CaUC06G107990 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G107990
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionnatterin-2-like
LocationCiama_Chr06: 1690756 .. 1691717 (+)
RNA-Seq ExpressionCaUC06G107990
SyntenyCaUC06G107990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTACTTGCAAGGGATTTGGCAAGAGGGACACCCATATCTACAATTTTCTAGTAACGACATTGGGGACCATAGAGTTCCTCACCAGACTTCCATGACTACAAATGGTTACGTTGGAATCAAAGAGGCGGGATCCTAATTGGATTTGGGCTGACTCGGACGACACATCGTCAAAACCACGTGGCGCTTCGGTGCTTAGGGAACAACAATTTTGTTGAAAGGTTGAGTTGTGGATGGAAGACAAATTGTTTGAATGCTGCTACTTCCACTATTACATCTGCTGCTAAGTTGAAAATGGAAGAGCCTTTGGTTTCGAGGAGTATTTATAATGTGGAATATCGAGTATCGGATGCGAGGGTTTAGGACGAGAAAGTTATGATCATGGCTACTCAAAAGGCCACTAATAGAACCACCCAAAATGAGACATTGACTTTGAAGTTTAGTTGCACGGAGACTAAAACCAGCGTTTTGGAATCGTGTACAACTTGGAAGGTGGGTGCACAAACAGCTCTTAAAGCTACTTTTCCTTTTATTGCTGATGGAAAAATAACAATCTCAGGAGAGTTTTCAAGAACATATAAATGGGGGGAAATTATCATTATTGCCCTTGAATGCAACTTGTTACGGTGCCCCCAATGTGAATGGTGGAGGTTAGCTTGTTGTCTACACAGGGTTATTGTGACGTTCCCTTCTCTTATACTCAACCTGATGTGCTTTCAAATGGTAAACAAGTTTTCAAAGATTATGATGATGGTGTTTACATTGGCAGCAACTGCTACAACTTTAAGTACGACTCTACACAAATTCGACTTTGATTGCCATGAACAAACTAAGTATATATATATATTTGCTATCTTAATAATATGTAAGAATAAAATGTATCATTGCTACAGTTTAAGAAGCTCATATGAAACGCTCCAATCTGTCAAGTCCTTTGGAGAACCTTATGGAGTTGTAA

mRNA sequence

ATGGATAGTTCCTCACCAGACTTCCATGACTACAAATGGTTACGTTGGAATCAAAGAGGCGGGATCCTAATTGGATTTGGGCTGACTCGGACGACACATCGTCAAAACCACGTGGCGCTTCGGTGCTTAGGGAACAACAATTTTGTTGAAAGGTTGAGTTGTGGATGGAAGACAAATTGTTTGAATGCTGCTACTTCCACTATTACATCTGCTGCTAAGTTGAAAATGGAAGAGCCTTTGGTTTCGAGGAGTATTTATAATGTGGAATATCGAGTATCGGATGCGAGGGACGAGAAAGTTATGATCATGGCTACTCAAAAGGCCACTAATAGAACCACCCAAAATGAGACATTGACTTTGAAGTTTAGTTGCACGGAGACTAAAACCAGCGTTTTGGAATCGTGTACAACTTGGAAGGTGGGTGCACAAACAGCTCTTAAAGCTACTTTTCCTTTTATTGCTGATGGAAAAATAACAATCTCAGGAGAGTTTTCAAGAACATATAAATGGGGGGAAATTATCATTATTGCCCTTGAATGCAACTTGTTACGGTGCCCCCAATGTGAATGGTGGAGGTTAGCTTGTTGTCTACACAGGGTTATTGTGACGTTCCCTTCTCTTATACTCAACCTGATGTGCTTTCAAATGGTAAACAAGTTTTCAAAGATTATGATGATGGTGTTTACATTGGCAGCAACTGCTACAACTTTAAAAGCTCATATGAAACGCTCCAATCTGTCAAGTCCTTTGGAGAACCTTATGGAGTTGTAA

Coding sequence (CDS)

