CaUC06G110230 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGATCTCTACGCTTTGGACTTCGATGGAGTTCTCTGCGATAGCTGCGGAGAAAGCTCTCTTTCTGCTGTCAAGGTTCGTCTCTTTCACTTTTCCTCTTTGCTTCTTTCTGAAAATGAATGAAAATTCCTCCCTCTGACAACAAAAATTGGACTCTAAACGAGTTTATACGACTATGTTATGCCAATGGGTAAGGATTCGTTCTATTCAATGATGTGAGTTTCTGACCTATGGATAGACTGGAGGTTTATAGATGTATTCGGTTGCATATAATTTGTTTATCCTGCAGTTGATGGGTGGTACTTGTGTTTTGTGCTTCTGTTTGAATGTTATCAGGCTGCTAAGGTAAGATGGCCTGGATTGTTCGACGATGTGGATTCCAGTTTGGAGAATTGGATTGTGGATCAGATGTACACGGTGAGTCTATCATTGCCCTTTAATTGTTTCGATCTGTTTGTTGGGAGATTTTCTTAACCCAAGTGACGTGAATCTGCCTCTCATAGAAATACATGGCAAATTTTATAGTGGGTTTGATGCACATTCTGTTTTTCTGTTCTCTTATAACAAATTAGAGTATATATATGAAATATTATTATAAATAGAAAAAATATCAAACTATTTACAAATATAGAAAAATTTCACTATCTATCAGCTATAGATTGCAATAGACTTCTACCGCGACAATAAAATTTTTCCATATTTGTAAATAGTTTGGCTCATTTTGCCCTGTATATATATATATATATATTCTGTAATCAAAAGTTCTAATTTTTTTTTAATAGTTAAAACATGAAAACTTGAACAAAAGGAAAAAAAGTGTTTCAATGTTTTAAATATAGCTCAATCACATTTAATGGTTGAAAGACATTTGGGAAAAAGAAGAAGAGAAATGGAGACTACGAAGAGAAAATTAGGGGCCAGGAGTTAAATTGACCTGGTGGTAATTAGTTGCAGACAAAAGATATAAGTTTCTATATACGTTGTTCTGGAAAAATAACTTTATGCTTTTTAAAATAAAATTTTTATAGATACATATTTGCACAACAATTTTTTTGAAAGTTCTCGTTTTCATATAGCTTGTATGCATAGATAAACTTTCTTCTATAACAATTGAAATTGGTTTTTTTTTCTAAATGTTAGGATTTGGAGTTATATTTTGTATAGTTAGTTTGTTGTGTTTGTCTCCATTTATTTGGCTGTCTTTTTGTATGCCTTTTTTAACTGTTTGCTTTGTTCAAAGCAAGCTCAATTTGTAATATGAAAAGAAAATTCGAGTGTGCAATAGCTTTATGTTTAAAGTCATTCAACCACGGGTCTTACAAACAATTTTCAGACCAAAATAGAGAACTGCTTTTCAAAACAGCACTGAAATAACTCCAAGTTCGTGTTCTCATATCTATCTCCCACCTTATACCCCTTTCTTCTTATTGTCAGAAACTCTGCATACTTCATAATTATACAAAAAATTTGTAATGTTTCAGGGCCATTTTTCTTGTATCAAAGAGAGAAGCCCCAAGAAATTTGATTAGCAGATAGAAGTTACCAATTAAACATTGTTAATATAACTAATGTCCTGTAATGTGGTAGGTCCGCCCTGTGGTTGAAACTGGATATGAGAATTTATTGCTGGTGAGGTTGCTGTTGGAGATGAGATTACCCTCAATTAGGAAGTCTTCGGTGGGTATATTTGCCCACAGTTCTGCTTCAGTTTGTAAAATCGGTTCTGTTGACATTCTTGGGAAATTGCAGACATTATATTTATTTTTCAATTAGAAAGGTTGCAGAAGGGCTCACAGTTCATGGAATATTGGAGAATTGGTCAAACCTCAAACCAATCATCATGGAAGAATGGGGAGAGAATAGAGATGCTCTCATAGACCTTTTCGGAAAGGTTAGAGATCAATGGATTGATGAGGACTTGACAACTTGGATCGGTGCAAATAGGTAATATGGACAAACTTTTCAAATGGAATAGGTATCTTGCTTCAAACTAATGATGGTTAAAGCCACTATAGGAATTTGAGCGCTTCTTTTTGGTAGCTTTTGTTTGAGCTCGAATATCTTGGCTGTCCAATTGACCTTCTCTCTTTATTGAGGAGGAGGAAGGCTGAGGTGTTGGGAGTTGAGAAATCTTTAAGCATTTATAATACTTGTTTCACAGTACTGTAGAATAACTTCAGGCTTATCCAGATGGGATAGTCCAAAAGTTAATTCCTATTTATTTCATGTTATTTTACGCCCAAATGATATTTAATATATTCGAGCTCTTCTTGAAGCTTCATAGAATGGAAATGTCAATTTTGAGTTCCAGTTGTCCTACTCCTAGCCTTTTCTTTTTTCTCCTGTTATATGAGTTCTAACTAAATTAAAACATGTTTACTGCCTTCCTCTCTCTCTAATAAGAGGATCAGAATCATATTGAGGAAATGAAAGGTCCTGACTGATGTTGGCATTCACTCTTGGTCAAGACTGGGATACTGTCAATTACCATATGCTAATTATTTCTACTTTTAGATTAGGAAAGCTATAGGCATTTGCTTAACATCCTGTACAGATTTTATCCAGGTGTTTCTGATGCTCTGAAGTTCGCAAGCTCAAGGATATACATAGTTACCACAAAGCAGGTTTGTTTGGTCCACACCTGATACATATCTTTACTAGGGGGTGATGTACATGTACAACCATCCCTTTAAGGTTACAAAAGTTAGTTCACTGAAATGCACCTTCTCACAAATCTCATGTTCTTCTATTTTATTTTCTTGATGCAGGGTCGATTTGCTGATGCTCTACTACGAGAACTTGCTGGAGTGACCATACCTCCAGAAAGAATATATGGTCTAGGAACGGGGTTAGTCCATTACTCCAGCGTAATCTTCACTAAAATATAGTTTTTTGCTACAAAATACATGTTGCCCTGACTTGTTTGACACATCATTCAAATTTAGTCCCTCTTTCCTTCTTAATTGACATTAATGATTTGTTTCAGTCCAAAGGTAGAAGTTTTAAAGATGCTCCAAAAGATGCCTGAGCACCAAGGATTGAAGCTGCAGTAAGATATATCACACAGCATATTTTCACTCATCATTCATAGCATTGGCCTTTACAAGTGCCATTATACATGTGTTACTCACTCTGATCTGTTCTCTCCTTTTGACTATTTATGAAAAAGAAAGTCCGAGAGAGAGAGAGGAAAAGAAAAAAAAAAACAACTAAGAATAGATGTGCGATAAGACTCAAATTCGGAAAAGTCTTATTCAATACAAAATTGGCCCTCAGGCAATTACAGACGCAGTTCCACGGAAGAACTAATCTTCTCCTGTCTCACACTCGAGAGAAAGAGAACAAACCCTGACCACCTACACTTTTCCCCAAAATGAATTCTAAACTGACTTTCCCCCCTGACACACATATAAACCCTCTCCTTCTATTTCCTAACCAACCGTGGGCCCACTCGATCCCAATTAGTTGCTGAAGACACACTTCCCACCACATAAGCAGTCCCTCTTTTACCCTTTCTACTATATTTCAACAGATTAGGAGGTCTAACAATGTGCTTTAAATGTGGCCAGTTTTGTGGAAGATCGATTGGCTACCCTAAAGAATGTCATCAAAGAGCCAGAATTAGATGGGTGGAATATATATCTGGGTACAACCCTTCTCTCTCTTTCAGTCTTTTCTTTTAAACATAATGATTCTTTCATTCTCCTTTGATGTACTTGATTCATTTTTTTAATCCATTCGTTCTTTTGAGAATGTTTTAGATGAAGGGTAAGAATCCACTAAGCAGACGTATAATCAAGAACAAAGGAATGACACTTACATGATGCTTCGTATTTATGTTATTTGCACTATTTACATTTTGGTCTTAGGATTTAAAGAAGAGCGCCATATAAACTCTATAAGGCACCTCTGACTCTATAATATGAAAATTTCTCTTTAATAAAACTATTCTCCACCTCTGTTTGTTGGATGTAGTTAAAATACTGTTAGTGAACCACATAAATCTCAAAGTCGATTCTCTAATGTTTTATGTTGTCTATTCAACTTTGATTGTGGATTTCTTAACAGAAGTTTTTAGCTTAGACTCTGTTACTAATAGCTGCACATGGGCGTTTGTTTGATAATCAATAATTTTGGGTTATTGAAAACAGTGGACTGGGGATATAACACACAGAAAGAGAGAGAGGAAGCAGCAGCGATTCAAAGGATTCAACTTCTTCAGCTATCTGACTTCAGTACGAAGCTCAAGTAG ATGGGAGATCTCTACGCTTTGGACTTCGATGGAGTTCTCTGCGATAGCTGCGGAGAAAGCTCTCTTTCTGCTGTCAAGGCTGCTAAGGTAAGATGGCCTGGATTGTTCGACGATGTGGATTCCAGTTTGGAGAATTGGATTGTGGATCAGATGTACACGGTCCGCCCTGTGGTTGAAACTGGATATGAGAATTTATTGCTGGTGAGGTTGCTGTTGGAGATGAGATTACCCTCAATTAGGAAGTCTTCGGTTGCAGAAGGGCTCACAGTTCATGGAATATTGGAGAATTGGTCAAACCTCAAACCAATCATCATGGAAGAATGGGGAGAGAATAGAGATGCTCTCATAGACCTTTTCGGAAAGGTTAGAGATCAATGGATTGATGAGGACTTGACAACTTGGATCGGTGCAAATAGATTTTATCCAGGTGTTTCTGATGCTCTGAAGTTCGCAAGCTCAAGGATATACATAGTTACCACAAAGCAGGGTCGATTTGCTGATGCTCTACTACGAGAACTTGCTGGAGTGACCATACCTCCAGAAAGAATATATGGTCTAGGAACGGGTCCAAAGGTAGAAGTTTTAAAGATGCTCCAAAAGATGCCTGAGCACCAAGGATTGAAGCTGCATTTTGTGGAAGATCGATTGGCTACCCTAAAGAATGTCATCAAAGAGCCAGAATTAGATGGGTGGAATATATATCTGGTGGACTGGGGATATAACACACAGAAAGAGAGAGAGGAAGCAGCAGCGATTCAAAGGATTCAACTTCTTCAGCTATCTGACTTCAGTACGAAGCTCAAGTAG ATGGGAGATCTCTACGCTTTGGACTTCGATGGAGTTCTCTGCGATAGCTGCGGAGAAAGCTCTCTTTCTGCTGTCAAGGCTGCTAAGGTAAGATGGCCTGGATTGTTCGACGATGTGGATTCCAGTTTGGAGAATTGGATTGTGGATCAGATGTACACGGTCCGCCCTGTGGTTGAAACTGGATATGAGAATTTATTGCTGGTGAGGTTGCTGTTGGAGATGAGATTACCCTCAATTAGGAAGTCTTCGGTTGCAGAAGGGCTCACAGTTCATGGAATATTGGAGAATTGGTCAAACCTCAAACCAATCATCATGGAAGAATGGGGAGAGAATAGAGATGCTCTCATAGACCTTTTCGGAAAGGTTAGAGATCAATGGATTGATGAGGACTTGACAACTTGGATCGGTGCAAATAGATTTTATCCAGGTGTTTCTGATGCTCTGAAGTTCGCAAGCTCAAGGATATACATAGTTACCACAAAGCAGGGTCGATTTGCTGATGCTCTACTACGAGAACTTGCTGGAGTGACCATACCTCCAGAAAGAATATATGGTCTAGGAACGGGTCCAAAGGTAGAAGTTTTAAAGATGCTCCAAAAGATGCCTGAGCACCAAGGATTGAAGCTGCATTTTGTGGAAGATCGATTGGCTACCCTAAAGAATGTCATCAAAGAGCCAGAATTAGATGGGTGGAATATATATCTGGTGGACTGGGGATATAACACACAGAAAGAGAGAGAGGAAGCAGCAGCGATTCAAAGGATTCAACTTCTTCAGCTATCTGACTTCAGTACGAAGCTCAAGTAG MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDDVDSSLENWIVDQMYTVRPVVETGYENLLLVRLLLEMRLPSIRKSSVAEGLTVHGILENWSNLKPIIMEEWGENRDALIDLFGKVRDQWIDEDLTTWIGANRFYPGVSDALKFASSRIYIVTTKQGRFADALLRELAGVTIPPERIYGLGTGPKVEVLKMLQKMPEHQGLKLHFVEDRLATLKNVIKEPELDGWNIYLVDWGYNTQKEREEAAAIQRIQLLQLSDFSTKLK Homology
BLAST of CaUC06G110230 vs. NCBI nr
Match: XP_008458208.1 (PREDICTED: uncharacterized protein LOC103497707 [Cucumis melo] >TYK03021.1 Ribosomal RNA small subunit methyltransferase G [Cucumis melo var. makuwa]) HSP 1 Score: 538.5 bits (1386), Expect = 3.3e-149 Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 0
BLAST of CaUC06G110230 vs. NCBI nr
Match: XP_004138497.1 (uncharacterized protein LOC101221288 isoform X2 [Cucumis sativus] >KGN45668.1 hypothetical protein Csa_004919 [Cucumis sativus]) HSP 1 Score: 537.0 bits (1382), Expect = 9.6e-149 Identity = 261/268 (97.39%), Postives = 265/268 (98.88%), Query Frame = 0
BLAST of CaUC06G110230 vs. NCBI nr
Match: XP_038875625.1 (uncharacterized protein LOC120068027 [Benincasa hispida]) HSP 1 Score: 536.2 bits (1380), Expect = 1.6e-148 Identity = 260/268 (97.01%), Postives = 265/268 (98.88%), Query Frame = 0
BLAST of CaUC06G110230 vs. NCBI nr
Match: XP_022959351.1 (uncharacterized protein LOC111460350 isoform X1 [Cucurbita moschata] >KAG6575181.1 hypothetical protein SDJN03_25820, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013746.1 hypothetical protein SDJN02_23913 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 532.3 bits (1370), Expect = 2.4e-147 Identity = 259/268 (96.64%), Postives = 263/268 (98.13%), Query Frame = 0
BLAST of CaUC06G110230 vs. NCBI nr
