CaUC06G109220 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACAGTTTGTTAAAAGAGATGTAATGCGTGCAATAATAGCGATGGATGAACCTAGAGATGCTCTTTTGTTGAGGCTTTTTCAATGTCAACCTTTCCCCTGAAAATGCCAAGAAACTCAAAGCCTTTTCATACCTTTTTAGCCTCATCCATCTCTTTTGCTTTCTCCTCTTTTTACCCTAAATACTAAAATTTCTCAAAAACAGAGAGTGAAGTTATGGAGTCTAAAACACAACAAACAGACCAAAATTCTTCAGTTTCAAGTCTACCACTGTTCTCAATCCCACACCTACCATTAATGGACTCACCAGAACGCTCAGGGATGCTAACTCCACCAATCTACGCCGCCGTCTCGGTCCCGTTTCGGTGGGAGGAAGAGCCAGGCAAGCCTAGGTTCAGTTCTGCCACCGCCGTCTCCGCCGCCGCCTCTCCGAGCCTGGAGTTGCCTCCAAGGCTTTTGTTAATGGACAAAGTGCCAAGATCTGAGTGTTATTCTTCCTTTAGAATGATGGGATCTTCTTCTCTGAGTCCTGATGAGAAGAGTTCTTTGTTTATGAAGAAAAGAGGATGGTTTGGGTTTGGTTCATGGAGAAAGAGAGGTTTGAATTTGAGGGCAAAAAGAGAACAAATTGGAATTGGAGGGCTTGTGTTTCCATCCTTGGATTCGGAAGAGAGTTTTAGTTCAAAACTGGAAGCTTCAAGGTTTAGAAGGAATGGCAGCTTTTCAAGCTTAATGAGTACTCAAATTAGGCCTCATTTTTGGGTTAAGTATTTTCTTAATTATCTCTTCTAGGTTCTAGGTTGGGTTGTGTGGGTTTGTTTGTTGTTTTTTTTTAAGTAGTTCATATATTTTTTATTTTCGCTCGGGTTTATTTTCGTTCCTATCTTTTCAAAATGTCCATTTTTGTCCCTATAGTTTTAAAAGTTGACCATTTTGGGCTCTTCATTTTCATTTTTAAGTATTTCTTTAATTATCGCATGTGGGTTGTGCGTGTTTGTTTTTCTTTAAATACTACTTTAGTCCATATGTTTCTCAGTTTGGTTCATATAGTCTCATAATGTTCATTTTGATCCTTATATTTTGAACATCAGTTCATTTTTTGTCTCTATACTTTTAAAATGTCTATTTCTGGGCCGTAGTTTTAAAAAGTAACCATTTTGAATCCTTCATTCTAATTTTAGGAGTTCAAAATGGTAATTTCTAAAAATAGCACAAAGACTGAAATGAATTAAAGTTGGAAATCCAAGGATTATTATGAATATTTTGAAAGTACACCGACCAAAATGAACCAAAATGAAAAGTACATAGATGAAATGGATGGATATAGTAAATAGTAGTTAGTTGGTGGCTTATATATAAATATATATGTAAATTTTGGTGTTACAGGAAAGTGTATGTGAAGGTTTGAAGCATATGGTTCCATCATGGAGAAGCAAAAGGTTGAAGAGAGAGACTTAGTTTGATTTTTGTGTAATTTTCAACCCATTTGCACTAATGGAAAGTTCCAAAGCCTGTTAATATGTGTTGTTGATTTCTCTTTGTGTTTTCAAGCATTTTCTTGAGATTAGTTGAGAAAATTTGCCTTTATCCTTTGACTATGTTAATTAAAGACCATTTCCATAACATATAATGGTGCAACTAGCTAGCTCTACCCTTATCCAAACTCTTTTTACCTTATCATATGGGCTGCCCTTCCATTATTTCTATACGTTTTCTTTTCTCTTGCTCTCTCATTTTGGTTCATCTTTGACCAT GACAGTTTGTTAAAAGAGATGTAATGCGTGCAATAATAGCGATGGATGAACCTAGAGATGCTCTTTTGTTGAGGCTTTTTCAATGTCAACCTTTCCCCTGAAAATGCCAAGAAACTCAAAGCCTTTTCATACCTTTTTAGCCTCATCCATCTCTTTTGCTTTCTCCTCTTTTTACCCTAAATACTAAAATTTCTCAAAAACAGAGAGTGAAGTTATGGAGTCTAAAACACAACAAACAGACCAAAATTCTTCAGTTTCAAGTCTACCACTGTTCTCAATCCCACACCTACCATTAATGGACTCACCAGAACGCTCAGGGATGCTAACTCCACCAATCTACGCCGCCGTCTCGGTCCCGTTTCGGTGGGAGGAAGAGCCAGGCAAGCCTAGGTTCAGTTCTGCCACCGCCGTCTCCGCCGCCGCCTCTCCGAGCCTGGAGTTGCCTCCAAGGCTTTTGTTAATGGACAAAGTGCCAAGATCTGAGTGTTATTCTTCCTTTAGAATGATGGGATCTTCTTCTCTGAGTCCTGATGAGAAGAGTTCTTTGTTTATGAAGAAAAGAGGATGGTTTGGGTTTGGTTCATGGAGAAAGAGAGGTTTGAATTTGAGGGCAAAAAGAGAACAAATTGGAATTGGAGGGCTTGTGTTTCCATCCTTGGATTCGGAAGAGAGTTTTAGTTCAAAACTGGAAGCTTCAAGGTTTAGAAGGAATGGCAGCTTTTCAAGCTTAATGAGTACTCAAATTAGGCCTCATTTTTGGGAAAGTGTATGTGAAGGTTTGAAGCATATGGTTCCATCATGGAGAAGCAAAAGGTTGAAGAGAGAGACTTAGTTTGATTTTTGTGTAATTTTCAACCCATTTGCACTAATGGAAAGTTCCAAAGCCTGTTAATATGTGTTGTTGATTTCTCTTTGTGTTTTCAAGCATTTTCTTGAGATTAGTTGAGAAAATTTGCCTTTATCCTTTGACTATGTTAATTAAAGACCATTTCCATAACATATAATGGTGCAACTAGCTAGCTCTACCCTTATCCAAACTCTTTTTACCTTATCATATGGGCTGCCCTTCCATTATTTCTATACGTTTTCTTTTCTCTTGCTCTCTCATTTTGGTTCATCTTTGACCAT ATGGAGTCTAAAACACAACAAACAGACCAAAATTCTTCAGTTTCAAGTCTACCACTGTTCTCAATCCCACACCTACCATTAATGGACTCACCAGAACGCTCAGGGATGCTAACTCCACCAATCTACGCCGCCGTCTCGGTCCCGTTTCGGTGGGAGGAAGAGCCAGGCAAGCCTAGGTTCAGTTCTGCCACCGCCGTCTCCGCCGCCGCCTCTCCGAGCCTGGAGTTGCCTCCAAGGCTTTTGTTAATGGACAAAGTGCCAAGATCTGAGTGTTATTCTTCCTTTAGAATGATGGGATCTTCTTCTCTGAGTCCTGATGAGAAGAGTTCTTTGTTTATGAAGAAAAGAGGATGGTTTGGGTTTGGTTCATGGAGAAAGAGAGGTTTGAATTTGAGGGCAAAAAGAGAACAAATTGGAATTGGAGGGCTTGTGTTTCCATCCTTGGATTCGGAAGAGAGTTTTAGTTCAAAACTGGAAGCTTCAAGGTTTAGAAGGAATGGCAGCTTTTCAAGCTTAATGAGTACTCAAATTAGGCCTCATTTTTGGGAAAGTGTATGTGAAGGTTTGAAGCATATGGTTCCATCATGGAGAAGCAAAAGGTTGAAGAGAGAGACTTAG MESKTQQTDQNSSVSSLPLFSIPHLPLMDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATAVSAAASPSLELPPRLLLMDKVPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGFGSWRKRGLNLRAKREQIGIGGLVFPSLDSEESFSSKLEASRFRRNGSFSSLMSTQIRPHFWESVCEGLKHMVPSWRSKRLKRET Homology
BLAST of CaUC06G109220 vs. NCBI nr
Match: XP_038875382.1 (uncharacterized protein At4g00950-like [Benincasa hispida]) HSP 1 Score: 352.8 bits (904), Expect = 2.0e-93 Identity = 180/207 (86.96%), Postives = 188/207 (90.82%), Query Frame = 0
BLAST of CaUC06G109220 vs. NCBI nr
Match: XP_008459763.1 (PREDICTED: uncharacterized protein At4g00950 [Cucumis melo]) HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80 Identity = 162/206 (78.64%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of CaUC06G109220 vs. NCBI nr
Match: XP_004140632.2 (uncharacterized protein At4g00950 [Cucumis sativus] >KGN46492.1 hypothetical protein Csa_005492 [Cucumis sativus]) HSP 1 Score: 300.8 bits (769), Expect = 8.8e-78 Identity = 162/206 (78.64%), Postives = 171/206 (83.01%), Query Frame = 0
BLAST of CaUC06G109220 vs. NCBI nr
Match: XP_023513857.1 (uncharacterized protein LOC111778333 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.0 bits (606), Expect = 7.0e-59 Identity = 137/209 (65.55%), Postives = 154/209 (73.68%), Query Frame = 0
BLAST of CaUC06G109220 vs. NCBI nr
Match: XP_023005080.1 (uncharacterized protein LOC111498174 [Cucurbita maxima] >XP_023005081.1 uncharacterized protein LOC111498174 [Cucurbita maxima]) HSP 1 Score: 237.7 bits (605), Expect = 9.2e-59 Identity = 137/205 (66.83%), Postives = 155/205 (75.61%), Query Frame = 0
