CaUC06G107050 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATTAAGAGAGAAGGCTACATAGAGGAGAGAGAAAGACAAGAAAGAAGAGAGAGAGGCTAGGGTTTTTCGCTCAAGCCACTCTCTTCTTCGTACAAGAACAAGAACAAGAAGAATTTTCTTCGGAGGAAGAAAAATGGCCATTTTCCACAGTCCCCATCTCTTAATTTTCATATTTGGCATTCTTGGTAATCATTAATCATTCTCATTTTTTTTTTCTTTATCATAACGACTCTTAAACTCAGTTTTGTTCATATATATCTTTTACTAAACATCACTAGATCTTAATAATAATTTTATTAGTTAATATATATGTTTGAATCTTTTTACCTTCACTTGTTTCCTTGAATTAAAAAAAAAAAAAAGAATAAAGAATCATCTAAATAATAATCACCCTTTAATATCATCTACATAAGCTAATTAATTCATCCCATTCAAGAAATGTCCTCTTCCCATGACTTTCTTTGATGACCCTTTTGATAATAATTCTTAAGAATTAAATCTTACAAAAACAAACCCAAAAATCTATTTCTTTATTATTGTGTTATATAATAATAATTAAATATATATTTATCTATTTAACTAACGGTTGTAAAAATGAGAATAAAACTAAACATTTTTTTTTAAAAAAAAAAAGAAATTTTGCATTAATAATTAATTAATTAGTGGGGCTTGTCACATGCATTAATGGTTTCTCAACTAACTTTAAAACTTTCCCTTGCAGGTAACATCATTTCCTTCTTTGTCTACTTAGCTCCTTTGTAAGTGTCTCTCTCCTCTCATCCCAATCTCCACTTCTCAATTTCCATTCTCTTTTAACAATAATATAAATTTGCCAATTCTCACTAAGAGGAGCATTTTTAGAATTAAATGCAATAAAATTTATATCAATCCAACTACATCTCATTCTTAGTTTCTCCATCATACATCTAACCGTTCAAAACTTTTGTTCTTCATAAAAATAACGGATGTTAAATGGTTGAATTGAACTCTTTTTTCGATTCTCCTCTCAGGCCGACGTTTTATCGAATATGGCAAAAGAAGTCCACAGAGGGCTTCCACGCGCTGCCGTATCTAGTTGCGCTCTTCAGCTCCGCCCTTTGGCTTTGCTATGCCTTCCTCAAAACCAACACTTTTCTTCTCATCACCATCAACTCCTTTGGCTGCTTCGTCGAGTTTCTCTACTTCATCATTTTCATCATATTTGCTGTCAACCCGGTTAGGGTTAGTCCTAATATTCTTATTTATACATTATTACAAGATCTAAGTTCAAACATAAATCTCTTGTTTTAATACCATGTTAAATTATTATTAGTCGTAAAAATACATTCGATTAACTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAACAAAAAAAAAAAAAAAATCCCCTTTTTAATTTGTTTTGGTGTATTGAATATTGAACCCTTGTTGAATCTGGAAATTATTGTATTTACTCATCTACCTATTTGGAGTTGTTTTCAAATTACCCCATGATGGCAATAATTGCATTAAGTAGCTATTCCTTCCTATTACTTGATTAAGTAACTTTTTGTCTTATTAATCATAGGCTAAAATTCAAATTTACTCTTTTCAACTTTGAACCTTTTGTATCTCTTTCATCTCTTCTAACTTTTAAAATTAGAATTTAGCTTCCTTTTTATTTTTGAAAATTAAGCACAATGTCTCCACACTCCTTACAATCATTTGCATCTTTCTTAACTACAATGGTTGGATTATTAGTCACTTCTTACGATAATGTGCATATTTCAATTTGGTCCCTAGATTTCAAGATTTACATTTTAACCTCAATTTCTTACCAAATGTTCACTTTCAATCTTTGGCATTAATGTCTATTAATTAAATTTAAAATAATTATGAAATTAAATTTTAATAGTGATGAAAAATAGCAAAACTTAATTAATTATAATTATTTTCAATTAATAGATAAAAAAGTGAGTATTTAATGAAAAATCGAGTGTAAAAATTTTGAAACCTAAAACTAAACTTAAAATTTAAAATTTAGAGACCAAATAGAAACTAACGATGGGATTATCATCCATATATATATAAATAATTTTTGTTGCATGCAGAGACAAGTGATGACAACAAAGAGTGTTGAGTTTATGCCATTTACACTATCATTCTTCCTTACATTGAGTGCCATCATGTGGTTTGCTTATGGTCTTTTCTTGAACGACATATGCATTGCTGTAAGTAACTTTACTTTATTAAATCATTCGTGATTTTGGTTCATTTTAGTCTCTATATTTAAAAAAAGTTATTAAACAGACCAAAATGAACTAAAATCGAAAATACTTATGTTAAGGAATGGCTAATGAAATAATTATTATGGGGACAGATTCCAAACGTGGTGGGGTTCATATTGGGATTGGTTCAAATGGTGGTGTATGCAATTTATAGAAAGGGGAAATTAATGGAAGAGAAGCTGCCAGAACAAGTTGTGGTAAAAACCATAGCTGTTTCTGAGGTTTTTGGTTTGAAGCCCAACGGAAATGACGCACAAATTAAGGAAGTAATAATAGTAAAGAAGGAAACTCAAGAACAAGACAATCAGCTGTGACAAAAGCATTTATCAAATTTGTGTATACTTTCATTTCTATATACAATTGGGAGTCAACACAACAAAAAAAAAAAGATGGCCCTTTTCTCTCTCCTCCTCTCCATACTTTAATGCATCTTTCTCTCTCCTTTCCTCCAACTTTTACCCATTACTATTACTATTATCCATGTAATTTACATCCAATTATAAGTTTAATTTATGAATTTTGATTCTCTAAGT