CaUC06G110130 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G110130
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	pollen-specific leucine-rich repeat extensin-like protein 3
Location	Ciama_Chr06: 4415374 .. 4415974 (+)
RNA-Seq Expression	CaUC06G110130
Synteny	CaUC06G110130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCTGAGGAGATCCATTTGATCAATCTTCATGGCCGAGATATAGGTCTTAGCAATCTCAAGTGACCTCTCCACCTGAATCAATTGAACCACCAGTTCACTCACCACCACCCCCCGTTCACTCACCACCACCACAGTTCATTCCCCACCACCCCCGGCCCATTCTTCTGCACCACCAGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCATTAGTCCACTCCCCACCACCCTCTATTCACTCTCTACCACCACCTGTCTCCTCTCCTCCACCACTAGTTCATTCCCCACCTCCTCCTGTTCACTCTCCACAAGCACTGGTCCACTCCCCACCTTTACCAGTCCACTCACCACCACACCTCGTCCATTCTCCACCGCCACCTATCGACTTCCACCCACCCTCTGTCCATTCTCCACTACCACCTGTTTACTCCCCACTACCACCAATCCAATCTCCACCACCTCTGACTGTGTCTTCTCCTTCTCCTCCTCCTAATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCACCAAATATCGTCTTCCAATACGTATCACCTTCTCCACCACAGTTTTCTGGCTATTGA

mRNA sequence

ATGACTCCTGAGGAGATCCATTTGATCAATCTTCATGGCCGAGATATAGTTCATTCCCCACCTCCTCCTGTTCACTCTCCACAAGCACTGGTCCACTCCCCACCTTTACCAGTCCACTCACCACCACACCTCGTCCATTCTCCACCGCCACCTATCGACTTCCACCCACCCTCTGTCCATTCTCCACTACCACCTGTTTACTCCCCACTACCACCAATCCAATCTCCACCACCTCTGACTGTGTCTTCTCCTTCTCCTCCTCCTAATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCACCAAATATCGTCTTCCAATACGTATCACCTTCTCCACCACAGTTTTCTGGCTATTGA

Coding sequence (CDS)

ATGACTCCTGAGGAGATCCATTTGATCAATCTTCATGGCCGAGATATAGTTCATTCCCCACCTCCTCCTGTTCACTCTCCACAAGCACTGGTCCACTCCCCACCTTTACCAGTCCACTCACCACCACACCTCGTCCATTCTCCACCGCCACCTATCGACTTCCACCCACCCTCTGTCCATTCTCCACTACCACCTGTTTACTCCCCACTACCACCAATCCAATCTCCACCACCTCTGACTGTGTCTTCTCCTTCTCCTCCTCCTAATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCACCAAATATCGTCTTCCAATACGTATCACCTTCTCCACCACAGTTTTCTGGCTATTGA

Protein sequence

MTPEEIHLINLHGRDIVHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQSPPPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY

Homology

[Close]

BLAST of CaUC06G110130 vs. NCBI nr
Match: XP_031744102.1 (LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 9.9e-29
Identity = 77/111 (69.37%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVY-------SP 76
           VHSPPPPVHSP   VHSPP PVHSPP  V+SPPPP+   PP V+SP PPVY       SP
Sbjct: 559 VHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVQSPPPPVYSPPPPVYSPPPPVQSP 618

Query: 77  LPPIQSPPPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
            PP+QSPPP T S P PPP+SSPPPSFED+ILPPNI FQY SP PP F GY
Sbjct: 619 PPPVQSPPPPTSSPPPPPPDSSPPPSFEDVILPPNIGFQYASPPPPLFPGY 669

[Close]

BLAST of CaUC06G110130 vs. NCBI nr
Match: KGN45679.2 (hypothetical protein Csa_004826 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 9.9e-29
Identity = 77/111 (69.37%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVY-------SP 76
           VHSPPPPVHSP   VHSPP PVHSPP  V+SPPPP+   PP V+SP PPVY       SP
Sbjct: 245 VHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVQSPPPPVYSPPPPVYSPPPPVQSP 304

