CaUC06G108100 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAAGCCACAATTTGGCCGGTTATTGTGTCAAAAGTTGGCAACTCGACACCGCAATCTGGAGCGAAGATTTCAGTGAAGTTGTCGGAGGATGGATTGCAATTTACAGTGTTGTTACTAGTACAGTTTCCTTTGCAGAAGTTCACGAATTGCAACGCCATGCACCCAAGACCTGCACTGTCACTCAGGTGAGAGAGCTTCGCAGCAGTTCGGTTTCTGTTGATGATATCCACAATATCATTTGCTGGGTTTCCTGTAGAATGAAGAAGAAACTAAGTCATTCAGCCAAAAGAAAATGAAATGGAAAATGTTTCTATTTGGTGCTGCTAAGGATTATAACAACAGCAACAACATTATTCTCTATATTCTTTTATCTAAAGAATTATTTCAATACCCATTAGCAAAAATCAAGGAAAATGATACGTCACTCATGATACACAATTCAAAATTTATGTACGTCAGTATACAATCAAGCTATCTTCTTACTTCAAATTAAAATATCTCCCAACTTTCATCCTAGTTCATCAGCATCATACTATGCTCTACCCTCCTACTCATCGAGGCAACCATGTATAGGTTGTGCGCTTCAATGTCATCCATTTTTTGGGGCAGTTGATTTGGCAGAGGAGTCCAATATATATTTCATGGGTCTAGTTGGACTAGTGAATCAAAATTTAAAAGACTAGTGGAGAAAACAAACATCTCTCAACAACTTTCAAGTTGTAACAACTTCAATATATCTTGATCAGTTTGTGCAATTTCCTAACCAGGCTATAGAATGGGAAGCAACAGAAGGAAGAAATGGGAGACCACAAAGTTCAAACACAAAACAAGCTACAAAGATAACGGTCGGATACCACCTAACAAGGATACTTACTGAAACACAAAGAATACCAAGATAAAACTATAAGACAATATAATAGCCTTTCGAGAGTGCCATTTCTCTCCCTAAATTCTCGAATTCCTACCAGAATGATCCACCCTAAAGTGTCCAACTCCTCTTATTTATAACCGGATGCGACTAGTTAATTATCCTTAATGTACCTCACTAATATCCTACTAATTAATAATCATTATATATAGGGCTCTCACAATAACCTCTTCAACACCCCTGAAAACTAATATCAAAACACAACATCAATAAGAAGACAGAAGAAGCATAAATTCAATCAAATTAACACATCACAATCCACAATGCAGGTTCAACAATGGAAAAGGAAGAACTAAACAAGAGAGAAACTTACCATGGTACTTGGAGGAAACAAGAACAGCAAAGAGGAAAGAATAGACAATGAAGCACTGGAAGATACAGAGCTTCCTCATCATCATTACCACAAACAATGACTGACTGTAAAAAGAAATAGAGAAGATAAAAAGGCAAAAAAGAGAAGAAGAAAAAAGAGGGGTTTGCTTTACAGTGGAAGAAAGAAGAGTAATGGAAGTGGGAAAGGAAAAGAAACCCTAGTTGGGGAAAAGGGTGTAATGGGGAGTGGAAATTTTTCCGGGAAAAAGAAAGGGAGAGAGATTTATTGATCAAATTGTTGCAGAGATTGTGAGAAAGGACAAGAAAGTGGTGGCCCCAATTAGCCGTTTAGGTTCTTAAAAGAATGGGATTTCAAAACAAAAAAGAAAAAGGGATTTTTGGGGTAGGTCCATTCATGGGTCAGTTTCTGCTCCATTCATAATGGAGCCAGCCCTGTCCAGCTAACTCCTACATGGCCCAAACAAATTAACAATTTGTTATTCTAACTTTAAATTATGTTATTAATATTGATTGACAAAACAGAGTGTCATGGTTTGTATAAAGAATTAACTAAGGATGCGTCGTGTGATAGTTCAATTGATTAAAACATATACCATCTACTAAGAGGTTTGAATTTCAAACTCTTACCCATTGAATTCAATAGAGAAAAATAAATAAATAAGAAACTTATATCATTCTATTTTGTCTAAGTGTCTATTTTATGACATTGTTTGTCTACCATTTTTTTTTTTTTTTTTTATATTTTTTTAAATAAGCCTACGTTTTGGTCCATTGAACATTGCATGTTGTTGTTTAGACTAAAAGGATAAACAAATGCATCTTTTAAATTGTTTTCATCTTTTACTCCATTTTATTTCCTTAAAGATGTATAGGCCATGTTTGTACCCATGATTTTCAAATTGAAAAGAGTTCGAAGCTACAACTTTAAAGTGATTTGTTTTTTTATTTTCTTTTAAAATAAAAATAAAACTACCTAAATGAATAATAGAAATTACAACCTTCAAAATGTATTAACTAGCTTTTCTAAAATAATACATTACAAATGCAATGGCATGGATTCAAACCTAGGATTCTTCAGGAGAGATATAATTATATAAATGCTTAAACTCTTAAGCTAAACCTAAATTTTTTTAGTACAACAATCTTCAGGAGATTTTAAATCTTGACTTCAAAGTAAATTCTTTAATTTGAGCCTTTTATTATAATCGGATTGACTAATAATTAATGACGTAATTGATACCTCTATCCGCTGAGTTTAGGGTTTAGAAGTTGATAGAACATTCTAGACTTCATAATCTATTTTATCATTACACAAGCTCAACCCATCTCTTCCACTTGGACAGTTTAGCAATATTTCCATTTCCGTTGGCTCTGCAGCATACTCCAAAGCTCTTGCCTTGGCCGTTTAGCTCACTACCTTATCCATGGCGTCTATGTTCTTGACTGTGAAGCCCTTTGTAAACAAAATTGACGCACCCACTTTCTCCAATCAGAGAATACAGAGTAATTTCTTTTCTTCTTCCCTCAGCTCTACTCCAATCTCAGTTTTCTTCTTTCTTTCGTCGTTGATTTTGTTCGCATTGGTTCTGGACAGGCACTCGGAGAACTTCCCTTAAAGTCTGTGCAGTGTCGAAGAAATTGGAACCCACCAAGGTCTGTAACTGTTTCCCCCTTTTGTGGGGTTTCTATTGAGTTTTGCAGATTTTGGCTTCGTTTTTTGATTCATTGTCTGTTTTGAGTTGATGGGGTTAGAGATTTTGGGGTTGTGAGTTTATGATTAATGGTTTAGCTTTTGTTCTTTGTGAAATGCAGGTTGTTCCACAAGGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGGTGTGAATTTTTAACATCCATGAATTCCATGTTCTTCAATCATTTTGCTTTTGTATTCTTATGTGATATCTTGTTCAAGTTCTTATCAAGCTTATCTAAATTTGGAATTTTTCTTTAGTTTCCACCATATCCTTCGTAGTATCGTAACTTAAACAACCATGAGTAGTTGCATTGAGACTTGTGAGAAAAAAAGGTAAAGGGAATTTGGGGAATGGGTTCTCACGCTACAATTGTAGGTCACCTACTTAAGGTAATAAAGTTCTGCAAGTTTTTTTTTTTTGACGAAGCAATATCATAATGCTGGTCTCGACATTCATGAATATCAAAAGATGCACTTAAACTTTTGATCTTTAAATAACTTTGTAACATTGACTTGTAAGGCTCCGTTTGATAATCATCTGGGTTTTATTTTTAGTACTTGAAAATTGTGTTTGTTTTTCACAATTCCTTAGCAATGGGTTTCATCTCTCCTATTTATTTGAATTATGTTTCAAGGAAAAAAGGAAAAAAAAAAAAAAACACTTGAATTCGTATCAAAGTTCCAAAAAACAAAAATATGTTTTTATGAACTATGTTTTTATAGTTTTCAAAACCTGGTTTGGTTTTTAAAACATCCCTAAAATGTAGACAACAGACCAAGAAACTCATACGTCGAAGTAGTGTTTATAAGCTTTATTTTCGAAAACCAAAAACCAAATGATAATTAAATGAGGCCTAAGTCTTTTAACATGAACTTACATGGTTATTTGTATGGTTGTATAGTAGCTTAATTTGATTTTGTGTATCCTCTTCATTGGCATTTCCTATTGCGAAGGAACTACACATCTAGATAGTTCAATGTGTCAACAAAATTGTATTATATTCTATTAGAACTTGCTGATTGAGGGAGTTAACCATGAGCACATGTTGGGAACTCTACTTTTGTGATGGCAAATAAGAAAGTTCCTTCTCAAATTTCATTACTGACGTAGTAAAATAATTTATTCAACTCCATAAATGAATTTCTTGGCTGTGGGAGGGTATCCACTGCAGAAAGAATCTTCTCTGATACTCGTATAATTTTGTATTCATGCCTAAGTTAGTAGTTGTACCATGTTGAGGCTTTGAGAAATGGGGGTTACTACAGTTAAGGCACTGCTTTTTGGGGATAGAAATTTGGAAACAAGAGCACAATTTGGAGATACCTGCTAAATATGTTTTAGAGGCTTTAGAACTTCGTCGAGATACTTGTGTAGCATGCTTTTCGTGGATACCAATTAAGTACGACCTAAGAATATAATATGTTGGAAGGACAATAGTGCTAATCGTTCTGAACTCTTATGTTCTGAAATATGTTGCTTCATCAGCATGTGGCATGTAGTCTGGGATTGATTCTTCAATCATTTTATGTCACAGAAATCAGCAGGAGGAGTTCTACTTCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTGTTAGGAGAGGTAAGCAAAACTCCTTCCTTTTGCTTATCTTCTAGGACGGGGAATGGAACGAAGCTTCTCTCTTTCTTCATGTTTCTTTACTCCTGCTACTGCTGAGTTTGCATTTCTTTTCAGATCCTCTCTACAGGTGCTGATGCCGGTGAACTGGGGCAAGGAAAGAAGGTTAGGATTAACTTTTTGGTTAGCCTGTTGATTTTCTTATTGAATGCTGCAATATGTTTCCAATGAATCTGAACTTTTCTCGGAAAAAAAAAATGTTTCCTTGTGCCTTCTTTGAAGAAGAGAATTTTTCTTGTGTTACAGGTTCTTTTCTCAGACATTAGTGCTTATGAGGTAAGCCACCTTAGTTTGAAGATTACTTGTTCATTTCAGCAGTTATACTTCAGAATTTGCATAGTAGTTCATCATTTTCCATTTGAAACTGGTAGTTACCATAGCTTGTTCAGTTTTAATAGTACATGGACCAAATTGAAACTTCAAAGAAACAAGAAATTGACATAAACATTGGTCAGTGAAAAGAACTCATTATGCCTATTGGGTTTAAAATAGAGAAACACACTTATATTAGACTCAACCCAAATACACGCCACCAGACTGGATCAGCCGGACGCAGCTTAAAACAATCAACTCCCCTCCCCTTCAGGGTTAACTACCACTAAAGTTCCTAGAGGAGAGGACCTTGAGCAGTTTTCGGGTTTGGAGCAGAGATTCCCTTTAGATCTAAGGTTCAAACTCAAACGTCATACATCAGGAGAAACTATATACCATTGGACGACAATGTTTCAAAACCAGTGACCACATTGAACTAATTTTCTTACATTAGTTAAGGTGGACAGATTTTTAGAATATGGCTGCTTTTCTGTATACAAGGTGAAGTATAAACTATTGATTTTATTTTAACAATTGCACGTAATATGTCACAGGTGGATTTAGGCACAGATGCAAAACATGTCTTCTGCAAAGCAAGTGATTTACTGGCTGTAGTTGAGTAAGTTTCAGGAAGGGGAAAAAAAAAAAAAGCCACAACTCTGGTTGTATTAGGTTCCTTCTTTTTTGTAAGGCAGAGGGATTTTTCATTGTTGTAGCTACAAATGTAGTTGAATATGTTATATTGAAGTCTCTGACTCAGTTCTTTGGATTAATATTTCACTCTGTGCCATTTCTGCTACGCTCTCTTCTCCAACATTCTTGAGAACTCGGAAACTGATGGAAGTCATGAGAGAGAGACCATTGGAAGATGTTAGTATAGGTCTAATTGTTTCAATTTCCATTCTTGTCACTGTTGAATTAAAAGAAGAAAAATTAGTTGACCTAAAATCAATATTTAAACAACTGCTAATTTGGTTTACGTATATGATTCTCAGTTTGCAAAATGGATCCAAGATGGGGAGGGG ACAAGCCACAATTTGGCCGGTTATTGTGTCAAAAGTTGGCAACTCGACACCGCAATCTGGAGCGAAGATTTCAGTGAAGTTGTCGGAGGATGGATTGCAATTTACAGTGTTGTTACTAGTACAGTTTCCTTTGCAGAAGTTCACGAATTGCAACGCCATGCACCCAAGACCTGCACTGTCACTCAGCATACTCCAAAGCTCTTGCCTTGGCCGTTTAGCTCACTACCTTATCCATGGCGTCTATGTTCTTGACTGTGAAGCCCTTTGTAAACAAAATTGACGCACCCACTTTCTCCAATCAGAGAATACAGAGCACTCGGAGAACTTCCCTTAAAGTCTGTGCAGTGTCGAAGAAATTGGAACCCACCAAGGTTGTTCCACAAGGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTACTTCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTGTTAGGAGAGATCCTCTCTACAGGTGCTGATGCCGGTGAACTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATTAGTGCTTATGAGGTGGATTTAGGCACAGATGCAAAACATGTCTTCTGCAAAGCAAGTGATTTACTGGCTGTAGTTGAGTAAGTTTCAGGAAGGGGAAAAAAAAAAAAAGCCACAACTCTGGTTGTATTAGGTTCCTTCTTTTTTGTAAGGCAGAGGGATTTTTCATTGTTGTAGCTACAAATGTAGTTGAATATGTTATATTGAAGTCTCTGACTCAGTTCTTTGGATTAATATTTCACTCTGTGCCATTTCTGCTACGCTCTCTTCTCCAACATTCTTGAGAACTCGGAAACTGATGGAAGTCATGAGAGAGAGACCATTGGAAGATGTTAGTATAGGTCTAATTGTTTCAATTTCCATTCTTGTCACTGTTGAATTAAAAGAAGAAAAATTAGTTGACCTAAAATCAATATTTAAACAACTGCTAATTTGGTTTACGTATATGATTCTCAGTTTGCAAAATGGATCCAAGATGGGGAGGGG ATGGCGTCTATGTTCTTGACTGTGAAGCCCTTTGTAAACAAAATTGACGCACCCACTTTCTCCAATCAGAGAATACAGAGCACTCGGAGAACTTCCCTTAAAGTCTGTGCAGTGTCGAAGAAATTGGAACCCACCAAGGTTGTTCCACAAGGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTACTTCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTGTTAGGAGAGATCCTCTCTACAGGTGCTGATGCCGGTGAACTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATTAGTGCTTATGAGGTGGATTTAGGCACAGATGCAAAACATGTCTTCTGCAAAGCAAGTGATTTACTGGCTGTAGTTGAGTAA MASMFLTVKPFVNKIDAPTFSNQRIQSTRRTSLKVCAVSKKLEPTKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE Homology
BLAST of CaUC06G108100 vs. NCBI nr
Match: XP_038906447.1 (10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63 Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of CaUC06G108100 vs. NCBI nr
Match: XP_023006781.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima] >XP_023006782.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima] >XP_023549322.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63 Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of CaUC06G108100 vs. NCBI nr
Match: XP_022958987.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata] >XP_022958988.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 248.1 bits (632), Expect = 4.4e-62 Identity = 128/133 (96.24%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of CaUC06G108100 vs. NCBI nr
Match: KAG6574824.1 (10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013401.1 10 kDa chaperonin 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 246.9 bits (629), Expect = 9.8e-62 Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of CaUC06G108100 vs. NCBI nr
Match: XP_004145027.1 (10 kDa chaperonin 1, chloroplastic [Cucumis sativus] >XP_016902509.1 PREDICTED: 10 kDa chaperonin-like [Cucumis melo] >KAA0039955.1 chloroplast chaperonin [Cucumis melo var. makuwa] >TYK24548.1 chloroplast chaperonin [Cucumis melo var. makuwa]) HSP 1 Score: 244.2 bits (622), Expect = 6.4e-61 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy Swiss-Prot
Match: Q9M1C2 (10 kDa chaperonin 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-1 PE=2 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.2e-41 Identity = 91/138 (65.94%), Postives = 108/138 (78.26%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy Swiss-Prot
Match: O80504 (10 kDa chaperonin 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-2 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 4.2e-39 Identity = 85/139 (61.15%), Postives = 106/139 (76.26%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy Swiss-Prot
Match: A5GNB0 (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) OX=32051 GN=groS PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.7e-09 Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy Swiss-Prot
Match: Q0I7U2 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9311) OX=64471 GN=groS PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.7e-09 Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy Swiss-Prot
Match: Q7TV92 (10 kDa chaperonin OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=groS PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy TrEMBL
Match: A0A6J1KWR7 (10 kDa chaperonin 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499414 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63 Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy TrEMBL
Match: A0A6J1H3B8 (10 kDa chaperonin 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460114 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62 Identity = 128/133 (96.24%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy TrEMBL
Match: A0A5D3DLT2 (Chloroplast chaperonin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00930 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy TrEMBL
Match: A0A0A0KET7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G080390 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of CaUC06G108100 vs. ExPASy TrEMBL
Match: A0A1S4E2Q1 (10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC107991695 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of CaUC06G108100 vs. TAIR 10
Match: AT3G60210.1 (GroES-like family protein ) HSP 1 Score: 170.6 bits (431), Expect = 8.3e-43 Identity = 91/138 (65.94%), Postives = 108/138 (78.26%), Query Frame = 0
BLAST of CaUC06G108100 vs. TAIR 10
Match: AT2G44650.1 (chloroplast chaperonin 10 ) HSP 1 Score: 162.2 bits (409), Expect = 3.0e-40 Identity = 85/139 (61.15%), Postives = 106/139 (76.26%), Query Frame = 0
BLAST of CaUC06G108100 vs. TAIR 10
Match: AT5G20720.1 (chaperonin 20 ) HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07 Identity = 30/98 (30.61%), Postives = 56/98 (57.14%), Query Frame = 0
BLAST of CaUC06G108100 vs. TAIR 10
Match: AT5G20720.2 (chaperonin 20 ) HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07 Identity = 30/98 (30.61%), Postives = 56/98 (57.14%), Query Frame = 0
BLAST of CaUC06G108100 vs. TAIR 10
Match: AT5G20720.3 (chaperonin 20 ) HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07 Identity = 30/98 (30.61%), Postives = 56/98 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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