CaUC06G107990 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTTACTTGCAAGGGATTTGGCAAGAGGGACACCCATATCTACAATTTTCTAGTAACGACATTGGGGACCATAGAGTTCCTCACCAGACTTCCATGACTACAAATGGTTACGTTGGAATCAAAGAGGCGGGATCCTAATTGGATTTGGGCTGACTCGGACGACACATCGTCAAAACCACGTGGCGCTTCGGTGCTTAGGGAACAACAATTTTGTTGAAAGGTTGAGTTGTGGATGGAAGACAAATTGTTTGAATGCTGCTACTTCCACTATTACATCTGCTGCTAAGTTGAAAATGGAAGAGCCTTTGGTTTCGAGGAGTATTTATAATGTGGAATATCGAGTATCGGATGCGAGGGTTTAGGACGAGAAAGTTATGATCATGGCTACTCAAAAGGCCACTAATAGAACCACCCAAAATGAGACATTGACTTTGAAGTTTAGTTGCACGGAGACTAAAACCAGCGTTTTGGAATCGTGTACAACTTGGAAGGTGGGTGCACAAACAGCTCTTAAAGCTACTTTTCCTTTTATTGCTGATGGAAAAATAACAATCTCAGGAGAGTTTTCAAGAACATATAAATGGGGGGAAATTATCATTATTGCCCTTGAATGCAACTTGTTACGGTGCCCCCAATGTGAATGGTGGAGGTTAGCTTGTTGTCTACACAGGGTTATTGTGACGTTCCCTTCTCTTATACTCAACCTGATGTGCTTTCAAATGGTAAACAAGTTTTCAAAGATTATGATGATGGTGTTTACATTGGCAGCAACTGCTACAACTTTAAGTACGACTCTACACAAATTCGACTTTGATTGCCATGAACAAACTAAGTATATATATATATTTGCTATCTTAATAATATGTAAGAATAAAATGTATCATTGCTACAGTTTAAGAAGCTCATATGAAACGCTCCAATCTGTCAAGTCCTTTGGAGAACCTTATGGAGTTGTAA ATGGATAGTTCCTCACCAGACTTCCATGACTACAAATGGTTACGTTGGAATCAAAGAGGCGGGATCCTAATTGGATTTGGGCTGACTCGGACGACACATCGTCAAAACCACGTGGCGCTTCGGTGCTTAGGGAACAACAATTTTGTTGAAAGGTTGAGTTGTGGATGGAAGACAAATTGTTTGAATGCTGCTACTTCCACTATTACATCTGCTGCTAAGTTGAAAATGGAAGAGCCTTTGGTTTCGAGGAGTATTTATAATGTGGAATATCGAGTATCGGATGCGAGGGACGAGAAAGTTATGATCATGGCTACTCAAAAGGCCACTAATAGAACCACCCAAAATGAGACATTGACTTTGAAGTTTAGTTGCACGGAGACTAAAACCAGCGTTTTGGAATCGTGTACAACTTGGAAGGTGGGTGCACAAACAGCTCTTAAAGCTACTTTTCCTTTTATTGCTGATGGAAAAATAACAATCTCAGGAGAGTTTTCAAGAACATATAAATGGGGGGAAATTATCATTATTGCCCTTGAATGCAACTTGTTACGGTGCCCCCAATGTGAATGGTGGAGGTTAGCTTGTTGTCTACACAGGGTTATTGTGACGTTCCCTTCTCTTATACTCAACCTGATGTGCTTTCAAATGGTAAACAAGTTTTCAAAGATTATGATGATGGTGTTTACATTGGCAGCAACTGCTACAACTTTAAAAGCTCATATGAAACGCTCCAATCTGTCAAGTCCTTTGGAGAACCTTATGGAGTTGTAA ATGGATAGTTCCTCACCAGACTTCCATGACTACAAATGGTTACGTTGGAATCAAAGAGGCGGGATCCTAATTGGATTTGGGCTGACTCGGACGACACATCGTCAAAACCACGTGGCGCTTCGGTGCTTAGGGAACAACAATTTTGTTGAAAGGTTGAGTTGTGGATGGAAGACAAATTGTTTGAATGCTGCTACTTCCACTATTACATCTGCTGCTAAGTTGAAAATGGAAGAGCCTTTGGTTTCGAGGAGTATTTATAATGTGGAATATCGAGTATCGGATGCGAGGGACGAGAAAGTTATGATCATGGCTACTCAAAAGGCCACTAATAGAACCACCCAAAATGAGACATTGACTTTGAAGTTTAGTTGCACGGAGACTAAAACCAGCGTTTTGGAATCGTGTACAACTTGGAAGGTGGGTGCACAAACAGCTCTTAAAGCTACTTTTCCTTTTATTGCTGATGGAAAAATAACAATCTCAGGAGAGTTTTCAAGAACATATAAATGGGGGGAAATTATCATTATTGCCCTTGAATGCAACTTGTTACGGTGCCCCCAATGTGAATGGTGGAGGTTAGCTTGTTGTCTACACAGGGTTATTGTGACGTTCCCTTCTCTTATACTCAACCTGATGTGCTTTCAAATGGTAAACAAGTTTTCAAAGATTATGATGATGGTGTTTACATTGGCAGCAACTGCTACAACTTTAAAAGCTCATATGAAACGCTCCAATCTGTCAAGTCCTTTGGAGAACCTTATGGAGTTGTAA MDSSSPDFHDYKWLRWNQRGGILIGFGLTRTTHRQNHVALRCLGNNNFVERLSCGWKTNCLNAATSTITSAAKLKMEEPLVSRSIYNVEYRVSDARDEKVMIMATQKATNRTTQNETLTLKFSCTETKTSVLESCTTWKVGAQTALKATFPFIADGKITISGEFSRTYKWGEIIIIALECNLLRCPQCEWWRLACCLHRVIVTFPSLILNLMCFQMVNKFSKIMMMVFTLAATATTLKAHMKRSNLSSPLENLMEL Homology