Query: 77  LPPIQSPPPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
            PP+QSPPP T S P PPP+SSPPPSFED+ILPPNI FQY SP PP F GY
Sbjct: 305 PPPVQSPPPPTSSPPPPPPDSSPPPSFEDVILPPNIGFQYASPPPPLFPGY 355

[Close]

BLAST of CaUC06G110130 vs. NCBI nr
Match: TYK03031.1 (pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26
Identity = 76/120 (63.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQSP 76
           VHSPPPPVHSP   +HSPP PV+SPP  VHSPPPP+   PP +HSP PPVYSP PP+ SP
Sbjct: 565 VHSPPPPVHSPPPPIHSPPPPVYSPPPPVHSPPPPVYSPPPPIHSPPPPVYSPPPPVYSP 624

Query: 77  PPLTVSSP------------SPPP----NSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
           PP  V SP            SPPP    NSSPPPSFED+ILPPNI F+Y SP PP F GY
Sbjct: 625 PPPPVYSPPPPVQSPPPPTASPPPSPSINSSPPPSFEDVILPPNIGFEYASPPPPLFPGY 684

[Close]

BLAST of CaUC06G110130 vs. NCBI nr
Match: XP_008458675.1 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26
Identity = 76/120 (63.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQSP 76
           VHSPPPPVHSP   +HSPP PV+SPP  VHSPPPP+   PP +HSP PPVYSP PP+ SP
Sbjct: 558 VHSPPPPVHSPPPPIHSPPPPVYSPPPPVHSPPPPVYSPPPPIHSPPPPVYSPPPPVYSP 617

Query: 77  PPLTVSSP------------SPPP----NSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
           PP  V SP            SPPP    NSSPPPSFED+ILPPNI F+Y SP PP F GY
Sbjct: 618 PPPPVYSPPPPVQSPPPPTASPPPSPSINSSPPPSFEDVILPPNIGFEYASPPPPLFPGY 677

[Close]

BLAST of CaUC06G110130 vs. NCBI nr
Match: XP_011656354.2 (LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 4.6e-26
Identity = 75/106 (70.75%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYS-PLPPIQS 76
           VHSPPPPV+SP   VHSPP PV+SPP  VHSPPPP+   PP V SP PPVYS P PP+QS
Sbjct: 535 VHSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVRSPPPPVYSPPPPPVQS 594

Query: 77  PPPLTVSSPSPPP-NSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
           PPP T S P PP  +SSPPPSFED+ILPPNI FQY SP PP F GY
Sbjct: 595 PPPPTASPPPPPSHDSSPPPSFEDVILPPNIGFQYASPPPPLFPGY 640

[Close]

BLAST of CaUC06G110130 vs. ExPASy Swiss-Prot
Match: Q9XIL9 (Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PEX3 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-22
Identity = 70/136 (51.47%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHS--PPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQ 76
           VHSPPPPVHSP   VHSPP PV+S  PP  VHSPPPP+   PP VHSP PPVYSP PP+ 
Sbjct: 592 VHSPPPPVHSPPPPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVY 651

Query: 77  SPPPLTVSSPSPPPNSSP------------------------------PPSFEDIILPPN 121
           SPPP  V SP PPP  SP                              PP  E+ I+PP 
Sbjct: 652 SPPPPPVKSPPPPPVYSPPLLPPKMSSPPTQTPVNSPPPRTPSQTVEAPPPSEEFIIPPF 711

[Close]

BLAST of CaUC06G110130 vs. ExPASy Swiss-Prot
Match: O81765 (Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=PEX4 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.6e-19
Identity = 64/135 (47.41%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFH-----------PPSVHSPLPP 76
           VHSPPPPV SP   V+SPP PVHSPP  VHSPPPP   H           PP V+SP PP
Sbjct: 565 VHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYSPPPP 624

Query: 77  VYSP--------------------LPPIQSPPPLTVSSPSPPPNSSPPPSFEDIILPPNI 121
           V+SP                     PP+QSPPP  V     PP  +P PS ++ I+PP I
Sbjct: 625 VFSPPPSQSPPVVYSPPPRPPKINSPPVQSPPPAPVEKKETPPAHAPAPSDDEFIIPPFI 684

[Close]

