CaUC06G109590 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G109590
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAgglutinin domain-containing protein
LocationCiama_Chr06: 3769459 .. 3769824 (-)
RNA-Seq ExpressionCaUC06G109590
SyntenyCaUC06G109590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACTCCCAAGATTTGCAGCTTTCAAATCAAACAACAATAGGAAGTATCTGAATTGCGTAAGAAGTGATGATGCGACAATACCCAACTTCGTGCAATATGGTTCAAATGAATTGGCAACAACATTCACCAAATTCTCAATTGAGGCTGCCAACATTGGGAAAAACCTATTCCACATTAGAAACATTTACAACCAAAAGTACTTGAGAGCTGAATCCTCAAGCAGTAGATGGATTTGTGCAACAGCTTTGGAGCCAAATGAAGATCAATCCAATTGGGATTGTACTCTGTTTCAAATTACTTATAATTCTTTTGGTCCAGGATATGAACTTGTTCATATCTATTATGGAAAGCCTGTGGAGTAG

mRNA sequence

ATGACACTCCCAAGATTTGCAGCTTTCAAATCAAACAACAATAGGAAGTATCTGAATTGCGTAAGAAGTGATGATGCGACAATACCCAACTTCGTGCAATATGGTTCAAATGAATTGGCAACAACATTCACCAAATTCTCAATTGAGGCTGCCAACATTGGGAAAAACCTATTCCACATTAGAAACATTTACAACCAAAAGTACTTGAGAGCTGAATCCTCAAGCAGTAGATGGATTTGTGCAACAGCTTTGGAGCCAAATGAAGATCAATCCAATTGGGATTGTACTCTGTTTCAAATTACTTATAATTCTTTTGGTCCAGGATATGAACTTGTTCATATCTATTATGGAAAGCCTGTGGAGTAG

Coding sequence (CDS)

ATGACACTCCCAAGATTTGCAGCTTTCAAATCAAACAACAATAGGAAGTATCTGAATTGCGTAAGAAGTGATGATGCGACAATACCCAACTTCGTGCAATATGGTTCAAATGAATTGGCAACAACATTCACCAAATTCTCAATTGAGGCTGCCAACATTGGGAAAAACCTATTCCACATTAGAAACATTTACAACCAAAAGTACTTGAGAGCTGAATCCTCAAGCAGTAGATGGATTTGTGCAACAGCTTTGGAGCCAAATGAAGATCAATCCAATTGGGATTGTACTCTGTTTCAAATTACTTATAATTCTTTTGGTCCAGGATATGAACTTGTTCATATCTATTATGGAAAGCCTGTGGAGTAG

Protein sequence

MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAANIGKNLFHIRNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYGKPVE
Homology
BLAST of CaUC06G109590 vs. NCBI nr
Match: XP_008458669.1 (PREDICTED: uncharacterized protein LOC103497997 [Cucumis melo] >TYK24762.1 uncharacterized protein E5676_scaffold266G003250 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 4.8e-39
Identity = 81/122 (66.39%), Postives = 99/122 (81.15%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAA-NIGKNLFH 60
           M +PRFA F+S+ N+KY+N V+SDD  IPNFVQY S+ LAT+ TKFS  A+ +  KNL+H
Sbjct: 1   MVVPRFAGFRSSKNQKYMNVVKSDDEKIPNFVQYSSDNLATSTTKFSFVASHDTAKNLYH 60

Query: 61  IRNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYGKP 120
           I  IYNQKYLRAESSSSRWICATALEPNEDQS+W CTLF+IT+ S    Y+L H+YYG+P
Sbjct: 61  IVCIYNQKYLRAESSSSRWICATALEPNEDQSDWGCTLFRITWGSTEQRYDLFHMYYGQP 120

Query: 121 VE 122
           V+
Sbjct: 121 VD 122

BLAST of CaUC06G109590 vs. NCBI nr
Match: XP_023521953.1 (uncharacterized protein LOC111785802 [Cucurbita pepo subsp. pepo] >XP_023544074.1 uncharacterized protein LOC111803768 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.5 bits (262), Expect = 3.2e-19
Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAANIGKNLFHI 60
           M LPR+ AFKS  +  YL  V+ +D  I  +++YG++ + T  TK+ +E A +GK   +I
Sbjct: 1   MVLPRYVAFKSKADDLYLKYVK-EDVQIHGYIKYGAHNVVTPHTKYEVEPAKVGKGYVNI 60

Query: 61  RNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYG 118
           R  YN KY    S ++R++ A A EPNEDQSNW CTLF+  ++     Y + H+Y+G
Sbjct: 61  RCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPIFDPDHQAYRIKHVYFG 116

BLAST of CaUC06G109590 vs. NCBI nr
Match: XP_023543559.1 (uncharacterized protein LOC111803409 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.5 bits (262), Expect = 3.2e-19
Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAANIGKNLFHI 60
           M LPR+ AFKS  +  YL  V+ +D  I  +++YG++ + T  TK+ +E A +GK   +I
Sbjct: 1   MVLPRYVAFKSKADDLYLKYVK-EDVQIHGYIKYGAHNVVTPHTKYEVEPAKVGKGYVNI 60

Query: 61  RNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYG 118
           R  YN KY    S ++R++ A A EPNEDQSNW CTLF+  ++     Y + H+Y+G
Sbjct: 61  RCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPIFDPDHQAYRIKHVYFG 116

BLAST of CaUC06G109590 vs. NCBI nr
Match: XP_022156033.1 (uncharacterized protein LOC111023006 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 9.3e-19
Identity = 48/117 (41.03%), Postives = 73/117 (62.39%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAANIGKNLFHI 60
           M LPR+ AFKS  +  YL  ++ +D  I  +V+Y ++ + T++TK+ +E A +GK   +I
Sbjct: 1   MVLPRYVAFKSKADDLYLKFIK-EDVQIHGYVKYDAHSVVTSYTKYEVEPAKVGKGYVNI 60

Query: 61  RNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYG 118
           R  YN KY    S  ++++ A A E NEDQSNW CTLF+ TY+ +   Y + H+Y G
Sbjct: 61  RCCYNNKYWVCPSMYTQYVVAAADERNEDQSNWACTLFEPTYDPYHKAYRIKHVYLG 116

BLAST of CaUC06G109590 vs. NCBI nr
Match: XP_023544067.1 (uncharacterized protein LOC111803764 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18
Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAANIGKNLFHI 60
           M LPR+ AFKS  +  YL  V+ +D  I  +++Y +  + T +TK+ +E+A +GK   +I
Sbjct: 1   MVLPRYVAFKSKADDLYLKYVK-EDVQIHGYIKYDAYNVMTPYTKYEVESAKVGKGYVNI 60

Query: 61  RNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYG 118
           R  YN KY    S ++R++ A A EPNEDQSNW CTLF+  ++S    Y + H+Y G
Sbjct: 61  RCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPIFDSDHQAYRIKHVYSG 116

BLAST of CaUC06G109590 vs. ExPASy TrEMBL
Match: A0A5D3DML5 (Agglutinin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003250 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39
Identity = 81/122 (66.39%), Postives = 99/122 (81.15%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAA-NIGKNLFH 60
           M +PRFA F+S+ N+KY+N V+SDD  IPNFVQY S+ LAT+ TKFS  A+ +  KNL+H
Sbjct: 1   MVVPRFAGFRSSKNQKYMNVVKSDDEKIPNFVQYSSDNLATSTTKFSFVASHDTAKNLYH 60

Query: 61  IRNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYGKP 120
           I  IYNQKYLRAESSSSRWICATALEPNEDQS+W CTLF+IT+ S    Y+L H+YYG+P
Sbjct: 61  IVCIYNQKYLRAESSSSRWICATALEPNEDQSDWGCTLFRITWGSTEQRYDLFHMYYGQP 120

Query: 121 VE 122
           V+
Sbjct: 121 VD 122

BLAST of CaUC06G109590 vs. ExPASy TrEMBL
Match: A0A1S3C8I1 (uncharacterized protein LOC103497997 OS=Cucumis melo OX=3656 GN=LOC103497997 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39
Identity = 81/122 (66.39%), Postives = 99/122 (81.15%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAA-NIGKNLFH 60
           M +PRFA F+S+ N+KY+N V+SDD  IPNFVQY S+ LAT+ TKFS  A+ +  KNL+H
Sbjct: 1   MVVPRFAGFRSSKNQKYMNVVKSDDEKIPNFVQYSSDNLATSTTKFSFVASHDTAKNLYH 60

Query: 61  IRNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYGKP 120
           I  IYNQKYLRAESSSSRWICATALEPNEDQS+W CTLF+IT+ S    Y+L H+YYG+P
Sbjct: 61  IVCIYNQKYLRAESSSSRWICATALEPNEDQSDWGCTLFRITWGSTEQRYDLFHMYYGQP 120

Query: 121 VE 122
           V+
Sbjct: 121 VD 122

BLAST of CaUC06G109590 vs. ExPASy TrEMBL
Match: A0A6J1DPH8 (uncharacterized protein LOC111023006 OS=Momordica charantia OX=3673 GN=LOC111023006 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.5e-19
Identity = 48/117 (41.03%), Postives = 73/117 (62.39%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAANIGKNLFHI 60
           M LPR+ AFKS  +  YL  ++ +D  I  +V+Y ++ + T++TK+ +E A +GK   +I
Sbjct: 1   MVLPRYVAFKSKADDLYLKFIK-EDVQIHGYVKYDAHSVVTSYTKYEVEPAKVGKGYVNI 60

Query: 61  RNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYG 118
           R  YN KY    S  ++++ A A E NEDQSNW CTLF+ TY+ +   Y + H+Y G
Sbjct: 61  RCCYNNKYWVCPSMYTQYVVAAADERNEDQSNWACTLFEPTYDPYHKAYRIKHVYLG 116

BLAST of CaUC06G109590 vs. ExPASy TrEMBL
Match: A0A6J1HV52 (uncharacterized protein LOC111467133 OS=Cucurbita maxima OX=3661 GN=LOC111467133 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-18
Identity = 48/117 (41.03%), Postives = 72/117 (61.54%), Query Frame = 0

Query: 1   MTLPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAANIGKNLFHI 60
           M LPR+ AFKS  +  YL  V+ +D  I  +++Y ++ + T  TK+ +E A +GK   +I
Sbjct: 1   MVLPRYVAFKSKADDLYLKYVK-EDVQIHGYIKYDAHNVVTPHTKYEVEPAKVGKGYVNI 60

Query: 61  RNIYNQKYLRAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYG 118
           R  YN KY    S ++R++ A A EPNEDQSNW CTLF+  ++     Y + H+Y+G
Sbjct: 61  RCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPIFDPDHQAYRIKHVYFG 116

BLAST of CaUC06G109590 vs. ExPASy TrEMBL
Match: A0A1S3CBZ5 (uncharacterized protein LOC103499082 OS=Cucumis melo OX=3656 GN=LOC103499082 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.7e-18
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 0

Query: 3   LPRFAAFKSNNNRKYLNCVRSDDATIPNFVQYGSNELATTFTKFSIEAANIGKNLFHIRN 62
           LP+FAA KS  N KYL  V    + +  F+QY  +E+ T FTKF  E A+   + +HI+ 
Sbjct: 4   LPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKC 63

Query: 63  IYNQKYL-RAESSSSRWICATALEPNEDQSNWDCTLFQITYNSFGPGYELVHIYYGKPV 121
            YN KYL  A SS   +I A A +  ED+S W CTLF+ TY+++   +   H+Y G  V
Sbjct: 64  CYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGSHV 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008458669.14.8e-3966.39PREDICTED: uncharacterized protein LOC103497997 [Cucumis melo] >TYK24762.1 uncha... [more]
XP_023521953.13.2e-1941.88uncharacterized protein LOC111785802 [Cucurbita pepo subsp. pepo] >XP_023544074.... [more]
XP_023543559.13.2e-1941.88uncharacterized protein LOC111803409 [Cucurbita pepo subsp. pepo][more]
XP_022156033.19.3e-1941.03uncharacterized protein LOC111023006 [Momordica charantia][more]
XP_023544067.11.2e-1841.88uncharacterized protein LOC111803764 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DML52.3e-3966.39Agglutinin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3C8I12.3e-3966.39uncharacterized protein LOC103497997 OS=Cucumis melo OX=3656 GN=LOC103497997 PE=... [more]
A0A6J1DPH84.5e-1941.03uncharacterized protein LOC111023006 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1HV521.0e-1841.03uncharacterized protein LOC111467133 OS=Cucurbita maxima OX=3661 GN=LOC111467133... [more]
A0A1S3CBZ51.7e-1842.02uncharacterized protein LOC103499082 OS=Cucumis melo OX=3656 GN=LOC103499082 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008998Agglutinin domainPFAMPF07468Agglutinincoord: 2..103
e-value: 1.7E-17
score: 64.0
NoneNo IPR availableGENE3D2.80.10.50coord: 1..121
e-value: 3.5E-33
score: 116.4
NoneNo IPR availablePANTHERPTHR39244NATTERIN-4coord: 1..106
IPR036242Agglutinin domain superfamilySUPERFAMILY50382Agglutinincoord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G109590.1CaUC06G109590.1mRNA