CaUC06G107610 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G107610
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr06: 1264650 .. 1266097 (+)
RNA-Seq ExpressionCaUC06G107610
SyntenyCaUC06G107610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTATGAATCGACATTTCATTATATCATAAAAAATTAACGAAACATAAAAATAAATAACAAATGTCACTAATGTAAAACTAGTATAAATAATAAATATGTCAACTTGTTTAAAAGACGTAAAATATTTATTTACTAATTTACATTTTTTTTAATCTTTTGTTTTCATAATTTTTTTAGAAATATCCATTGACATTCCCATTTTCATAAAATTAAGACCTAGACGTTTCCTTTACATTTTGAAAGTATAGGGAAAAAAGAAAAATTGTGGTCCTCTGCTTTTGGATTTGGTTTCTATTTGATCCCTAAGTTTCGAAATGATATATTTTAGCACTTACATCTTGAGTTTAGTTTCAATATAAGTTATAGATTTCAAAATGTTACAATTTCACCTTGGGATTTGAGTTTTGTTTCAATTTAATCCTTACATTTCAAAATTTACACTTTTAACCTTTTTTTTTTCCCGCTAAGTACTCACTTTTCATATTTAGTAATAATGACTATTAGTTAATTTAAAATAATTATAATTAATTAAGTTTCACTATTTTTCATCACTACTAAAATTAAATTTAAAATTTTAGTTTCATAATTATTTTAAATTAATTAATAGACATTAACGTTAAATACCGAAAGTGAGTATTTAGTGAAAATTTGAGGGTAATGTTAAGAATCAAATCAAAATAAAACTCAAATAATTTTATAGATTAAATTGAAACCAAATGAACTAAATTAAAAACGTAGAAAAGAAAAACCATATTTTTGTTCCTATGGAAAATGGTAAGGACAAAATTGGTATTTTAACTTTTTTTTTTTAAAAAAAAAAAGGGAAAAAGAGTGAAAAAGTCAAAAGTCAAATATTCCAACGCGCTGCGTATAAAGCTCTGATGTGTACACGCGTCTTGTTGTTGGTCGAGTTGAGCGCTTCGGTCTTTGTTGTTCATTTCAATCTCATCCAATCCCTAAGTTTTCTGCATCAGTTTCTTCCATTCTTTGCCAATTATCACAAGTTTATACCAATTTTCTATCTTTGGAACTTGAAATTTAAACTTCCCCACTTCTCCATTTTCCCTTTGGTTCTTCCTGTTCAGTGAGAATCCAATCCCCCTATTTTTCCCTTCTTAAATCCTCTAGGTTTCTTCTTCCTCTCCTCCTCGGATCAATCGCCGTTATTTCTTGTTCTTCTCAACCAGACAGATCCCCGAAGCCTCTCCCAGGGTTCGTGTGGAGTTTAATTTCCGTTGGCTTCTGTAGTTCTTTGGTAATTTTATATTTCTTGATCCATTTTAGGCGGAAATGGGTCGCTAGCCTTTTCTATTTTCTTTTTCCTTATTATTATTATTATTATTGTTTTTTTTTCTCTTGGAGGTTACGTTACTTCATTTGATCATCTTGCTTCTGTGCTTTGTGATGGTCGTTGAATCTAGAACTATGGCTGTGTTGATGTGA

mRNA sequence

ATGAGGTTTCTTCTTCCTCTCCTCCTCGGATCAATCGCCGTTATTTCTTGTTCTTCTCAACCAGACAGATCCCCGAAGCCTCTCCCAGGGTTCGTGTGGAGTTTAATTTCCGTTGGCTTCTGTAGTTCTTTGGTTACGTTACTTCATTTGATCATCTTGCTTCTGTGCTTTGTGATGGTCGTTGAATCTAGAACTATGGCTGTGTTGATGTGA

Coding sequence (CDS)

ATGAGGTTTCTTCTTCCTCTCCTCCTCGGATCAATCGCCGTTATTTCTTGTTCTTCTCAACCAGACAGATCCCCGAAGCCTCTCCCAGGGTTCGTGTGGAGTTTAATTTCCGTTGGCTTCTGTAGTTCTTTGGTTACGTTACTTCATTTGATCATCTTGCTTCTGTGCTTTGTGATGGTCGTTGAATCTAGAACTATGGCTGTGTTGATGTGA

Protein sequence

MRFLLPLLLGSIAVISCSSQPDRSPKPLPGFVWSLISVGFCSSLVTLLHLIILLLCFVMVVESRTMAVLM
Homology
The following BLAST results are available for this feature:
BLAST of CaUC06G107610 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC06G107610 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC06G107610 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC06G107610 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G107610.1CaUC06G107610.1mRNA