNKFDSKGSCCDSINIVL 425
           +  ++P+   +V VLSAC   H+ +++  +W+V    E+    N F         +   L
Sbjct: 207 EMGVKPDSYFIVQVLSAC--VHVGDLDSGEWIVKYMEEMEMQKNSF---------VRTTL 266

Query: 426 IYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKP 485
           + LY K G +EK+   F+ +V+K  ++ W++MI  Y  N FP E + LF  M++  + KP
Sbjct: 267 VNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQ-ENLKP 326

Query: 486 NHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERA 545
           +  ++V  LS+CA +G L LG W   +++    R    +N  +A ALIDMY K G++ R 
Sbjct: 327 DQFSIVGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARG 386

Query: 546 KEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHS 605
            EVF ++  KD++  NA I GLA NG    +  +F Q +++ I P   TF+GLL  C H+
Sbjct: 387 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 446

Query: 606 GFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVSTMPFEPNNFVWSS 665
           G ++ G + F  ++  Y +  ++EHY C +DL  RAG  DDA  ++  MP  PN  VW +
Sbjct: 447 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 506

Query: 666 LLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGI 725
           LL GC L    +LA+ V K+L+ ++P N+  YV  +N ++   +WD+ + +R  M +KG+
Sbjct: 507 LLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 566

Query: 726 RKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMKLV 761
           +K PG SWI ++G VHEF +  KSHP  D +Y  L  L  +M+L+
Sbjct: 567 KKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592

BLAST of CaUC06G110710 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 345.5 bits (885), Expect = 1.1e-94
Identity = 201/622 (32.32%), Postives = 335/622 (53.86%), Query Frame = 0

Query: 178 LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHS------VGLRVFNQLIRPNI 237
           L++  ++   L+Q H  + R     D   A++L      S         +VF+++ +PN 
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95

Query: 238 FPCNAIIRVLAEHNSSFLAFSIFKSL-KHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHT 297
           F  N +IR  A      L+   F  +       PN +TF FL+KA    S     + +H 
Sbjct: 96  FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155

Query: 298 HVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFDEMSDRDMACCWTSLIAGYAQMGLA 357
             +K     D F++N+L+  Y     D+ SA K+F  + ++D+   W S+I G+ Q G  
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKGSP 215

Query: 358 EKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEK----WVVELRRLVNKFDSKGS 417
           +KAL LF  M  E+++    TMV VLSAC+K    E  +    ++ E R  VN       
Sbjct: 216 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL------ 275

Query: 418 CCDSINIVLIYLYGKWGMIEKSEEKFNEIVDK---------------------------- 477
              ++   ++ +Y K G IE ++  F+ + +K                            
Sbjct: 276 ---TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 335

Query: 478 --RSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLG 537
             + ++ WN++I+AY QNG P EAL +F  +    + K N +T+V+ LSACAQ+G L+LG
Sbjct: 336 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 395

Query: 538 CWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMG 597
            W+H  ++  G    I  N  + +ALI MY K G LE+++EVF+ +  +DV  ++AMI G
Sbjct: 396 RWIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 455

Query: 598 LAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGRQIFIEMTTRYLILP 657
           LA++G G+EA+ +F +MQE +++P   TF  +  ACSH+G +++   +F +M + Y I+P
Sbjct: 456 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 515

Query: 658 SLEHYACYIDLLARAGHFDDALEVVSTMPFEPNNFVWSSLLRGCLLHSKFELAQYVSKKL 717
             +HYAC +D+L R+G+ + A++ +  MP  P+  VW +LL  C +H+   LA+    +L
Sbjct: 516 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 575

Query: 718 VEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRKQPGQSWISIDGIVHEFFSA 759
           +E++P N   +V+ +N +A   +W++VS LR  MR  G++K+PG S I IDG++HEF S 
Sbjct: 576 LELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSG 635