ATATTAAGAGAGAAGGCTACATAGAGGAGAGAGAAAGACAAGAAAGAAGAGAGAGAGGCTAGGGTTTTTCGCTCAAGCCACTCTCTTCTTCGTACAAGAACAAGAACAAGAAGAATTTTCTTCGGAGGAAGAAAAATGGCCATTTTCCACAGTCCCCATCTCTTAATTTTCATATTTGGCATTCTTGGTAACATCATTTCCTTCTTTGTCTACTTAGCTCCTTTGCCGACGTTTTATCGAATATGGCAAAAGAAGTCCACAGAGGGCTTCCACGCGCTGCCGTATCTAGTTGCGCTCTTCAGCTCCGCCCTTTGGCTTTGCTATGCCTTCCTCAAAACCAACACTTTTCTTCTCATCACCATCAACTCCTTTGGCTGCTTCGTCGAGTTTCTCTACTTCATCATTTTCATCATATTTGCTGTCAACCCGGTTAGGTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACAAGTGATGACAACAAAGAGTGTTGAGTTTATGCCATTTACACTATCATTCTTCCTTACATTGAGTGCCATCATGTGGTTTGCTTATGGTCTTTTCTTGAACGACATATGCATTGCTATTCCAAACGTGGTGGGGTTCATATTGGGATTGGTTCAAATGGTGGTGTATGCAATTTATAGAAAGGGGAAATTAATGGAAGAGAAGCTGCCAGAACAAGTTGTGGTAAAAACCATAGCTGTTTCTGAGGTTTTTGGTTTGAAGCCCAACGGAAATGACGCACAAATTAAGGAAGTAATAATAGTAAAGAAGGAAACTCAAGAACAAGACAATCAGCTGTGACAAAAGCATTTATCAAATTTGTGTATACTTTCATTTCTATATACAATTGGGAGTCAACACAACAAAAAAAAAAAGATGGCCCTTTTCTCTCTCCTCCTCTCCATACTTTAATGCATCTTTCTCTCTCCTTTCCTCCAACTTTTACCCATTACTATTACTATTATCCATGTAATTTACATCCAATTATAAGTTTAATTTATGAATTTTGATTCTCTAAGT ATGGCCATTTTCCACAGTCCCCATCTCTTAATTTTCATATTTGGCATTCTTGGTAACATCATTTCCTTCTTTGTCTACTTAGCTCCTTTGCCGACGTTTTATCGAATATGGCAAAAGAAGTCCACAGAGGGCTTCCACGCGCTGCCGTATCTAGTTGCGCTCTTCAGCTCCGCCCTTTGGCTTTGCTATGCCTTCCTCAAAACCAACACTTTTCTTCTCATCACCATCAACTCCTTTGGCTGCTTCGTCGAGTTTCTCTACTTCATCATTTTCATCATATTTGCTGTCAACCCGGTTAGGTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACAAGTGATGACAACAAAGAGTGTTGAGTTTATGCCATTTACACTATCATTCTTCCTTACATTGAGTGCCATCATGTGGTTTGCTTATGGTCTTTTCTTGAACGACATATGCATTGCTATTCCAAACGTGGTGGGGTTCATATTGGGATTGGTTCAAATGGTGGTGTATGCAATTTATAGAAAGGGGAAATTAATGGAAGAGAAGCTGCCAGAACAAGTTGTGGTAAAAACCATAGCTGTTTCTGAGGTTTTTGGTTTGAAGCCCAACGGAAATGACGCACAAATTAAGGAAGTAATAATAGTAAAGAAGGAAACTCAAGAACAAGACAATCAGCTGTGA MAIFHSPHLLIFIFGILGNIISFFVYLAPLPTFYRIWQKKSTEGFHALPYLVALFSSALWLCYAFLKTNTFLLITINSFGCFVEFLYFIIFIIFAVNPVRFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQVMTTKSVEFMPFTLSFFLTLSAIMWFAYGLFLNDICIAIPNVVGFILGLVQMVVYAIYRKGKLMEEKLPEQVVVKTIAVSEVFGLKPNGNDAQIKEVIIVKKETQEQDNQL Homology
BLAST of CaUC06G107050 vs. NCBI nr