BLAST of CaUC06G107990 vs. NCBI nr
Match: XP_038875129.1 (uncharacterized protein LOC120067663 [Benincasa hispida]) HSP 1 Score: 201.4 bits (511), Expect = 9.1e-48 Identity = 102/139 (73.38%), Postives = 118/139 (84.89%), Query Frame = 0
BLAST of CaUC06G107990 vs. NCBI nr
Match: KAG6575367.1 (hypothetical protein SDJN03_26006, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28 Identity = 70/140 (50.00%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of CaUC06G107990 vs. NCBI nr
Match: XP_023520858.1 (uncharacterized protein LOC111784384 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28 Identity = 70/140 (50.00%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of CaUC06G107990 vs. NCBI nr
Match: XP_022953934.1 (uncharacterized protein LOC111456342 [Cucurbita moschata]) HSP 1 Score: 136.7 bits (343), Expect = 2.8e-28 Identity = 70/139 (50.36%), Postives = 100/139 (71.94%), Query Frame = 0
BLAST of CaUC06G107990 vs. NCBI nr
Match: XP_022150379.1 (uncharacterized protein LOC111018555 [Momordica charantia]) HSP 1 Score: 136.3 bits (342), Expect = 3.6e-28 Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: A0A6J1GRC7 (uncharacterized protein LOC111456342 OS=Cucurbita moschata OX=3662 GN=LOC111456342 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.3e-28 Identity = 70/139 (50.36%), Postives = 100/139 (71.94%), Query Frame = 0
BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: A0A6J1D9W8 (uncharacterized protein LOC111018555 OS=Momordica charantia OX=3673 GN=LOC111018555 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28 Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: A0A6J1GPH4 (uncharacterized protein LOC111456344 OS=Cucurbita moschata OX=3662 GN=LOC111456344 PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27 Identity = 69/140 (49.29%), Postives = 99/140 (70.71%), Query Frame = 0
BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: A0A6J1CVE2 (uncharacterized protein LOC111014736 OS=Momordica charantia OX=3673 GN=LOC111014736 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 6.2e-26 Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 0
BLAST of CaUC06G107990 vs. ExPASy TrEMBL
Match: F6HZZ6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25 Identity = 69/139 (49.64%), Postives = 98/139 (70.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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