BLAST of CaUC06G110710 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 335.1 bits (858), Expect = 1.5e-91
Identity = 191/576 (33.16%), Postives = 321/576 (55.73%), Query Frame = 0

Query: 184 NNSHLRQIHARVFRLLKHQDNLIATRLIGHY----PHSVGLRVFNQLIRPNIFPCNAIIR 243
           N + ++Q+HA++ R   H+D  IA +LI         ++ +RVFNQ+  PN+  CN++IR
Sbjct: 31  NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90

Query: 244 VLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHTHVLKMGYLG 303
             A+++  + AF +F  ++ F L  ++FT+ FLLKA    S    +K +H H+ K+G   
Sbjct: 91  AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150

Query: 304 DSFISNALLAVYAR-GLKDMASAHKMFDEMSDRDMACCWTSLIAGYAQMGLAEKALLLFV 363
           D ++ NAL+  Y+R G   +  A K+F++MS+RD    W S++ G  + G    A  LF 
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFD 210

Query: 364 MMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRRLVNKFDSKGSCCDSINIVLIYL 423
            M + ++    +TM+   + C +   A           L  K   + +   S    ++  
Sbjct: 211 EMPQRDL-ISWNTMLDGYARCREMSKA---------FELFEKMPERNTVSWS---TMVMG 270

Query: 424 YGKWGMIEKSEEKFNEI-VDKRSVLVWNSMINAYFQNGFPVEALALFRLMVENSHCKPNH 483
           Y K G +E +   F+++ +  ++V+ W  +I  Y + G   EA  L   MV  S  K + 
Sbjct: 271 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGLKFDA 330

Query: 484 VTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCKSGSLERAKE 543
             ++++L+AC + G L LG  +H +L    +R  + SN  +  AL+DMY K G+L++A +
Sbjct: 331 AAVISILAACTESGLLSLGMRIHSIL----KRSNLGSNAYVLNALLDMYAKCGNLKKAFD 390

Query: 544 VFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGF 603
           VF+ +  KD++S+N M+ GL V+G G EA++LF++M+   IRP   TFI +L +C+H+G 
Sbjct: 391 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 450

Query: 604 LEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVSTMPFEPNNFVWSSLL 663
           +++G   F  M   Y ++P +EHY C +DLL R G   +A++VV TMP EPN  +W +LL
Sbjct: 451 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 510

Query: 664 RGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKGIRK 723
             C +H++ ++A+ V   LV++DP +   Y + +N +A    W+ V+ +R  M+  G+ K
Sbjct: 511 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEK 570

Query: 724 QPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVL 754
             G S + ++  +HEF    KSHP  D +Y  L  L
Sbjct: 571 PSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587

BLAST of CaUC06G110710 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 335.1 bits (858), Expect = 1.5e-91
Identity = 199/590 (33.73%), Postives = 331/590 (56.10%), Query Frame = 0

Query: 176 SGLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVG-----LRVFNQLIRPN 235
           + L+    + + L+QIHAR+  L       + T+LI H   S G      +VF+ L RP 
Sbjct: 25  ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQ 84

Query: 236 IFPCNAIIRVLAEHNSSFLAFSIFKSLKHFSLSPNDFTFSFLLKAFHRSSHALNLKQVHT 295
           IFP NAIIR  + +N    A  ++ +++   +SP+ FTF  LLKA    SH    + VH 
Sbjct: 85  IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 144

Query: 296 HVLKMGYLGDSFISNALLAVYARGLKDMASAHKMFD--EMSDRDMACCWTSLIAGYAQMG 355
            V ++G+  D F+ N L+A+YA+  + + SA  +F+   + +R +   WT++++ YAQ G
Sbjct: 145 QVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIV-SWTAIVSAYAQNG 204

Query: 356 LAEKALLLFVMMIKENMQPEDDTMVSVLSACSKFHIAEIEKWVVELRRLVNKFDSKGSCC 415
              +AL +F  M K +++P+   +VSVL+A   F   +  K    +   V K   +    
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNA---FTCLQDLKQGRSIHASVVKMGLEIE-- 264

