CaUC06G108600 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTACGGAATCTGCACAACCGACTTCGTGTAACTCGATTCAAGTTTAGATCCAGGCGCGGCGGAGCCGAATGCGACCTTACCGCCCTGGAGATCGGTAATGTTGACAAAACCTAGATTACCAGGCGCGTTGCCGGTGGTTTGGTAGAGCGTAGTGGAAAGAGTGGTTCCGTTGGAGATCTTGTGGAGTTTCGCCGGATCGTAGTAGTCCAAGACGATGTGGAGACTGAGGAGGTTTTTGATAACGGAGAGAGGATGTTTGGCAACGATGGGGGAGAGAGCGCCATTGGAGACGACAAGGACGGTGATAGTCTGACGGCTGTTGATCTCGTCAGCGAGTCTAGTCTGCTGCAGGTAGTTGCTGAAATCGCTGTACTGAGGGTAGTCTTTGAGCATGTCAGTAATATTGTGGGCGGAGACGATGGCAGCAGCGGCGGCGAAGGCGAGGAAGAGGAGAAGGGATTTGGAGGCCGCCATTGGAGAGGGGAGAGGAGAAACAGAGGAGGAGGATGA ATGTTGCGCGGCGGAGCCGAATGCGACCTTACCGCCCTGGAGATCGGTAATATTACCAGGCGCGTTGCCGGTGGTTTGGTAGAGCGTAGTGGAAAGAGTGGTTCCGTTGGAGATCTTGTGGAGTTTCGCCGGATCGTAGTAGTCCAAGACGATGTGGAGACTGAGGAGGTTTTTGATAACGGAGAGAGGATGTTTGGCAACGATGGGGGAGAGAGCGCCATTGGAGACGACAAGGACGGTGATAGTCTGACGGCTGTTGATCTCGTCAGCGAGTCTAGTCTGCTGCAGGTAGTTGCTGAAATCGCTGTACTGAGGGTAGTCTTTGAGCATGTCAGTAATATTGTGGGCGGAGACGATGGCAGCAGCGGCGGCGAAGGCGAGGAAGAGGAGAAGGGATTTGGAGGCCGCCATTGGAGAGGGGAGAGGAGAAACAGAGGAGGAGGATGA ATGTTGCGCGGCGGAGCCGAATGCGACCTTACCGCCCTGGAGATCGGTAATATTACCAGGCGCGTTGCCGGTGGTTTGGTAGAGCGTAGTGGAAAGAGTGGTTCCGTTGGAGATCTTGTGGAGTTTCGCCGGATCGTAGTAGTCCAAGACGATGTGGAGACTGAGGAGGTTTTTGATAACGGAGAGAGGATGTTTGGCAACGATGGGGGAGAGAGCGCCATTGGAGACGACAAGGACGGTGATAGTCTGACGGCTGTTGATCTCGTCAGCGAGTCTAGTCTGCTGCAGGTAGTTGCTGAAATCGCTGTACTGAGGGTAGTCTTTGAGCATGTCAGTAATATTGTGGGCGGAGACGATGGCAGCAGCGGCGGCGAAGGCGAGGAAGAGGAGAAGGGATTTGGAGGCCGCCATTGGAGAGGGGAGAGGAGAAACAGAGGAGGAGGATGA MLRGGAECDLTALEIGNITRRVAGGLVERSGKSGSVGDLVEFRRIVVVQDDVETEEVFDNGERMFGNDGGESAIGDDKDGDSLTAVDLVSESSLLQVVAEIAVLRVVFEHVSNIVGGDDGSSGGEGEEEEKGFGGRHWRGERRNRGGG Homology
BLAST of CaUC06G108600 vs. NCBI nr
Match: KCW72927.1 (hypothetical protein EUGRSUZ_E01366 [Eucalyptus grandis]) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-16 Identity = 62/143 (43.36%), Postives = 82/143 (57.34%), Query Frame = 0
BLAST of CaUC06G108600 vs. NCBI nr
Match: GER33580.1 (nuclear protein X1 [Striga asiatica]) HSP 1 Score: 82.8 bits (203), Expect = 2.7e-12 Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = 0
BLAST of CaUC06G108600 vs. NCBI nr
Match: KAF7844743.1 (hypothetical protein G2W53_001648 [Senna tora]) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-11 Identity = 56/130 (43.08%), Postives = 68/130 (52.31%), Query Frame = 0
BLAST of CaUC06G108600 vs. NCBI nr
Match: KAF8702535.1 (hypothetical protein HU200_032917 [Digitaria exilis]) HSP 1 Score: 75.9 bits (185), Expect = 3.3e-10 Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 0
BLAST of CaUC06G108600 vs. NCBI nr
Match: KGN44423.1 (hypothetical protein Csa_016298 [Cucumis sativus]) HSP 1 Score: 67.8 bits (164), Expect = 9.1e-08 Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 0
BLAST of CaUC06G108600 vs. ExPASy TrEMBL
Match: A0A059C3M7 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01366 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 5.2e-17 Identity = 62/143 (43.36%), Postives = 82/143 (57.34%), Query Frame = 0
BLAST of CaUC06G108600 vs. ExPASy TrEMBL
Match: A0A5A7PLF7 (Nuclear protein X1 OS=Striga asiatica OX=4170 GN=STAS_09719 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12 Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = 0
BLAST of CaUC06G108600 vs. ExPASy TrEMBL
Match: A0A0A0KZJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G577370 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12 Identity = 60/115 (52.17%), Postives = 72/115 (62.61%), Query Frame = 0
BLAST of CaUC06G108600 vs. ExPASy TrEMBL
Match: A0A0A0K4L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290465 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 4.4e-08 Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 0
BLAST of CaUC06G108600 vs. ExPASy TrEMBL
Match: A0A2P5A8V4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_356890 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 9.2e-06 Identity = 54/158 (34.18%), Postives = 75/158 (47.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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