ATGGATAGTTCCTCACCAGACTTCCATGACTACAAATGGTTACGTTGGAATCAAAGAGGCGGGATCCTAATTGGATTTGGGCTGACTCGGACGACACATCGTCAAAACCACGTGGCGCTTCGGTGCTTAGGGAACAACAATTTTGTTGAAAGGTTGAGTTGTGGATGGAAGACAAATTGTTTGAATGCTGCTACTTCCACTATTACATCTGCTGCTAAGTTGAAAATGGAAGAGCCTTTGGTTTCGAGGAGTATTTATAATGTGGAATATCGAGTATCGGATGCGAGGGACGAGAAAGTTATGATCATGGCTACTCAAAAGGCCACTAATAGAACCACCCAAAATGAGACATTGACTTTGAAGTTTAGTTGCACGGAGACTAAAACCAGCGTTTTGGAATCGTGTACAACTTGGAAGGTGGGTGCACAAACAGCTCTTAAAGCTACTTTTCCTTTTATTGCTGATGGAAAAATAACAATCTCAGGAGAGTTTTCAAGAACATATAAATGGGGGGAAATTATCATTATTGCCCTTGAATGCAACTTGTTACGGTGCCCCCAATGTGAATGGTGGAGGTTAGCTTGTTGTCTACACAGGGTTATTGTGACGTTCCCTTCTCTTATACTCAACCTGATGTGCTTTCAAATGGTAAACAAGTTTTCAAAGATTATGATGATGGTGTTTACATTGGCAGCAACTGCTACAACTTTAAAAGCTCATATGAAACGCTCCAATCTGTCAAGTCCTTTGGAGAACCTTATGGAGTTGTAA

Protein sequence

MDSSSPDFHDYKWLRWNQRGGILIGFGLTRTTHRQNHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSDARDEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPFIADGKITISGEFSRTYKWGEIIIIALECNLLRCPQCEWWRLACCLHRVIVTFPSLILNLMCFQMVNKFSKIMMMVFTLAATATTLKAHMKRSNLSSPLENLMEL
Homology
BLAST of CaUC06G107990 vs. NCBI nr
Match: XP_038875129.1 (uncharacterized protein LOC120067663 [Benincasa hispida])

HSP 1 Score: 201.4 bits (511), Expect = 9.1e-48
Identity = 102/139 (73.38%), Postives = 118/139 (84.89%), Query Frame = 0

Query: 36  NHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSDA 95
           NHVALRCLGNN F+ R+S  WKTNCLNA T TIT+  KLKMEEP++SRSIYNV+YR+SDA
Sbjct: 258 NHVALRCLGNNKFLGRVSFEWKTNCLNACTPTITTETKLKMEEPVISRSIYNVKYRLSDA 317

Query: 96  R--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPFI 155
           R  DEKVMIMATQKA N+++Q+ET+TLKF C+ETK+S   S TTWK+ AQTALKA  PFI
Sbjct: 318 RIYDEKVMIMATQKAINKSSQSETITLKFMCSETKSSTWVSSTTWKLAAQTALKAGLPFI 377

Query: 156 ADGKITISGEFSRTYKWGE 173
           ADGKITIS EFS+TY WGE
Sbjct: 378 ADGKITISAEFSKTYNWGE 396

BLAST of CaUC06G107990 vs. NCBI nr
Match: KAG6575367.1 (hypothetical protein SDJN03_26006, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28
Identity = 70/140 (50.00%), Postives = 101/140 (72.14%), Query Frame = 0

Query: 35  QNHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSD 94
           +N VALR +GNNNF++RL+   KT+CLNAA +TI   A+L+ EE ++SR IYNV++R SD
Sbjct: 249 KNVVALRNMGNNNFIKRLTADGKTSCLNAAVNTIDGTARLQFEESVLSREIYNVKFRPSD 308

Query: 95  AR--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPF 154
           +R  D+  ++MAT+ ATN T ++ T+ LKF+ TETK+S+  S  + K+G +T ++   PF
Sbjct: 309 SRIYDQSTLVMATETATNTTKESHTMNLKFTYTETKSSMWNSSVSIKLGVKTTVQTGIPF 368

Query: 155 IADGKITISGEFSRTYKWGE 173
           I DGK+ IS  FS  Y+WGE
Sbjct: 369 IVDGKVEISATFSGQYQWGE 388

BLAST of CaUC06G107990 vs. NCBI nr
Match: XP_023520858.1 (uncharacterized protein LOC111784384 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28
Identity = 70/140 (50.00%), Postives = 101/140 (72.14%), Query Frame = 0

Query: 35  QNHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSD 94
           +N VALR +GNNNF++RL+   KT+CLNAA +TI   A+L+ EE ++SR IYNV++R SD
Sbjct: 249 KNVVALRNMGNNNFIKRLTADGKTSCLNAAVNTIDGTARLQFEESVLSREIYNVKFRPSD 308

Query: 95  AR--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPF 154
           +R  D+  ++MAT+ ATN T ++ T+ LKF+ TETK+S+  S  + K+G +T ++   PF
Sbjct: 309 SRIYDQSTLVMATETATNTTKESHTMNLKFTYTETKSSMWNSSVSIKLGVKTTVQTGIPF 368

Query: 155 IADGKITISGEFSRTYKWGE 173
           I DGK+ IS  FS  Y+WGE
Sbjct: 369 IVDGKVEISATFSGQYQWGE 388

BLAST of CaUC06G107990 vs. NCBI nr
Match: XP_022953934.1 (uncharacterized protein LOC111456342 [Cucurbita moschata])

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-28
Identity = 70/139 (50.36%), Postives = 100/139 (71.94%), Query Frame = 0

Query: 35  QNHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSD 94
           +N VALR +GNNNF++RL+   KT+CLNAA STI   A+L+ EE ++SR IYNV++R SD
Sbjct: 249 KNVVALRNMGNNNFIKRLTADGKTSCLNAAVSTIDGTARLQFEESVLSREIYNVKFRPSD 308

Query: 95  AR--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPF 154
           +R  D+  ++MAT+ ATN T ++ T+ LKF+ TETK+S+  S  + K+G +T ++   PF
Sbjct: 309 SRIYDQSTLVMATETATNTTKESHTMNLKFTYTETKSSMWNSSVSIKLGVKTTVQTGIPF 368

Query: 155 IADGKITISGEFSRTYKWG 172
           I DGK+ IS  FS  Y+WG
Sbjct: 369 IVDGKVKISATFSGQYQWG 387

BLAST of CaUC06G107990 vs. NCBI nr
Match: XP_022150379.1 (uncharacterized protein LOC111018555 [Momordica charantia])

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-28
Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 0

Query: 36  NHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSDA 95
           N +ALR LGNNNF++RL+   KT+CLNAA +TI   A+L+M EP++ R IYNV YR++D+
Sbjct: 251 NVIALRNLGNNNFIKRLTTEGKTSCLNAAINTIDETARLQMVEPVLRREIYNVNYRLADS 310

Query: 96  R--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPFI 155
           R  D+  ++MAT  ATNRT    T+ L  S TETK+S   S  + K+G +T L+   PFI
Sbjct: 311 RVYDQIPLVMATGDATNRTQVANTMNLNLSYTETKSSTWSSSVSTKLGVKTTLETGVPFI 370

Query: 156 ADGKITISGEFSRTYKWGE 173
           ADGK+ IS EFS +Y+WGE
Sbjct: 371 ADGKVEISAEFSGSYQWGE 389

BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: A0A6J1GRC7 (uncharacterized protein LOC111456342 OS=Cucurbita moschata OX=3662 GN=LOC111456342 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-28
Identity = 70/139 (50.36%), Postives = 100/139 (71.94%), Query Frame = 0

Query: 35  QNHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSD 94
           +N VALR +GNNNF++RL+   KT+CLNAA STI   A+L+ EE ++SR IYNV++R SD
Sbjct: 249 KNVVALRNMGNNNFIKRLTADGKTSCLNAAVSTIDGTARLQFEESVLSREIYNVKFRPSD 308

Query: 95  AR--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPF 154
           +R  D+  ++MAT+ ATN T ++ T+ LKF+ TETK+S+  S  + K+G +T ++   PF
Sbjct: 309 SRIYDQSTLVMATETATNTTKESHTMNLKFTYTETKSSMWNSSVSIKLGVKTTVQTGIPF 368

Query: 155 IADGKITISGEFSRTYKWG 172
           I DGK+ IS  FS  Y+WG
Sbjct: 369 IVDGKVKISATFSGQYQWG 387

BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: A0A6J1D9W8 (uncharacterized protein LOC111018555 OS=Momordica charantia OX=3673 GN=LOC111018555 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28
Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 0

Query: 36  NHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSDA 95
           N +ALR LGNNNF++RL+   KT+CLNAA +TI   A+L+M EP++ R IYNV YR++D+
Sbjct: 251 NVIALRNLGNNNFIKRLTTEGKTSCLNAAINTIDETARLQMVEPVLRREIYNVNYRLADS 310

Query: 96  R--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPFI 155
           R  D+  ++MAT  ATNRT    T+ L  S TETK+S   S  + K+G +T L+   PFI
Sbjct: 311 RVYDQIPLVMATGDATNRTQVANTMNLNLSYTETKSSTWSSSVSTKLGVKTTLETGVPFI 370

Query: 156 ADGKITISGEFSRTYKWGE 173
           ADGK+ IS EFS +Y+WGE
Sbjct: 371 ADGKVEISAEFSGSYQWGE 389

BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: A0A6J1GPH4 (uncharacterized protein LOC111456344 OS=Cucurbita moschata OX=3662 GN=LOC111456344 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27
Identity = 69/140 (49.29%), Postives = 99/140 (70.71%), Query Frame = 0