Query: 416 DSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGFPVEALALFRLMV 475
             + I L  +Y K G +  ++  F++ +   ++++WN+MI+ Y +NG+  EA+ +F  M+
Sbjct: 265 PDLLISLNTMYAKCGQVATAKILFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 324

Query: 476 ENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLECGGRRGIIASNKMLATALIDMYCK 535
            N   +P+ +++ + +SACAQ+G L+    ++E +     R     +  +++ALIDM+ K
Sbjct: 325 -NKDVRPDTISITSAISACAQVGSLEQARSMYEYV----GRSDYRDDVFISSALIDMFAK 384

Query: 536 SGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGL 595
            GS+E A+ VF + +++DV+ ++AMI+G  ++G+  EA+ L+  M+   + P   TF+GL
Sbjct: 385 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 444

Query: 596 LSACSHSGFLEQGRQIFIEMTTRYLILPSLEHYACYIDLLARAGHFDDALEVVSTMPFEP 655
           L AC+HSG + +G   F  M   + I P  +HYAC IDLL RAGH D A EV+  MP +P
Sbjct: 445 LMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 504

Query: 656 NNFVWSSLLRGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRW 715
              VW +LL  C  H   EL +Y +++L  +DP N+  YV  +N +A    WD V+ +R 
Sbjct: 505 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 564

Query: 716 FMREKGIRKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNVLEKQMK 759
            M+EKG+ K  G SW+ + G +  F    KSHP  + +   +  +E ++K
Sbjct: 565 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038888799.10.0e+0092.30pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin... [more]
TYK06804.10.0e+0091.09pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008455016.10.0e+0091.09PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... [more]
KAA0031351.10.0e+0090.92pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_031744265.10.0e+0090.83pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ... [more]
Match NameE-valueIdentityDescription
Q9LN012.9e-10034.82Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9SR825.6e-9634.36Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... [more]
O823801.5e-9332.32Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LTV82.1e-9033.73Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9LS722.1e-9033.16Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5D3C6A40.0e+0091.09Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BZG80.0e+0091.09pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... [more]
A0A5A7SP640.0e+0090.92Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0K4I30.0e+0090.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1[more]
A0A6J1GKT09.0e-30787.13pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... [more]
Match NameE-valueIdentityDescription
AT1G08070.12.0e-10134.82Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G08820.14.0e-9734.36Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G29760.11.1e-9432.32Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G29230.11.5e-9133.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G12770.11.5e-9133.73mitochondrial editing factor 22 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 314..410
e-value: 8.4E-12
score: 47.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 411..497
e-value: 1.0E-15
score: 59.6
coord: 184..313
e-value: 9.2E-10
score: 40.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 515..740
e-value: 1.2E-37
score: 131.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 511..685
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 548..581
e-value: 8.7E-7
score: 26.7
coord: 443..476
e-value: 6.9E-8
score: 30.2
coord: 336..367
e-value: 3.5E-5
score: 21.7
coord: 520..546
e-value: 2.0E-4
score: 19.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 336..364
e-value: 1.1E-5
score: 25.4
coord: 415..438
e-value: 0.72
score: 10.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 545..593
e-value: 1.4E-9
score: 38.0
coord: 229..277
e-value: 2.9E-7
score: 30.6
coord: 440..488
e-value: 8.4E-9
score: 35.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 515..545
score: 8.659485
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 9.930995
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 546..580
score: 11.871145
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 333..367
score: 9.536388
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 11..84
e-value: 1.8E-7
score: 31.0
NoneNo IPR availablePANTHERPTHR47925:SF67SUBFAMILY NOT NAMEDcoord: 179..759
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 179..759

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G110710.1CaUC06G110710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1900865 chloroplast RNA modification
biological_process GO:0016556 mRNA modification
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding