CaUC06G110480 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G110480
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
LocationCiama_Chr06: 4776887 .. 4782882 (-)
RNA-Seq ExpressionCaUC06G110480
SyntenyCaUC06G110480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTCAAATACTCATGGAAGAGTTTCTCCATAATAGTTTCATCTTCTTCCCCAACTTGCATTATAGAGCTTCAAATCATGCCTCAATTCTTCCCTTTTTTCTTTTGCAATAATCACATCTTTAAATATTCCACCATTTCCCTTACCCAATTTTACCCTACCTTGTTTCTTATGAAACACAATGGTTTTTCTGTCATGATTTTCAGTCTTTGTGAAAGCCTTGATCATCTCCTTGACCTTATATTTCTCACTTCTTCTGGTTAGTCTATCAAATTCTTTATTCTTATTATTTTTTTTTTTTTTAATTGTTTCTTGAGTTCTTTCTTGCAATTATTTTTGTACTAAACAAACTTTGTTATATCTCTTTAATTTAGGTGATAATCAATGGCAAACTTACTTGCCTTTATTGCTATCTTATCAAGAATTTGATGTAGGAGTAATTAACTATGGAAGCTTTGTCTCAATTGATTCAGTACAATTCTTAGCATTTTTAATCATGTTATCGGATACTACATACGGTAATGTTATAATTTAATTATTAATAACTCAAATTGTTTTTGCCTAGTTCTCTAAGTAATTATCTTTGTTATATATAGTTACGGTCACTGTATGCAATTCACACGTCAAGTTGACTGGAGGAGGAGAGGATCCGGAGTACTTTATTCTTAGCCAACAGGTATTGTATCCATATATTAGTGATCGTTTAGGCCTCATTTGGTAATCATTTCATTTTTAGTTTAATTTGCATCTTTCTTGAGTGAATGTTTGGGAGTGATTTTGAAATTGTTAATTTATTATAGAAATTTACACTTTTATGATGCAATTCTTGTATCATCGAAATTGACTTTGAATGATCGAAAATATGTTTTATAACAATTTTGAAAATGATAAAAGTGATTTTGACCATTTGAAAATCACTTCCCAAACAAGCTCTAAGGAAAATAGTTGAATTCTTAGCCAAACATTTTTTTAAAAAACAAAAAGCTACTTTTTGTAGTTTTAAAACTTAGCTTAAAAAATTAGATAACAAAACAAAAAAATTTAGAAGGGGTATGATGAGGGTGCTAAAGAGGTGTCAACCTACTTGAAATGTCTCGGTGCACCCCCTAATCATCCAACTTACCTCTAGTAACTTATTCAAAGAATATATATACACACATAGAGAGAGAGAGGTAGAATGGATGTTTACCTGCTTAATTTTCAAAAATGAAAAACAAAAAATCAAATTATTACAAAATGAGACCTATATCACGAGTCATGAGTATATATTGGTTTTAGAGAGATAACATAAAGGAAATAAAATAACACAATATAAAACTTCTCCAACTAACCACTCTAAGTAATACAATAATATTAGTTTTCTATCGTATAGACTTGTATTGGTATTAGAGATATATTGATATGGACATCTATCAATATTGATCTATCACATATAGACTTGTATTGTTAGTTGAATTATACATGTACTATTGAAGTCTATTAGTGACTATCAATGTCTATCACTCATATAGGTTGTATTTTTTTGTTTTTTTTTTTTTTTAACTATATAGTTCTGTTGAAAGTTTATACATTGAGTCGATGACTAACTATTATTAATAGACTTATATGGTCACTTATAAATTATAGAATTATATTAGAGTAGTGAATTGTAATGTTGTGTACAGAGAGGAGAATGCATAATTGGAGGTGTTGCAGCAGGAGATGTAACTCAATTTGTCCTCATTTTCAATCCAATTCCATCTTTCTTCAATTTGATAAGTTGGCCAAAAGCAAAAAGAGTTTGGTTATTCAAATCAAATGATAATTTTCACGGTATAATCACTGTCCCTATTGATTTGTATGCTCGATATTTGCTCTATTCTACTTGAAGGAAATATAAAGGTCTCCTTTCTACTTTTTTGGATATTATTTGATATTCTTTCTTGTGTCAATAAAATTCAATGGGATGAAGATTATTGATAGTGAAAATGAACATATAATAATGCTATGATGCAATTACTTCTTGTCAAACTATATTTTGAATTTTAACATTTTGATTAAAGTGTGTGTGTGTGTGTATATATATATATATATCCAAATTAAATAGTGAATCGGCCTCAAAATCATTCTTTCATATCTATAGTAAACTTTGTTAATTAATGAGAGATAATTATACCATTTAGGTTCCCTTTGATTATTTTGTTTTTGGTTTTAAAATTTGTAATTTTTTTTCTCTTTACAATTTTTTTTCATCATTCCTAACTAAAAATTTGAATTTTTAGTCAAATTTTAATTATAAAATACTACATTTAAATTTTAAAAGTTTTCAAAACTTGGTTTGGCTTTTGAAAACAATCGTAAAAAGTATATAACATGATAAAGAAATCCATAAATAGAAGTAGTTTTCATAATCCTAATTTCTGAAACCAAATTAAATGGCCTATCTTTTTTCTACATGAAAGGTAAGATTTCTTCAAATGAAATAGATTAAGGTGTTACGTTTAGGATTGCTTTTGAAAGTGTTAAAAGTGATTATGTAAAAATATTAACTGCTTTGAGTGTTTGGTGAGATTGATTGTGAATAAATTTGTCAAAAATTATGTTAGTCTATGTAGTCATTTTCTTTAATCACAATGATTTAACATTATTTGCCAAACACTATCCATCTTTTTAGAGTTAAAGTTGAAATTACCAAACACTAATTTACTTCATTTTACAATTGATTTTGTTGAAAGTACATTTATCAACAACTATTTTACAAGTTATAACAACCCCAAAATAAGCCAAAAAGGGAAATAGGAAAAATTCACTCTAGAATTATAGAAGCGTTAAAACCACATGCATTGTTTTTAATAAAATACTAGAGTCGAGTGGGCTCAAGAGGTGCACTGGAATATCTCAACTAGGTTGACACATCCTTAGCACCCTCATCATACCCCATATTCAGTAAAACGATGAATTCAAAAAGGAAAATAGTACATTCAAATGTACAACAAAAACAAAAGCAAGGGATGAGCTCCAATGCAAAAGAGATGGGTAGAAGCTAGAGAAAGGCTTTCTAATTTAGTGCAATGGAAGATGCATCTTAATTACAAAAGAGAACAAATTTGGTACATCAAAGAGTAGCCAACGAAATAATGTCTTCCCATAAGTGATTAGGCGATTTTTCGGCGTCTTGGAAAGTAAAAAAACCACATGAATTTACCTACGTACTCTATTGCTATTCATAGAGTAGCAATAGCATTTCATGCAAGCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCAATCAATTTTTTTTTAAAAAAAAAAAAATTATATTGCACTACTCTTGCATTAAATTTAAAAATTTTGCAAATGCATTTAAATAATTAATTAAAAGAATTCTTTACAAATATAGCAAAATTTAATTTTCTATGATCGCGATAGACATGTATTTTACTATTAGTTGTAGATATCTTCAACAGTTTTGTCATTTAAGATAATTTTCCAAATTAAAATAGAAATATATTTTAAAGTGATTAATTTTTTAGGTAATTATTTTAAATGACAGAACTATTGAAAATATTTTTAAATATAACAAAATGTTTTTTTTTTTTTTTTTTATCACTATCTATCACTGATAAACAATAATATTTTATTATATTTGTAAATAAGTTAGCTGATTTTGTTATATTTAAAAACAATTTTATTTTAACAAAAATGCTTTTCCTATTATCTTATATATATATATGATACTATTACTTCAATTATTGAATTTAATTATAAGTAGCCTAAGTAGATGACCATAAAAATAGTATAGAAAACCGAAGTAGCTAGTAATTGACAAAGTAGGGTAATATAAAAGTAGGCAATGGTAATAATTGAAACCCCATTTGAAATCCATCACCAAAAATCACACCATGTTCTTAGTGAGACTTGAATTCTTTGATCCTCTTATGGATGCAACTTCTCGTTTTTCTCAAATTGCTAAAGAAGCCGATATCAAATTCACTCCATTAGACTTTTGGGTAATTGCTTCCAACCGATCCCCTCGCTTTGTCGCAGCCATTCAAATGTCCCACCATTGCTTCATCCACTACAATGTCGATGATGATCACACTTCAAGAATTTCCCTTGAATCCTTCCATGACGCTCTCTTGGATGGTGGAGCTTCTTCTTCAATGACCATTCATCTTCTCCAAAACATAAACCAAATGATGCTTAGATTCGAATCTTCAAGTTAGTATATACCTATAAATCAATCTTGGATTGTTCCAACAATAATCTTGTTTCTCTCTTTTTGTTCCAAGAACACACAACTTTTTTTTCTTTTTTTCTCTTTTTAATTTTTACTTTTTAGGTCATGTGCCACAAGTGCGTCATGAATTGACATTGACACCGTCACAAGAAGAGGATCTAGGAGAAGTTGATTATGCAAAATGTTTCTCAATTGATTCAAGGGAATTAAGACGTGTTATAACAGAATTACCTATCTTCCATGAGGACTCAAGTAAAACATGGGACTCTTCTTTTCTTAATTTAATAATTATATGTCTATTTCAAAAAAAATTAAAGTTGATTATGCAAAATGTTTATTTGTCATAGTATGTGTTACTGCAACCAGTTCACAAGTCAAATTCTCTATTGCTTCTGAAGCGATTATTCTTACCAAAGAGGTATTGTTCTAAAACTACTATTCGTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNAATTGCTAAAGAAGCCGATATCAAATTCACTCCATTAGACTTTTGGGTAATTGCTTCCAACCGATCCCCTCGCTTTGTCGCAGCCATTCAAATGTCCCACCATTGCTTCATCCACTACAATGTCGATGATGATCACACTTCAAGAATTTCCCTTGAATCCTTCCATGACGCTCTCTTGGATGGTGGAGCTTCTTCTTCAATGACCATTCATCTTCTCCAAAACATAAACCAAATGATGCTTAGATTCGAATCTTCAAGTTAGTATATACCTATAAATCAATCTTGGATTGTTCCAACAATAATCTTGTTTCTCTCTTTTTGTTCCAAGAACACACAACTTTTTTTTCTTTTTTTCTCTTTTTAATTTTTACTTTTTAGGTCATGTGCCACAAGTGCGTCATGAATTGACATTGACACCGTCACAAGAAGAGGATCTAGGAGAAGTTGATTATGCAAAATGTTTCTCAATTGATTCAAGGGAATTAAGACGTGTTATAACAGAATTACCTATCTTCCATGAGGACTCAAGTAAAACATGGGACTCTTCTTTTCTTAATTTAATAATTATATGTCTATTTCAAAAAAAATTAAAGTTGATTATGCAAAATGTTTATTTGTCATAGTATGTGTTACTGCAACCAGTTCACAAGTCAAATTCTCTATTGCTTCTGAAGCGATTATTCTTACCAAAGAGGTATTGTTCTAAAACTACTATTCGTAAGTTTTTTTTTTTTTTTTTTATTTTTTTTTTATTTTTTAGAGTATATGCTTCAATATGGCCAAACATGATTTTTTTGAATTTTTTTTAACGATTCTTTAATTTAAAAAAAATCTTTATTTTAAATGTTAGATTTAAACATTCTTTGTTTTATTTTAAAATTTATTGCTTATTTTATTTGCATGATGTTCGTTCTTGAAATTTGGGTAAACAATCATTGTAGTGTCCATTTGGATTAACTTGAGAGAAAAATGTTTTTCAAAAAACTCATTTTTATTTAAACTTTTTATAAAAGTAGTTTAAAATACACTTTAAAATCTAAAATGAGTAGTCTTTGTGTAAAGTTTAGAAACTAAAACGAAATATTTATGCTTTGTGTCGTGTTTGGTTTTTTTTTTTTAAAATTAAGTCTATTTTGATCGTTTAATTTAGGAGTAGAAATTGATAGTTGATGTTGTGCAGGGTGGGGAATGTTCAATTGTAGGTTATGAGGAAGAAGATGAAATTGAAATCAGAATCAATCTGA

mRNA sequence

ATGAATTTCAAATACTCATGGAAGAGTTTCTCCATAATAGTTTCATCTTCTTCCCCAACTTGCATTATAGAGCTTCAAATCATGCCTCAATTCTTCCCTTTTTTCTTTTGCAATAATCACATCTTTAAATATTCCACCATTTCCCTTACCCAATTTTACCCTACCTTGTTTCTTATGAAACACAATGGTTTTTCTGTCATGATTTTCAGTCTTTGTGAAAGCCTTGATCATCTCCTTGACCTTATATTTCTCACTTCTTCTGGTGATAATCAATGGCAAACTTACTTGCCTTTATTGCTATCTTATCAAGAATTTGATGTAGGAGTAATTAACTATGGAAGCTTTGTCTCAATTGATTCAGTACAATTCTTAGCATTTTTAATCATGTTATCGGATACTACATACGTTACGGTCACTGTATGCAATTCACACGTCAAGTTGACTGGAGGAGGAGAGGATCCGGAGTACTTTATTCTTAGCCAACAGAGAGGAGAATGCATAATTGGAGGTGTTGCAGCAGGAGATGTAACTCAATTTGTCCTCATTTTCAATCCAATTCCATCTTTCTTCAATTTGATAAGTTGGCCAAAAGCAAAAAGAGTTTGGTTATTCAAATCAAATGATAATTTTCACGCCATTCAAATGTCCCACCATTGCTTCATCCACTACAATGTCGATGATGATCACACTTCAAGAATTTCCCTTGAATCCTTCCATGACGCTCTCTTGGATGGTGGAGCTTCTTCTTCAATGACCATTCATCTTCTCCAAAACATAAACCAAATGATGCTTAGATTCGAATCTTCAAGTCATGTGCCACAAGTGCGTCATGAATTGACATTGACACCGTCACAAGAAGAGGATCTAGGAGAAGTTGATTATGCAAAATGTTTCTCAATTGATTCAAGGGAATTAAGACGTGTTATAACAGAATTACCTATCTTCCATGAGGACTCAATATGTGTTACTGCAACCAGTTCACAAGTCAAATTCTCTATTGCTTCTGAAGCGATTATTCTTACCAAAGAGGTTATGAGGAAGAAGATGAAATTGAAATCAGAATCAATCTGA

Coding sequence (CDS)

ATGAATTTCAAATACTCATGGAAGAGTTTCTCCATAATAGTTTCATCTTCTTCCCCAACTTGCATTATAGAGCTTCAAATCATGCCTCAATTCTTCCCTTTTTTCTTTTGCAATAATCACATCTTTAAATATTCCACCATTTCCCTTACCCAATTTTACCCTACCTTGTTTCTTATGAAACACAATGGTTTTTCTGTCATGATTTTCAGTCTTTGTGAAAGCCTTGATCATCTCCTTGACCTTATATTTCTCACTTCTTCTGGTGATAATCAATGGCAAACTTACTTGCCTTTATTGCTATCTTATCAAGAATTTGATGTAGGAGTAATTAACTATGGAAGCTTTGTCTCAATTGATTCAGTACAATTCTTAGCATTTTTAATCATGTTATCGGATACTACATACGTTACGGTCACTGTATGCAATTCACACGTCAAGTTGACTGGAGGAGGAGAGGATCCGGAGTACTTTATTCTTAGCCAACAGAGAGGAGAATGCATAATTGGAGGTGTTGCAGCAGGAGATGTAACTCAATTTGTCCTCATTTTCAATCCAATTCCATCTTTCTTCAATTTGATAAGTTGGCCAAAAGCAAAAAGAGTTTGGTTATTCAAATCAAATGATAATTTTCACGCCATTCAAATGTCCCACCATTGCTTCATCCACTACAATGTCGATGATGATCACACTTCAAGAATTTCCCTTGAATCCTTCCATGACGCTCTCTTGGATGGTGGAGCTTCTTCTTCAATGACCATTCATCTTCTCCAAAACATAAACCAAATGATGCTTAGATTCGAATCTTCAAGTCATGTGCCACAAGTGCGTCATGAATTGACATTGACACCGTCACAAGAAGAGGATCTAGGAGAAGTTGATTATGCAAAATGTTTCTCAATTGATTCAAGGGAATTAAGACGTGTTATAACAGAATTACCTATCTTCCATGAGGACTCAATATGTGTTACTGCAACCAGTTCACAAGTCAAATTCTCTATTGCTTCTGAAGCGATTATTCTTACCAAAGAGGTTATGAGGAAGAAGATGAAATTGAAATCAGAATCAATCTGA

Protein sequence

MNFKYSWKSFSIIVSSSSPTCIIELQIMPQFFPFFFCNNHIFKYSTISLTQFYPTLFLMKHNGFSVMIFSLCESLDHLLDLIFLTSSGDNQWQTYLPLLLSYQEFDVGVINYGSFVSIDSVQFLAFLIMLSDTTYVTVTVCNSHVKLTGGGEDPEYFILSQQRGECIIGGVAAGDVTQFVLIFNPIPSFFNLISWPKAKRVWLFKSNDNFHAIQMSHHCFIHYNVDDDHTSRISLESFHDALLDGGASSSMTIHLLQNINQMMLRFESSSHVPQVRHELTLTPSQEEDLGEVDYAKCFSIDSRELRRVITELPIFHEDSICVTATSSQVKFSIASEAIILTKEVMRKKMKLKSESI
Homology
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BLAST of CaUC06G110480 vs. NCBI nr
Match: XP_016903187.1 (PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 3.8e-52
Identity = 112/157 (71.34%), Postives = 130/157 (82.80%), Query Frame = 0 

Query: 187 PSFFNLISWPKAKRVWLFKSNDNFHAIQMSHHCFIHYNVDDDHTSRISLESFHDALLDGG 246
           P FF++I+  ++ R   +        +QM+HHCFI+Y VD+DHTSRISLESFHDALLDGG
Sbjct: 34  PLFFSIIASNRSPRFVAY--------LQMTHHCFINYKVDNDHTSRISLESFHDALLDGG 93

Query: 247 ASSSMTIHLLQNINQMMLRFESSSHVPQVRHELTLTPSQEEDLGEVDYAKCFSIDSRELR 306
           AS SMTIHLL NI Q++LRFESSSH P+V HEL+LTPSQEEDLGEVDYAK FSIDS++LR
Sbjct: 94  ASPSMTIHLLANIKQLILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLR 153

Query: 307 RVITELPIFHEDSICVTATSSQVKFSIASEAIILTKE 344
           RVI  LPIFH DSICVTAT SQVKFSIAS+ I+LTKE
Sbjct: 154 RVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKE 182

[Close]
BLAST of CaUC06G110480 vs. NCBI nr
Match: XP_031744160.1 (uncharacterized protein LOC116404808 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 3.0e-49
Identity = 105/129 (81.40%), Postives = 116/129 (89.92%), Query Frame = 0 

Query: 215 MSHHCFIHYNVDDDHTSRISLESFHDALLDGGASSSMTIHLLQNINQMMLRFESSSHVPQ 274
           M+++CFI+Y VD+DHTSRISLESFHDALLDGG S SMTIHLL NINQM+LRFESSSH PQ
Sbjct: 52  MTYNCFINYKVDNDHTSRISLESFHDALLDGGGSPSMTIHLLANINQMILRFESSSHAPQ 111

Query: 275 VRHELTLTPSQEEDLGEVDYAKCFSIDSRELRRVITELPIFHEDSICVTATSSQVKFSIA 334
           VRHEL+L PSQEEDLGE+DYAK FSIDS+ LRRVI  LPIFH DSICVTAT SQVKFSIA
Sbjct: 112 VRHELSLKPSQEEDLGEIDYAKFFSIDSKALRRVIRNLPIFHGDSICVTATRSQVKFSIA 171

Query: 335 SEAIILTKE 344
           S+ I+LTKE
Sbjct: 172 SKEIVLTKE 180

[Close]
BLAST of CaUC06G110480 vs. NCBI nr
Match: XP_023549339.1 (uncharacterized protein LOC111807722 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.6 bits (475), Expect = 1.9e-43
Identity = 109/214 (50.93%), Postives = 136/214 (63.55%), Query Frame = 0 

Query: 1   MNFKYSWKSFSIIVSSSSPT-CIIELQIMPQFFPFFFCNNHIFKYSTISLTQFYPTLFLM 60
           M+FK S    ++IVS  SPT  IIELQ MPQFF  FFCN     +S++S+  +Y  LF M
Sbjct: 1   MDFKCSKAKLTVIVSRPSPTPSIIELQTMPQFFTHFFCNKPF--HSSMSVNDYYDILFDM 60

Query: 61  KHNGFSVMIFSLCESLDHLLDLIFLTSSGDNQWQTYLPLLLSYQEFDVGVINYGSFVSID 120
           K   F ++  S  E  +  L  IF + S  +  +  LPLLL+++EFDVGVINYG FVSID
Sbjct: 61  KQTDFDLIAMSHWEG-NAYLKFIFFSPSRCDGCEALLPLLLAHEEFDVGVINYGIFVSID 120

Query: 121 SVQFLAFLIMLSDTTYVTVTVCNSHVKLTGGGEDPEYFILSQQRGECIIGGVAAGDVTQF 180
             +F  F + L+D T+VTVT+ NS VK + GGE+   F L Q+R ECIIGGV  GD TQF
Sbjct: 121 LRKFTLFGMFLNDATHVTVTISNSEVKFSRGGEE---FTLEQERKECIIGGVEEGDETQF 180

Query: 181 VLIFNPIPSFFNLISWPKAKRVWLFKSNDNFHAI 214
            +I N    F NL  W KAKRVW FKSNDN H +
Sbjct: 181 EIITNETEFFNNLSRWSKAKRVWFFKSNDNGHGV 208

[Close]
BLAST of CaUC06G110480 vs. NCBI nr
Match: XP_022959354.1 (uncharacterized protein LOC111460352 isoform X1 [Cucurbita moschata])

HSP 1 Score: 180.3 bits (456), Expect = 3.0e-41
Identity = 105/214 (49.07%), Postives = 133/214 (62.15%), Query Frame = 0 

Query: 1   MNFKYSWKSFSIIVSSSSPT-CIIELQIMPQFFPFFFCNNHIFKYSTISLTQFYPTLFLM 60
           M+FK S    ++IVS  SPT  IIELQ MPQFF  F CN     +S++S+  +Y  LF M
Sbjct: 29  MDFKCSKAKLTVIVSRPSPTPSIIELQTMPQFFTHFLCNKPF--HSSMSVNDYYDILFDM 88

Query: 61  KHNGFSVMIFSLCESLDHLLDLIFLTSSGDNQWQTYLPLLLSYQEFDVGVINYGSFVSID 120
           K   F ++  S  E  +  L  IF + S  +  + +LPLLL+++E DVGVINYG FVSID
Sbjct: 89  KQTDFDLIAMSHWEG-NAYLKFIFSSPSRCDGCEAFLPLLLAHEEVDVGVINYGIFVSID 148

Query: 121 SVQFLAFLIMLSDTTYVTVTVCNSHVKLTGGGEDPEYFILSQQRGECIIGGVAAGDVTQF 180
             +F  F   L+D T+V VT+ NS  K +GGGE+   F L Q++ ECIIGGV  GD TQF
Sbjct: 149 LRKFTLFGTFLNDATHVMVTISNSKAKFSGGGEE---FTLEQEKKECIIGGVEEGDETQF 208

Query: 181 VLIFNPIPSFFNLISWPKAKRVWLFKSNDNFHAI 214
            +I N    F NL  W KAKRVW FKSNDN H +
Sbjct: 209 EIITNETEFFNNLSRWSKAKRVWFFKSNDNGHGV 236

[Close]
BLAST of CaUC06G110480 vs. NCBI nr
Match: XP_023000630.1 (uncharacterized protein LOC111494874 [Cucurbita maxima])

HSP 1 Score: 162.5 bits (410), Expect = 6.5e-36
Identity = 82/154 (53.25%), Postives = 115/154 (74.68%), Query Frame = 0 

Query: 191 NLISWPKAKRVWLFKSNDNFHA-IQMSHHCFIHYNVDDDHTSRISLESFHDALLDGGASS 250
           ++I  P + ++   + +  F A +Q+ H CF  Y+V+ DH SRISLES HDALLD G+SS
Sbjct: 30  DIIFTPLSLKLTTSRPSPRFIATLQIFHQCFTVYSVNIDHCSRISLESLHDALLDCGSSS 89

Query: 251 SMTIHLLQNINQMMLRFESSSHVPQVRHELTLTPSQEEDLGEVDYAKCFSIDSRELRRVI 310
           +MTIHLL+N N M+LRFE+ +H PQ+RH+  L P QE+ + E++Y+K  ++DSR+LR+VI
Sbjct: 90  AMTIHLLENTNLMVLRFETPNHEPQLRHDFVLLPPQEQSIEEIEYSKSLALDSRDLRQVI 149

Query: 311 TELPIFHEDSICVTATSSQVKFSIASEAIILTKE 344
            ELP+FH DS+CVT TSS+V+FSIAS  +I  KE
Sbjct: 150 KELPLFHGDSVCVTVTSSRVRFSIASRELIFKKE 183