Query: 35  QNHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSD 94
           +N VALR +GNNNF++RL+   KT+CLNAA  TI   A+L+ EE ++SR IYNV++R SD
Sbjct: 249 KNVVALRNMGNNNFIKRLTTEGKTSCLNAAVRTIDVTARLQFEEAVLSREIYNVKFRPSD 308

Query: 95  AR--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPF 154
           +R  D+  ++MAT+ ATN T +  T+ LK + TETK+S+  S  + K+G +T ++   PF
Sbjct: 309 SRIYDQSTLVMATENATNTTKEPHTMNLKLTYTETKSSMWNSSVSMKLGVKTTIETGIPF 368

Query: 155 IADGKITISGEFSRTYKWGE 173
           I +GK+ IS EFS  Y+WGE
Sbjct: 369 IFEGKVEISAEFSGQYQWGE 388

BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: A0A6J1CVE2 (uncharacterized protein LOC111014736 OS=Momordica charantia OX=3673 GN=LOC111014736 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.2e-26
Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 0

Query: 36  NHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSDA 95
           N +ALR + N N+V+RL+   KT+CLNAA  +I    +L+M EP+ SR IYNV +R+SDA
Sbjct: 254 NVIALRSMSNKNYVKRLTADDKTSCLNAAEHSINFYTRLEMVEPVFSRKIYNVNFRLSDA 313

Query: 96  R--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPFI 155
           R  D+ VM+MAT  ATN+T  + T+ LK S T+TK+S   S  + K+G  T ++   PFI
Sbjct: 314 RIYDQTVMLMATATATNKTQASNTVNLKLSYTDTKSSTWTSSISMKLGIATTIETGVPFI 373

Query: 156 ADGKITISGEFSRTYKWGE 173
           ADGKI +S EFS  Y+WG+
Sbjct: 374 ADGKIEVSAEFSGGYEWGK 392

BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: F6HZZ6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25
Identity = 69/139 (49.64%), Postives = 98/139 (70.50%), Query Frame = 0

Query: 36  NHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSDA 95
           N VALR LGNNNF +RL+   KT+CLNAA STI+  A+L++ E ++SR+IYNV +R+ DA
Sbjct: 250 NVVALRNLGNNNFCKRLTTEGKTSCLNAAVSTISREARLEVAELVLSRNIYNVNFRLMDA 309

Query: 96  R--DEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPFI 155
           R  D+ V++M T +A NRT +  T  +K S TETK+S  +   + K+G +  +++  PFI
Sbjct: 310 RIYDQSVIVMTTAEAINRTHEPHTQQVKLSYTETKSSTWKGSVSLKLGVKITMESGVPFI 369

Query: 156 ADGKITISGEFSRTYKWGE 173
           A+GK+ IS EFS  Y+WGE
Sbjct: 370 ANGKLEISSEFSGAYEWGE 388

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875129.19.1e-4873.38uncharacterized protein LOC120067663 [Benincasa hispida][more]
KAG6575367.11.6e-2850.00hypothetical protein SDJN03_26006, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023520858.11.6e-2850.00uncharacterized protein LOC111784384 [Cucurbita pepo subsp. pepo][more]
XP_022953934.12.8e-2850.36uncharacterized protein LOC111456342 [Cucurbita moschata][more]
XP_022150379.13.6e-2852.52uncharacterized protein LOC111018555 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GRC71.3e-2850.36uncharacterized protein LOC111456342 OS=Cucurbita moschata OX=3662 GN=LOC1114563... [more]
A0A6J1D9W81.7e-2852.52uncharacterized protein LOC111018555 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1GPH41.5e-2749.29uncharacterized protein LOC111456344 OS=Cucurbita moschata OX=3662 GN=LOC1114563... [more]
A0A6J1CVE26.2e-2649.64uncharacterized protein LOC111014736 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
F6HZZ61.4e-2549.64Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.15.10Proaerolysin, chain A, domain 3coord: 83..173
e-value: 2.4E-19
score: 71.5
NoneNo IPR availableGENE3D2.80.10.50coord: 26..79
e-value: 8.6E-7
score: 30.9
NoneNo IPR availablePANTHERPTHR39244NATTERIN-4coord: 35..172
NoneNo IPR availableSUPERFAMILY56973Aerolisin/ETX pore-forming domaincoord: 32..172
IPR004991Aerolysin-like toxinPFAMPF03318ETX_MTX2coord: 94..164
e-value: 1.2E-5
score: 25.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G107990.1CaUC06G107990.1mRNA