Match: XP_023006636.1 (uncharacterized protein LOC111499303 isoform X1 [Cucurbita maxima] >XP_023547657.1 uncharacterized protein LOC111806534 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 531.9 bits (1369), Expect = 3.1e-147 Identity = 259/268 (96.64%), Postives = 263/268 (98.13%), Query Frame = 0
BLAST of CaUC06G110230 vs. ExPASy TrEMBL
Match: A0A5D3BTH5 (Ribosomal RNA small subunit methyltransferase G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001160 PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 1.6e-149 Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 0
BLAST of CaUC06G110230 vs. ExPASy TrEMBL
Match: A0A1S3C7X7 (uncharacterized protein LOC103497707 OS=Cucumis melo OX=3656 GN=LOC103497707 PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 1.6e-149 Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 0
BLAST of CaUC06G110230 vs. ExPASy TrEMBL
Match: A0A0A0K857 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004590 PE=4 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 4.6e-149 Identity = 261/268 (97.39%), Postives = 265/268 (98.88%), Query Frame = 0
BLAST of CaUC06G110230 vs. ExPASy TrEMBL
Match: A0A6J1H4M1 (uncharacterized protein LOC111460350 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460350 PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147 Identity = 259/268 (96.64%), Postives = 263/268 (98.13%), Query Frame = 0
BLAST of CaUC06G110230 vs. ExPASy TrEMBL
Match: A0A6J1KYA6 (uncharacterized protein LOC111499303 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499303 PE=4 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147 Identity = 259/268 (96.64%), Postives = 263/268 (98.13%), Query Frame = 0
BLAST of CaUC06G110230 vs. TAIR 10
Match: AT2G45990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). ) HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-130 Identity = 221/268 (82.46%), Postives = 244/268 (91.04%), Query Frame = 0
BLAST of CaUC06G110230 vs. TAIR 10
Match: AT2G45990.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). ) HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-130 Identity = 221/268 (82.46%), Postives = 244/268 (91.04%), Query Frame = 0
BLAST of CaUC06G110230 vs. TAIR 10
Match: AT2G45990.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-124 Identity = 215/268 (80.22%), Postives = 239/268 (89.18%), Query Frame = 0
BLAST of CaUC06G110230 vs. TAIR 10
Match: AT2G45990.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 369.0 bits (946), Expect = 3.2e-102 Identity = 176/209 (84.21%), Postives = 193/209 (92.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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