BLAST of CaUC06G110130 vs. ExPASy Swiss-Prot
Match: Q9LJ64 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-17
Identity = 62/103 (60.19%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHS-PPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQS 76
           +HSPPPPV+SP   VHS PP PVHSPP  VHSPPPP+   PP VHSP PPV+SP PP+ S
Sbjct: 667 MHSPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHS 726

Query: 77  PPPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFS 119
           PPP  V SP PPP  SPPP       PP  V    SP PP  S
Sbjct: 727 PPP-PVQSPPPPPVFSPPPPAPIYSPPPPPVH---SPPPPVHS 765

[Close]

BLAST of CaUC06G110130 vs. ExPASy Swiss-Prot
Match: Q38913 (Extensin-1 OS=Arabidopsis thaliana OX=3702 GN=EXT1 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 51/106 (48.11%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 16  IVHSPPPPVH--SPQALVHSPPLPVH--SPPHLVHSPPPPIDFHPPSV--HSPLPPVYSP 75
           +  SPPPPVH   P  + HSPP PVH   PP + HSPPPP+ + PP V  HSP PPV+  
Sbjct: 238 VYKSPPPPVHYSPPPVVYHSPPPPVHYSPPPVVYHSPPPPVHYSPPPVVYHSPPPPVH-- 297

Query: 76  LPPIQSPPPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPP 116
                SPPP+   SP PP + SPPP       PP   ++Y SP PP
Sbjct: 298 ----YSPPPVVYHSPPPPVHYSPPPVVYHSPPPPKKHYEYKSPPPP 337

[Close]

BLAST of CaUC06G110130 vs. ExPASy Swiss-Prot
Match: Q9XIB6 (Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.8e-10
Identity = 55/106 (51.89%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLP--VHSPPHLVHSPPPPIDFHPPSVHS-PLPPVYSPLPPI 76
           ++SPPPPVHSP   V+S P P  V+SPP  V SPPPP    PP VHS P PPV+SP PP+
Sbjct: 549 IYSPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSP--PPPVHSPPPPPVFSPPPPV 608

Query: 77  QSPPPLT-VSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFS 119
            SPPP + V SP PP +S PPP +              SP PP FS
Sbjct: 609 FSPPPPSPVYSPPPPSHSPPPPVY--------------SPPPPTFS 638

[Close]

BLAST of CaUC06G110130 vs. ExPASy TrEMBL
Match: A0A5D3BTI5 (Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001260 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 7.6e-27
Identity = 76/120 (63.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQSP 76
           VHSPPPPVHSP   +HSPP PV+SPP  VHSPPPP+   PP +HSP PPVYSP PP+ SP
Sbjct: 565 VHSPPPPVHSPPPPIHSPPPPVYSPPPPVHSPPPPVYSPPPPIHSPPPPVYSPPPPVYSP 624

Query: 77  PPLTVSSP------------SPPP----NSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
           PP  V SP            SPPP    NSSPPPSFED+ILPPNI F+Y SP PP F GY
Sbjct: 625 PPPPVYSPPPPVQSPPPPTASPPPSPSINSSPPPSFEDVILPPNIGFEYASPPPPLFPGY 684

[Close]

BLAST of CaUC06G110130 vs. ExPASy TrEMBL
Match: A0A1S3C8I6 (pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103498003 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 7.6e-27
Identity = 76/120 (63.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQSP 76
           VHSPPPPVHSP   +HSPP PV+SPP  VHSPPPP+   PP +HSP PPVYSP PP+ SP
Sbjct: 558 VHSPPPPVHSPPPPIHSPPPPVYSPPPPVHSPPPPVYSPPPPIHSPPPPVYSPPPPVYSP 617

Query: 77  PPLTVSSP------------SPPP----NSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
           PP  V SP            SPPP    NSSPPPSFED+ILPPNI F+Y SP PP F GY
Sbjct: 618 PPPPVYSPPPPVQSPPPPTASPPPSPSINSSPPPSFEDVILPPNIGFEYASPPPPLFPGY 677

[Close]

BLAST of CaUC06G110130 vs. ExPASy TrEMBL
Match: A0A1S4E1Z5 (LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103497703 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.9e-26
Identity = 72/105 (68.57%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHS-PLPPVYSPLPPIQS 76
           VHSPPPPV+SP   V+SPP PV+SPP  V+SPPPP+   PP ++S P PPVYSP PP+QS
Sbjct: 565 VHSPPPPVYSPPPPVYSPPPPVYSPPPPVYSPPPPVLSPPPPIYSPPPPPVYSPPPPVQS 624