[Close]
BLAST of CaUC06G110480 vs. ExPASy TrEMBL
Match: A0A1S4E4N8 (uncharacterized protein LOC103502263 OS=Cucumis melo OX=3656 GN=LOC103502263 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-52
Identity = 112/157 (71.34%), Postives = 130/157 (82.80%), Query Frame = 0 

Query: 187 PSFFNLISWPKAKRVWLFKSNDNFHAIQMSHHCFIHYNVDDDHTSRISLESFHDALLDGG 246
           P FF++I+  ++ R   +        +QM+HHCFI+Y VD+DHTSRISLESFHDALLDGG
Sbjct: 34  PLFFSIIASNRSPRFVAY--------LQMTHHCFINYKVDNDHTSRISLESFHDALLDGG 93

Query: 247 ASSSMTIHLLQNINQMMLRFESSSHVPQVRHELTLTPSQEEDLGEVDYAKCFSIDSRELR 306
           AS SMTIHLL NI Q++LRFESSSH P+V HEL+LTPSQEEDLGEVDYAK FSIDS++LR
Sbjct: 94  ASPSMTIHLLANIKQLILRFESSSHAPKVHHELSLTPSQEEDLGEVDYAKFFSIDSKDLR 153

Query: 307 RVITELPIFHEDSICVTATSSQVKFSIASEAIILTKE 344
           RVI  LPIFH DSICVTAT SQVKFSIAS+ I+LTKE
Sbjct: 154 RVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKE 182

[Close]
BLAST of CaUC06G110480 vs. ExPASy TrEMBL
Match: A0A6J1H7T7 (uncharacterized protein LOC111460352 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460352 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 105/214 (49.07%), Postives = 133/214 (62.15%), Query Frame = 0 

Query: 1   MNFKYSWKSFSIIVSSSSPT-CIIELQIMPQFFPFFFCNNHIFKYSTISLTQFYPTLFLM 60
           M+FK S    ++IVS  SPT  IIELQ MPQFF  F CN     +S++S+  +Y  LF M
Sbjct: 29  MDFKCSKAKLTVIVSRPSPTPSIIELQTMPQFFTHFLCNKPF--HSSMSVNDYYDILFDM 88

Query: 61  KHNGFSVMIFSLCESLDHLLDLIFLTSSGDNQWQTYLPLLLSYQEFDVGVINYGSFVSID 120
           K   F ++  S  E  +  L  IF + S  +  + +LPLLL+++E DVGVINYG FVSID
Sbjct: 89  KQTDFDLIAMSHWEG-NAYLKFIFSSPSRCDGCEAFLPLLLAHEEVDVGVINYGIFVSID 148

Query: 121 SVQFLAFLIMLSDTTYVTVTVCNSHVKLTGGGEDPEYFILSQQRGECIIGGVAAGDVTQF 180
             +F  F   L+D T+V VT+ NS  K +GGGE+   F L Q++ ECIIGGV  GD TQF
Sbjct: 149 LRKFTLFGTFLNDATHVMVTISNSKAKFSGGGEE---FTLEQEKKECIIGGVEEGDETQF 208

Query: 181 VLIFNPIPSFFNLISWPKAKRVWLFKSNDNFHAI 214
            +I N    F NL  W KAKRVW FKSNDN H +
Sbjct: 209 EIITNETEFFNNLSRWSKAKRVWFFKSNDNGHGV 236

[Close]
BLAST of CaUC06G110480 vs. ExPASy TrEMBL
Match: A0A6J1KIW5 (uncharacterized protein LOC111494874 OS=Cucurbita maxima OX=3661 GN=LOC111494874 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.2e-36
Identity = 82/154 (53.25%), Postives = 115/154 (74.68%), Query Frame = 0 

Query: 191 NLISWPKAKRVWLFKSNDNFHA-IQMSHHCFIHYNVDDDHTSRISLESFHDALLDGGASS 250
           ++I  P + ++   + +  F A +Q+ H CF  Y+V+ DH SRISLES HDALLD G+SS
Sbjct: 30  DIIFTPLSLKLTTSRPSPRFIATLQIFHQCFTVYSVNIDHCSRISLESLHDALLDCGSSS 89

