CaUC06G107010 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTGTTTTGGGCTTTTGACAGCCAGGGTTGCTTCTCTGTCCAAAGTGCCTACCACCTTGCGTTATCGTTGAGGGAGGCGGCCCATCCATTGTCTTCAGGAAGGACGACTCTTGCTAAATCTTGGATGGATATTTAGAAAGCGGGTGTTATTCCAAAAATTAAATATGTGTGCTGGAGAAGTCTCAATAATATTATCCCTACCTCTTCGAATCTCTTATCAAAAGGAATCTTATCTAACCGGTTGTGTTGTTTTTTTAGGTCTTTCCATGAGACAACATGCCACATCATATGGGAGTGTAAGTTTACTAAGATGGTTTGGTTGTTATACCTCCCTTCTTATGTTGGTCTGGTTGGTGTTGGCAGGGGCAGGTGGTCCCCGTTGGATTATTGGGAGAACCTCAGGAGGGTGAGTTCCAGGCAGGAGCTTGATTGCAGGATGATCATTATGTGGAGTCTTTGGAACATGAGGAAGGGGGTTCGGTTCAGGAAGACCTCACCCTCCCTTGATCGTATTAGGGTGGGGATTGATTCATTCCCCCCCTTTGATGGCGTTGTTGCCAAAGGCCGTGTTAATGGTGTTATCTTTGATCCTCCGACCCACCCCTTCTGATTGGTCTCCCTCTTCTTTTGGGTGTTGGAAGCTGAATGTGGACGCTGCTTGGTCCGACATCAAAGGAAAGGGAGGCTATGGGTGGATCGTTGGAGACCACGAGGGTTGTGCTGTTTTTGGTGGTTGCAAGTTCATTTCTAAAGGCAGTTATGTGAGCCGGCTGGAAGCTGAGGCCATCCTTGCGGGGTTGAAATCGCTGGTTGAGGAGTGCTTAGGTCCTATTCCACCTTTGGAGGTGGAGTCTGATGCTTTGGAGGTTATCAGGCTGCTCAACAGGGAATTGGTTTCCATTGTTGAGATCGGTGTTATTGAGGACATTTTGTATTTTGTGAACTCTGTGAATATTAAATTTTTTTGTCATTGCCCCGTGAGAACAACAAAGCGGCTCATTCGATTGTCATCCTTATTAAGGTGCTCTTTGATATGGAAAGATGTTTTTTCAGATAGTTTGCTCCCGATTCTCGATGAAGAGTCTGTTAGAGAGTAGCTGGTGTTGGTTGATTTGGAACTTGTTTTAAAAAAAAAAAAAATTGTGAAAATTGAAAAGTGATTTCTATTTGTGAGCAGTTGATATTTACTATTTGACTGGCCGATCATAAAATGATTACGTTTTCCAACTACTGCTCATTCCATTATTGCAACTGTGTTCATCTGCTCAGCATCCCTTTCCTTCTTCAGTTTCATTGTAATGCAAACTCTTTCTTCTTTCTTTTTGTAATATTTAAATGCAATCTGACATTTTTTTTTCTTTGTCAAAAGTCTATAACAGGTAAAACGTTTAACTTACTGCGTTGAAGGGGTTTGAATTTATGTAGTATCTTTGTATTCTTACTCTTCTACTCAAGAAATGAGTTGTAGAAACATGAACTTTATAGTCTATCAATGCTTGATTTGTGATTTGAAGTATAGTGTATCATTTGGGATGTGATAACTTTGGGAAACTCGATATTGCTATAGTTACAAGTTATAATTTTGATCAAATTACATGTTTGTGTTTATTGATTTCTGAACTTTTCGAAGTATTTAGCATGTCTTTAAACTTTCAATTTTGTAACTAATAGGTTATTGAACTTTGAATTTTGA ATGAGGGGCAGGTGGTCCCCGTTGGATTATTGGGAGAACCTCAGGAGGGTGAGTTCCAGGCAGGAGCTTGATTGCAGGATGATCATTATGTGGAGTCTTTGGAACATGAGGAAGGGGGTTCGGTTCAGGAAGACCTCACCCTCCCTTGATCGTATTAGGGTGGGGATTGATTCATTCCCCCCCTTTGATGGCGTTGTTGCCAAAGGCCGTCTGAATGTGGACGCTGCTTGGTCCGACATCAAAGGAAAGGGAGGCTATGGGTGGATCGTTGGAGACCACGAGGGTTGTGCTGTTTTTGGTGGTTGCAAGTTCATTTCTAAAGGCAGTTATGTGAGCCGGCTGGAAGCTGAGGCCATCCTTGCGGGGTTGAAATCGCTGGTTGAGGAGTGCTTAGGTCCTATTCCACCTTTGGAGGTGGAGTCTGATGCTTTGGAGGTTATCAGGCTGCTCAACAGGGAATTGGTTTCCATTGTTGAGATCGGTGTTATTGAGGACATTTTGTTATTGAACTTTGAATTTTGA ATGAGGGGCAGGTGGTCCCCGTTGGATTATTGGGAGAACCTCAGGAGGGTGAGTTCCAGGCAGGAGCTTGATTGCAGGATGATCATTATGTGGAGTCTTTGGAACATGAGGAAGGGGGTTCGGTTCAGGAAGACCTCACCCTCCCTTGATCGTATTAGGGTGGGGATTGATTCATTCCCCCCCTTTGATGGCGTTGTTGCCAAAGGCCGTCTGAATGTGGACGCTGCTTGGTCCGACATCAAAGGAAAGGGAGGCTATGGGTGGATCGTTGGAGACCACGAGGGTTGTGCTGTTTTTGGTGGTTGCAAGTTCATTTCTAAAGGCAGTTATGTGAGCCGGCTGGAAGCTGAGGCCATCCTTGCGGGGTTGAAATCGCTGGTTGAGGAGTGCTTAGGTCCTATTCCACCTTTGGAGGTGGAGTCTGATGCTTTGGAGGTTATCAGGCTGCTCAACAGGGAATTGGTTTCCATTGTTGAGATCGGTGTTATTGAGGACATTTTGTTATTGAACTTTGAATTTTGA MRGRWSPLDYWENLRRVSSRQELDCRMIIMWSLWNMRKGVRFRKTSPSLDRIRVGIDSFPPFDGVVAKGRLNVDAAWSDIKGKGGYGWIVGDHEGCAVFGGCKFISKGSYVSRLEAEAILAGLKSLVEECLGPIPPLEVESDALEVIRLLNRELVSIVEIGVIEDILLLNFEF Homology
BLAST of CaUC06G107010 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 80.1 bits (196), Expect = 2.1e-11 Identity = 57/176 (32.39%), Postives = 84/176 (47.73%), Query Frame = 0
BLAST of CaUC06G107010 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]) HSP 1 Score: 72.0 bits (175), Expect = 5.6e-09 Identity = 54/183 (29.51%), Postives = 78/183 (42.62%), Query Frame = 0
BLAST of CaUC06G107010 vs. NCBI nr
Match: XP_022154991.1 (uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]) HSP 1 Score: 72.0 bits (175), Expect = 5.6e-09 Identity = 54/183 (29.51%), Postives = 78/183 (42.62%), Query Frame = 0
BLAST of CaUC06G107010 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia]) HSP 1 Score: 69.3 bits (168), Expect = 3.6e-08 Identity = 57/193 (29.53%), Postives = 84/193 (43.52%), Query Frame = 0
BLAST of CaUC06G107010 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia]) HSP 1 Score: 65.9 bits (159), Expect = 4.0e-07 Identity = 48/169 (28.40%), Postives = 69/169 (40.83%), Query Frame = 0
BLAST of CaUC06G107010 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.0e-11 Identity = 57/176 (32.39%), Postives = 84/176 (47.73%), Query Frame = 0
BLAST of CaUC06G107010 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.8e-08 Identity = 57/193 (29.53%), Postives = 84/193 (43.52%), Query Frame = 0
BLAST of CaUC06G107010 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.0e-07 Identity = 48/169 (28.40%), Postives = 69/169 (40.83%), Query Frame = 0
BLAST of CaUC06G107010 vs. ExPASy TrEMBL
Match: A0A6J1D4B6 (uncharacterized protein LOC111017181 OS=Momordica charantia OX=3673 GN=LOC111017181 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.1e-05 Identity = 48/187 (25.67%), Postives = 80/187 (42.78%), Query Frame = 0
BLAST of CaUC06G107010 vs. ExPASy TrEMBL
Match: A0A0P0VD96 (Os01g0967700 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0967700 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 3.4e-04 Identity = 32/84 (38.10%), Postives = 45/84 (53.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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