BLAST of CaUC06G109220 vs. ExPASy Swiss-Prot
Match: Q9M160 (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.4e-08 Identity = 66/218 (30.28%), Postives = 98/218 (44.95%), Query Frame = 0
BLAST of CaUC06G109220 vs. ExPASy TrEMBL
Match: A0A1S3CBE3 (uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103498800 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 5.4e-81 Identity = 162/206 (78.64%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of CaUC06G109220 vs. ExPASy TrEMBL
Match: A0A0A0KDR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103510 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 4.3e-78 Identity = 162/206 (78.64%), Postives = 171/206 (83.01%), Query Frame = 0
BLAST of CaUC06G109220 vs. ExPASy TrEMBL
Match: A0A6J1KTY4 (uncharacterized protein LOC111498174 OS=Cucurbita maxima OX=3661 GN=LOC111498174 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 4.4e-59 Identity = 137/205 (66.83%), Postives = 155/205 (75.61%), Query Frame = 0
BLAST of CaUC06G109220 vs. ExPASy TrEMBL
Match: A0A6J1H8B1 (uncharacterized protein At4g00950-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460982 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 2.2e-58 Identity = 137/209 (65.55%), Postives = 153/209 (73.21%), Query Frame = 0
BLAST of CaUC06G109220 vs. ExPASy TrEMBL
Match: A0A6J1H6U8 (uncharacterized protein At4g00950-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460982 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 6.7e-47 Identity = 120/187 (64.17%), Postives = 133/187 (71.12%), Query Frame = 0
BLAST of CaUC06G109220 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 60.1 bits (144), Expect = 2.4e-09 Identity = 66/218 (30.28%), Postives = 98/218 (44.95%), Query Frame = 0
BLAST of CaUC06G109220 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08 Identity = 47/176 (26.70%), Postives = 78/176 (44.32%), Query Frame = 0
BLAST of CaUC06G109220 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08 Identity = 65/234 (27.78%), Postives = 99/234 (42.31%), Query Frame = 0
BLAST of CaUC06G109220 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 7.9e-08 Identity = 63/215 (29.30%), Postives = 88/215 (40.93%), Query Frame = 0
BLAST of CaUC06G109220 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06 Identity = 59/214 (27.57%), Postives = 89/214 (41.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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