Query: 77  PPPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
           PPP T S P P  NSSPPPSFED+ILPPNI FQY SP PP F GY
Sbjct: 625 PPPPTASPPPPSSNSSPPPSFEDVILPPNIGFQYTSPPPPMFPGY 669

[Close]

BLAST of CaUC06G110130 vs. ExPASy TrEMBL
Match: A0A1U7ZDM8 (pollen-specific leucine-rich repeat extensin-like protein 3 OS=Nelumbo nucifera OX=4432 GN=LOC104593535 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.8e-26
Identity = 72/104 (69.23%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQSP 76
           VHSPPPPVHSP   VHSPP PVHSPP  VHSPPPP+   PP VHSP PPVYSP PPI SP
Sbjct: 502 VHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPIYSP 561

Query: 77  PPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
           PP   S   PPP  SPPP   D ILPP+I FQY SP PP F GY
Sbjct: 562 PPPPPSPSPPPPAHSPPPPSPDFILPPHIGFQYSSPPPPMFPGY 605

[Close]

BLAST of CaUC06G110130 vs. ExPASy TrEMBL
Match: A0A0A0KD15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G005160 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.5e-26
Identity = 73/117 (62.39%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQSP 76
           VHSPPPP++SP   V+SPP PVHSPP  VHSPPPP+   PP V SP PPVYSP PP+ SP
Sbjct: 411 VHSPPPPIYSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVYSPPPPVYSP 470

Query: 77  PPLTVSSP-------------SPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFSGY 121
           PP  V SP              PPP+SSPPPSFED+ILPPNI F+Y SP PP F GY
Sbjct: 471 PPPPVYSPPPPVQSPPPPIASPPPPDSSPPPSFEDVILPPNIGFEYASPPPPLFPGY 527

[Close]

BLAST of CaUC06G110130 vs. TAIR 10
Match: AT2G15880.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.9e-23
Identity = 70/136 (51.47%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHS--PPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQ 76
           VHSPPPPVHSP   VHSPP PV+S  PP  VHSPPPP+   PP VHSP PPVYSP PP+ 
Sbjct: 592 VHSPPPPVHSPPPPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVY 651

Query: 77  SPPPLTVSSPSPPPNSSP------------------------------PPSFEDIILPPN 121
           SPPP  V SP PPP  SP                              PP  E+ I+PP 
Sbjct: 652 SPPPPPVKSPPPPPVYSPPLLPPKMSSPPTQTPVNSPPPRTPSQTVEAPPPSEEFIIPPF 711

[Close]

BLAST of CaUC06G110130 vs. TAIR 10
Match: AT4G33970.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 95.1 bits (235), Expect = 4.0e-20
Identity = 64/135 (47.41%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLPVHSPPHLVHSPPPPIDFH-----------PPSVHSPLPP 76
           VHSPPPPV SP   V+SPP PVHSPP  VHSPPPP   H           PP V+SP PP
Sbjct: 565 VHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYSPPPP 624

Query: 77  VYSP--------------------LPPIQSPPPLTVSSPSPPPNSSPPPSFEDIILPPNI 121
           V+SP                     PP+QSPPP  V     PP  +P PS ++ I+PP I
Sbjct: 625 VFSPPPSQSPPVVYSPPPRPPKINSPPVQSPPPAPVEKKETPPAHAPAPSDDEFIIPPFI 684

[Close]

BLAST of CaUC06G110130 vs. TAIR 10
Match: AT3G19020.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 62/103 (60.19%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHS-PPLPVHSPPHLVHSPPPPIDFHPPSVHSPLPPVYSPLPPIQS 76
           +HSPPPPV+SP   VHS PP PVHSPP  VHSPPPP+   PP VHSP PPV+SP PP+ S
Sbjct: 667 MHSPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHS 726

Query: 77  PPPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFS 119
           PPP  V SP PPP  SPPP       PP  V    SP PP  S
Sbjct: 727 PPP-PVQSPPPPPVFSPPPPAPIYSPPPPPVH---SPPPPVHS 765

[Close]

BLAST of CaUC06G110130 vs. TAIR 10
Match: AT2G43150.1 (Proline-rich extensin-like family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 56/106 (52.83%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 18  HSPPPPVHSPQA--LVHSPPLPVHS--PPHLVHSPPPPIDFHPPS--VHSPLPPVYSPLP 77
           HSPPPPV SP      HSPP PV S  PP+  HSPPPP+   PP    HSP PPV SP P
Sbjct: 107 HSPPPPVKSPPPPYYYHSPPPPVKSPPPPYYYHSPPPPVKSPPPPYYYHSPPPPVKSPPP 166

Query: 78  P--IQSPPPLTVSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPP 116
           P    SPPP   S P P   SSPPP  +    PP  V+ Y SP PP
Sbjct: 167 PYYYHSPPPPVKSPPPPYLYSSPPPPVKS---PPPPVYIYASPPPP 209

[Close]

BLAST of CaUC06G110130 vs. TAIR 10
Match: AT1G49490.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-11
Identity = 55/106 (51.89%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 17  VHSPPPPVHSPQALVHSPPLP--VHSPPHLVHSPPPPIDFHPPSVHS-PLPPVYSPLPPI 76
           ++SPPPPVHSP   V+S P P  V+SPP  V SPPPP    PP VHS P PPV+SP PP+
Sbjct: 549 IYSPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSP--PPPVHSPPPPPVFSPPPPV 608

Query: 77  QSPPPLT-VSSPSPPPNSSPPPSFEDIILPPNIVFQYVSPSPPQFS 119
            SPPP + V SP PP +S PPP +              SP PP FS
Sbjct: 609 FSPPPPSPVYSPPPPSHSPPPPVY--------------SPPPPTFS 638

The following BLAST results are available for this feature:

BLAST of CaUC06G110130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744102.1	9.9e-29	69.37	LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3...	[more]
KGN45679.2	9.9e-29	69.37	hypothetical protein Csa_004826 [Cucumis sativus]	[more]
TYK03031.1	1.6e-26	63.33	pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis melo var. m...	[more]
XP_008458675.1	1.6e-26	63.33	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis ...	[more]
XP_011656354.2	4.6e-26	70.75	LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3...	[more]

BLAST of CaUC06G110130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIL9	5.5e-22	51.47	Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thali...	[more]
O81765	5.6e-19	47.41	Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thali...	[more]
Q9LJ64	2.4e-17	60.19	Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thali...	[more]
Q38913	1.1e-11	48.11	Extensin-1 OS=Arabidopsis thaliana OX=3702 GN=EXT1 PE=2 SV=2	[more]
Q9XIB6	4.8e-10	51.89	Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thali...	[more]

BLAST of CaUC06G110130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTI5	7.6e-27	63.33	Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var....	[more]
A0A1S3C8I6	7.6e-27	63.33	pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3...	[more]
A0A1S4E1Z5	2.9e-26	68.57	LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3...	[more]
A0A1U7ZDM8	3.8e-26	69.23	pollen-specific leucine-rich repeat extensin-like protein 3 OS=Nelumbo nucifera ...	[more]
A0A0A0KD15	6.5e-26	62.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G005160 PE=4 SV=1	[more]

BLAST of CaUC06G110130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15880.1	3.9e-23	51.47	Leucine-rich repeat (LRR) family protein	[more]
AT4G33970.1	4.0e-20	47.41	Leucine-rich repeat (LRR) family protein	[more]
AT3G19020.1	1.7e-18	60.19	Leucine-rich repeat (LRR) family protein	[more]
AT2G43150.1	1.5e-11	52.83	Proline-rich extensin-like family protein	[more]
AT1G49490.1	3.4e-11	51.89	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 108..120 score: 17.65 coord: 82..103 score: 30.91 coord: 19..31 score: 30.77 coord: 34..50 score: 41.18 coord: 62..74 score: 44.62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..99
None	No IPR available	PANTHER	PTHR32093	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	coord: 16..117
None	No IPR available	PANTHER	PTHR32093:SF146	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3	coord: 16..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G110130.1	CaUC06G110130.1	mRNA