Match: XP_038875798.1 (LOW QUALITY PROTEIN: bidirectional sugar transporter N3 [Benincasa hispida]) HSP 1 Score: 339.0 bits (868), Expect = 3.8e-89 Identity = 186/265 (70.19%), Postives = 201/265 (75.85%), Query Frame = 0
BLAST of CaUC06G107050 vs. NCBI nr
Match: XP_004140547.1 (bidirectional sugar transporter N3 [Cucumis sativus] >KGN46429.1 hypothetical protein Csa_005609 [Cucumis sativus]) HSP 1 Score: 326.2 bits (835), Expect = 2.6e-85 Identity = 184/269 (68.40%), Postives = 199/269 (73.98%), Query Frame = 0
BLAST of CaUC06G107050 vs. NCBI nr
Match: XP_008459891.1 (PREDICTED: bidirectional sugar transporter N3 [Cucumis melo]) HSP 1 Score: 320.5 bits (820), Expect = 1.4e-83 Identity = 182/269 (67.66%), Postives = 198/269 (73.61%), Query Frame = 0
BLAST of CaUC06G107050 vs. NCBI nr
Match: XP_023513923.1 (bidirectional sugar transporter N3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290.8 bits (743), Expect = 1.2e-74 Identity = 163/262 (62.21%), Postives = 189/262 (72.14%), Query Frame = 0
BLAST of CaUC06G107050 vs. NCBI nr
Match: KAG6592811.1 (Bidirectional sugar transporter SWEET15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 290.4 bits (742), Expect = 1.6e-74 Identity = 162/262 (61.83%), Postives = 189/262 (72.14%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy Swiss-Prot
Match: Q9FY94 (Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana OX=3702 GN=SWEET15 PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.4e-49 Identity = 118/246 (47.97%), Postives = 145/246 (58.94%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy Swiss-Prot
Match: P0DKJ5 (Bidirectional sugar transporter SWEET15 OS=Vitis vinifera OX=29760 GN=SWEET15 PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 7.1e-46 Identity = 118/266 (44.36%), Postives = 151/266 (56.77%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy Swiss-Prot
Match: P93332 (Bidirectional sugar transporter N3 OS=Medicago truncatula OX=3880 GN=N3 PE=2 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.3e-44 Identity = 116/241 (48.13%), Postives = 143/241 (59.34%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy Swiss-Prot
Match: Q9SMM5 (Bidirectional sugar transporter SWEET11 OS=Arabidopsis thaliana OX=3702 GN=SWEET11 PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.2e-39 Identity = 90/216 (41.67%), Postives = 129/216 (59.72%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy Swiss-Prot
Match: O82587 (Bidirectional sugar transporter SWEET12 OS=Arabidopsis thaliana OX=3702 GN=SWEET12 PE=1 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.8e-39 Identity = 97/229 (42.36%), Postives = 134/229 (58.52%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy TrEMBL
Match: A0A0A0KC70 (Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_6G092510 PE=3 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 1.2e-85 Identity = 184/269 (68.40%), Postives = 199/269 (73.98%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy TrEMBL
Match: A0A1S3CAR4 (Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103498874 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 6.8e-84 Identity = 182/269 (67.66%), Postives = 198/269 (73.61%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy TrEMBL
Match: A0A6J1H8U0 (Bidirectional sugar transporter SWEET OS=Cucurbita moschata OX=3662 GN=LOC111461102 PE=3 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 9.9e-75 Identity = 162/262 (61.83%), Postives = 189/262 (72.14%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy TrEMBL
Match: A0A6J1KRR8 (Bidirectional sugar transporter SWEET OS=Cucurbita maxima OX=3661 GN=LOC111497668 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.9e-74 Identity = 163/262 (62.21%), Postives = 188/262 (71.76%), Query Frame = 0
BLAST of CaUC06G107050 vs. ExPASy TrEMBL
Match: A0A5D3DMX9 (Bidirectional sugar transporter SWEET OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002090 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 8.1e-69 Identity = 159/265 (60.00%), Postives = 169/265 (63.77%), Query Frame = 0
BLAST of CaUC06G107050 vs. TAIR 10
Match: AT5G13170.1 (senescence-associated gene 29 ) HSP 1 Score: 197.2 bits (500), Expect = 1.7e-50 Identity = 118/246 (47.97%), Postives = 145/246 (58.94%), Query Frame = 0
BLAST of CaUC06G107050 vs. TAIR 10
Match: AT3G48740.1 (Nodulin MtN3 family protein ) HSP 1 Score: 164.1 bits (414), Expect = 1.6e-40 Identity = 90/216 (41.67%), Postives = 129/216 (59.72%), Query Frame = 0
BLAST of CaUC06G107050 vs. TAIR 10
Match: AT5G23660.1 (homolog of Medicago truncatula MTN3 ) HSP 1 Score: 163.3 bits (412), Expect = 2.7e-40 Identity = 97/229 (42.36%), Postives = 134/229 (58.52%), Query Frame = 0
BLAST of CaUC06G107050 vs. TAIR 10
Match: AT5G50790.1 (Nodulin MtN3 family protein ) HSP 1 Score: 148.7 bits (374), Expect = 6.8e-36 Identity = 88/212 (41.51%), Postives = 123/212 (58.02%), Query Frame = 0
BLAST of CaUC06G107050 vs. TAIR 10
Match: AT5G50800.1 (Nodulin MtN3 family protein ) HSP 1 Score: 146.4 bits (368), Expect = 3.4e-35 Identity = 90/210 (42.86%), Postives = 119/210 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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