Query: 251 SMTIHLLQNINQMMLRFESSSHVPQVRHELTLTPSQEEDLGEVDYAKCFSIDSRELRRVI 310
           +MTIHLL+N N M+LRFE+ +H PQ+RH+  L P QE+ + E++Y+K  ++DSR+LR+VI
Sbjct: 90  AMTIHLLENTNLMVLRFETPNHEPQLRHDFVLLPPQEQSIEEIEYSKSLALDSRDLRQVI 149

Query: 311 TELPIFHEDSICVTATSSQVKFSIASEAIILTKE 344
            ELP+FH DS+CVT TSS+V+FSIAS  +I  KE
Sbjct: 150 KELPLFHGDSVCVTVTSSRVRFSIASRELIFKKE 183

[Close]
BLAST of CaUC06G110480 vs. ExPASy TrEMBL
Match: A0A6J1HGU2 (uncharacterized protein LOC111464209 OS=Cucurbita moschata OX=3662 GN=LOC111464209 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-34
Identity = 77/131 (58.78%), Postives = 102/131 (77.86%), Query Frame = 0 

Query: 213 IQMSHHCFIHYNVDDDHTSRISLESFHDALLDGGASSSMTIHLLQNINQMMLRFESSSHV 272
           +Q+ H CF  Y+V+ DH SRISLES HDALLD G+SSSMTIHLL+N N M LRFE+ +H 
Sbjct: 53  LQIFHQCFTVYSVNIDHRSRISLESLHDALLDCGSSSSMTIHLLENTNLMALRFETPNHE 112

Query: 273 PQVRHELTLTPSQEEDLGEVDYAKCFSIDSRELRRVITELPIFHEDSICVTATSSQVKFS 332
           PQ+RH++ L P QE+ + E++Y+K  ++D R+LR+VI ELP+F  DS+CVT TSS+V+FS
Sbjct: 113 PQLRHDVVLLPPQEQSIEEIEYSKSLALDPRDLRQVIKELPLFSGDSVCVTVTSSRVRFS 172

Query: 333 IASEAIILTKE 344
           IAS  +I  KE
Sbjct: 173 IASRELIFKKE 183

[Close]
BLAST of CaUC06G110480 vs. ExPASy TrEMBL
Match: A0A1S3C8J1 (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.0e-34
Identity = 77/132 (58.33%), Postives = 104/132 (78.79%), Query Frame = 0 

Query: 213 IQMSHHCFIHYNVDDDHTSRISLESFHDALLDGGASSSMTIHLLQNINQMMLRFESSSH- 272
           +Q+S   F +++VD + +S++SL+ FHDA+LDGG+ SSMTIHLL   NQM+LRFE+ SH 
Sbjct: 50  LQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHD 109

Query: 273 VPQVRHELTLTPSQEEDLGEVDYAKCFSIDSRELRRVITELPIFHEDSICVTATSSQVKF 332
           VP + HEL L+P Q E+LG+V+Y   F++ SRELRR+I ELP+FH+D++ VT T SQVKF
Sbjct: 110 VPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKF 169

Query: 333 SIASEAIILTKE 344
           SI S+ IILTKE
Sbjct: 170 SIQSKEIILTKE 181

The following BLAST results are available for this feature:
BLAST of CaUC06G110480 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903187.13.8e-5271.34PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo][more]
XP_031744160.13.0e-4981.40uncharacterized protein LOC116404808 [Cucumis sativus][more]
XP_023549339.11.9e-4350.93uncharacterized protein LOC111807722 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022959354.13.0e-4149.07uncharacterized protein LOC111460352 isoform X1 [Cucurbita moschata][more]
XP_023000630.16.5e-3653.25uncharacterized protein LOC111494874 [Cucurbita maxima][more]
BLAST of CaUC06G110480 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC06G110480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E4N81.8e-5271.34uncharacterized protein LOC103502263 OS=Cucumis melo OX=3656 GN=LOC103502263 PE=... [more]
A0A6J1H7T71.5e-4149.07uncharacterized protein LOC111460352 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KIW53.2e-3653.25uncharacterized protein LOC111494874 OS=Cucurbita maxima OX=3661 GN=LOC111494874... [more]
A0A6J1HGU21.3e-3458.78uncharacterized protein LOC111464209 OS=Cucurbita moschata OX=3662 GN=LOC1114642... [more]
A0A1S3C8J15.0e-3458.33uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=... [more]
BLAST of CaUC06G110480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.70.10.10coord: 205..355
e-value: 6.2E-14
score: 53.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G110480.1CaUC06G110480.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane