CaUC06G106960 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G106960
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	Ciama_Chr06: 446049 .. 452268 (-)
RNA-Seq Expression	CaUC06G106960
Synteny	CaUC06G106960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCCTCTCCTTTTCACTTTCCAGCACAAATCTCCATCCATGGCGGCTTCTTTTGCTACTACGCCTCTGGTAAACTTTCCTGTCCTTTAATCTCCATTTTCCACTTCCGTTTCGTTTCAATTGATTTTCCTTTTCCCACTCCAAGGTTGGCTTCGTTTCTGCTTACAATACCGTCTCGCAAACCAAAGCTTCAGGCCCGTCTAATTCGGTTAAGCTTCATACGCTTCAATTGCCTTCGAATCTTTCGTCCTCGTCCAGTTTTCTGCCCGCTTCGTTGCGTTTTCCTTCTCTGACAACTTCTTTCAATCCGTTGTCTTCGAGGAATGCTGTTCGTAGCTCCGTCCGAGCTAGTGCTGAGGTTAGCAACATGCTGTTGTTTTTCTGTACAATTAGTTGCTATGCATTTGAAATGAAAGCAAGGCTTCACTCAAAGATTGAAAATGGCAACATTGATCTTCTTTTCTTTGATTTAGGTACCTCCTCTACAAGCCAAAGTAACAAACAAGGTATATTTCGATGTGAGCATTGGTAATCCAGTAGGGAAACTTGCTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTCCCCAAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGTAATATACATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATGAGACATTTAGTTGTTTACCTCTTACCCATAGAAATTCAAGTCAGCTTCTGGATGTAATGTAACCAACTTTACTAACTTTATTAGGAGAGAAGGGCTTTGGATTCAAAGGTTCTGCCTTTCATCGTGTAATCAGAGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGTGAGTGCTCTCTAATGCATGTGTATCATTTATTATTTTATTCACCAGGTCAAGAATTCCCACTTTCTTTTGACACTGTACCAATAAAATTCATATCTTGTTATAGGTTCTTTTTCAAAAAATGTTCTCATTAGTTGCTCACTGAAATATCCGAACTGTTTTGTTGTCGATTGGTCATTTGGTGATTTCCTATCTAGGAGGTAGGAATAATAGTGCTATGGGGTTGGATATGCACATAGAATCACGATTGCCGTAAATGGCATATATTTCTCATCAGTTGGTAAGTTTGTGAACTATTATTGGGTTCGTATTGGGAGCTTGTGTATGCTATTCGACACAGTGAAAGAATTTAGGCTAAAATTTTAGAACGAAGAGAAAATTTGAAAGCAGCTTTTCCTATTGTGTGCTATGGCACTTTGCTTGATTGGAGCTTGACACTTACAAAGGGTGGAAAACACCTCTATTTATAGGTGTTTAGGAAGGACTCTGGAGAGTTCTAAAATTAATGTCCTAGGTACTAGAAATTGAGGAAAATACATAATCCTTTCACGTTCCAAAAGATTCGAAGAATAAGTCAAAAGGCTCTTTGGAAATTGGAAATTATATTTAGCATAAGCTAGCTTAACATGGATTTGCTAAGATAATTTACATCCCCACCTACCTGAATAGAAAAAGAAGAGGTTGTGTTATTTGTCGCCAGACTATTATGAAATCTCTCTCTTTCTCTCTCTCTCTCTCTCTGTTTTTTTTTTGTTCACAATGCAGTGTTTCAAATAAATATTCCTGGATAACACTATGGTTTTTGTAGTAATGATATACTCCTTTTGTTTTGTTTAAAAATTTTTCTATGAAGTCTAAACTTTGAAGGGTTCAATCCATGGTGGTCACTTACCTAGGAATTAATTTCCTATGAATTTCATTGACACCCAAATGTTGTAGGGTCAGGCGGGTTGTCCCGTGAGATTAGTCGAGGTGCACGTATGCTGGCCCGGACATCATGGATATCAAAAAAAATAAAAACTTTGAAGGATACATTTTGTTAATAGACACTGTTTTTAGGTTGAGTGCCGGTTGGTCTGATTGAAAGATTTTGTGAATATGGCGAGTTTTTCATGCTGGTAAAAGAAAAGGAAAAATATTGCCTTTGAACATAATTATAATATGACAATGGGAAGGAAGTCAGAGTATATGCCACTTTTGACATTTATAACAAAGAAGAAAGTACAGGGGAAGCACACAGGTTCAATAATATCTTGTCATGCATGGTATCAAACGCTTGGATTGAAGAGCAGTAGATATTGCGACAGACAAATTTCCTTCGATGATTGATTTGTTATGGGTATAAGATAATTCTTTGGATAAAAGGGAGAGAGATGATGAATTAAAATACTTACACAGTTAGTAAACGCTAAGAATTAAATAGATATTCTCTAAATGGTTTTACAGTCCATGGACCGTGTATTCTTTCATTTTTATCTCAATGAAATTTGTCATTATTTTTTTTTAAAGAAATAGAGGTTTACTGTCAATGTTGCATATATTATCTAACACCAGGATCTTAATATATTCTTTCCATGCTTTCCATTATATCAAGGCGTTTATTTATAAATTGGATGTATTCTTATAAAAAAATATTAGATGAATTCTTCTGAATGAATACTAACCAGATCTTACATTTTTCAGGGAACTGGGGGTAAAAGCATATATGGTCGTACATTTAAAGATGAAAACTTCAAATGTAAGTTAAATCCTATACCTCAGGCCTCAGCTGCTGCTTTCTGTCATCTGTTTCTGTGAACAACTACCAAAATTGCTATTTAACCAACAAAAGCCTAATTTTACTTTATACCGCATGTCTATTAAGAAATGATTTGACTATTTGCATTACTGGCATGAAATTTCCATGTTGTTAGATGTTTTTTCTTTATATAATTGTATTATATATTGCCCATGTCTTATTGAACATTTAGTTTATATGATTGTTGTCGTCTTTCTTTCTTTCTTTTGTTTTTGTTTTTGGATTTTTAACAACCTCCTTGAATAATGAAAGAAAACAAAAGGGAGGAGTGAGGAGTGAGGTCTTCACGTAAATTATACCAATTAATTTTCTATTTTATGTTCTGTAGAAAATATCATTTTATTAAATTTATTTTAATTTAATAAATTATATTTTACATACATGTTTGAGGTTATTTGTGATGAAAATTTTGGTTTTCTTGAAATATCTCATAAATACAACGTGAAAATAGGCATCGCCAGTGCAGTGCATTTCTCAATTATTTTCTTCAAAAGCTTAATTATCCTTTTTTAACTGGGAAGTTAAAATTGTAGCTTAGTTCTATGGTAGAGTTTAACTCAAACCTAACTTCTACCGAATTCCTTCAAACTCGCTTTCCTTGGGTGTAACAATTGCTCAAAATCATCAAACAACATCCTCGAATCTTCCATTTTAATGCTATGTTTTGCTGTAAACAACTAACTACCTCCCCTTAAAGATCATAGCCCAAGTTTCATGGTTGCAAATTGGAAACTATTTTTGTAGCCCCACTGAATGGGCTTTTTTGTATATCTTTTAGATTATTTCATTCATCAATGAATTCGTTTCTTATAAAAAAAAACATATATGTATAAAAATCTTCCTTTTCATCCCATGTTTCTTCAGATTTGGAGTTGTCTCTTGCTCTCTCATTGTACGGCAATGACCTTCACTCACCGTGAAGAAAACACGAGGGTTTTTGAAAAATGCCTGTTGTTTCTAAGAATTGTCCAAGCATGTAGCATTATCTTTTTAAAGTACAAAAAAAGAAGGAAAAAAAAAAAAAAATTCAACGTGGCATGTTTGTACATGCTGTGTGGTGCATAGTTGTGTTGGTTATTTCAATTAGTGTCCAAAATGTGCCTATGTCCAGGTCTGTGGAAGTACCACCTTTGGGCCTTGTCTAGGTACGCAGAACTGTGTCCAAGAATTTGAAGCTACATCAGGACAGTGTTAGCGCCTTCATGCATGTACGCTCTAGTTGTTGAGCTCAGGCATTTGACCTTGGGGAACTGTCAGTGCTTCCCAGGCTTCCATTTTTAGGCCAAAGCCATACATTATCCAATGTCGTACAAACTTCCAGTTATGAGGCTAAACCAACGTATTTATAGCTCTGGCCAGATTGATTTGGATTTTAGTGTACTGTCTTCGAATTTGTTTAAAATTTCCTATGTTATTCAATAAAATGGTTATCCTATTCAAGCAAATTGCTTGTCTTGAGTCATCATTTTATATGATTGACTCATAAATTTCAGGTATCTCCCTTCAAAATGAACTGTACTTCCTAAATGAATCCTTTGCTTATTGAGTATGAGTAGTGCATATGTTCTGTGAAACACGTGTGAACCTTGGTTGGTCTTTTAATCCTTGTCTTAGACAGGTGTTCTGCTAAACATTTTTCTGTTAAGAAAAATTCCACCTTGCTTGACATTTTTTCATTGGAATATTATCAGTTCTTAATATCGGTATGTTTTGTTCTATATATATATATATAAAATATTTTGTTAAGAATTGACCTTTTATTTATTGAAAAGGTTACAGTCTATGTGTTCTACACTTCTAGTGTCCCCTTTACTCAACTCTGGAACATATTCTCCTTTGCAGTGAGTCATACTGGACCAGGAGTTGTCAGCATGGCAAATGCAGGTCCAAATACTAATGGAAGTCAATTTTTCATATGCACTGTCAAGGTACTGTGCGCATAAACTTCGACCATGATATTATAGTCAGCAGCTAGCTCTAGCTCATATAATTATAATGCCTAGTTGTGTTCCTCTACATGGCAATGGTCTCCTTGGGGGAAGAATACGAGTTACACTTATTCTAATATGCTTATTTAACTGCAGTTTTGGATTTAGTATAAGTTTATTGAACTTGAAAATGGAGACAATTTGCTGAACCAGCAGCGTCCACCAGGTTTTCGGAAAATTGCTTGATTAATTTTCAATTTTAATGACTGGAAGTAATCCTTTTTTTCATTTCGTTTATCTTCTTTTTCATTGAGAATATAGTATTACAAATATGGAGTAGAGATTTGAACCTTTGATCTTTAGAAAAAAGTTATTAATACCTTGATCGTTAAACTGCCTTCTTCTTGCTCCGTGATGGTGTTTCAGTGAAATACTTGGAGTTGCTATTTGTTGATGCATTTTGGCACAATATCAATGGGTGTGTTGGATATTACATGCAGTATGCAGCCTTGTAGGAATTAGATGAGATTTTTGTATGCCCCTAAATGATTAATGACCCACCCCAAAAACAAATGGAAATTACCCTTCTGATTACGTCAAAGTACACAAGCACATGTGATATAGTAAACGTTAGGGACGTCTCTTCCATCGTAGTCCTAATCCAATGGTCATGTCTATCACAATTTTCATTGTTTTCTTTTGTTGCTAACCCGAAAGCACTTTGATGATGAAAACCCAGCAAAGTTGCTAAAAAAAGAAAACAATGAAAATTACGATAGACATGACCATCGGATTAGGACTACGACAGAAAAGACATCCCTAATGCGATATTGTATAAAATGGGGTAGTGCGCTTTAACATTAGCAGAAGGTTAGTTTTCATTTGTTTTTTAGGGGTGGGTCATTAATCACTAGGCCCTTGGGAGAGGGTCAAGGTCATCTGTATAAAAATTTCAAATTAGATTGTCTCATAAAAGCTTTTAGTTGAGATGTGTTGCTTTTGGTTCTACACAATCTACTTCTCTTCTGTCTCAATAGATTATGTGTTATTTGGTTGGCCAAGTCCTTATTTTTGCATCTATTGCGTGAATGTTAGACCCCATGGCTGGATAAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGATTCGACATTGTTAAGCTAATTGAGTCTCAAGAAACAGACCGTGGGGACCGACCATTGAAGAAGGTTGTCATCAGCGACTGCGGCGAGCTTCCAGTGGCCTGATTTTACCATATATCCAGATAACTAATCCTATCTTGTTCTCCTTTGGATTAGCTTAATCTTAGTTCAAATGGCCTTTCTTTGAGTCTTTTTGCTTGTAAAATCTATTGTTGGTGAAATTTAGCTCGGGAAGCGGGATTTTATTTGATGAAATTTGATGATGTTTGTGACAGCCACGAGGTTACTTTTTTTT

mRNA sequence

CTCTCCTCTCCTTTTCACTTTCCAGCACAAATCTCCATCCATGGCGGCTTCTTTTGCTACTACGCCTCTGGTTGGCTTCGTTTCTGCTTACAATACCGTCTCGCAAACCAAAGCTTCAGGCCCGTCTAATTCGGTTAAGCTTCATACGCTTCAATTGCCTTCGAATCTTTCGTCCTCGTCCAGTTTTCTGCCCGCTTCGTTGCGTTTTCCTTCTCTGACAACTTCTTTCAATCCGTTGTCTTCGAGGAATGCTGTTCGTAGCTCCGTCCGAGCTAGTGCTGAGGTACCTCCTCTACAAGCCAAAGTAACAAACAAGGTATATTTCGATGTGAGCATTGGTAATCCAGTAGGGAAACTTGCTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTCCCCAAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGAGAGAAGGGCTTTGGATTCAAAGGTTCTGCCTTTCATCGTGTAATCAGAGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGTACGCAGAACTGTGTCCAAGAATTTGAAGCTACATCAGGACAGTGTTAGCGCCTTCATGCATGTTACAGTCTATGTGTTCTACACTTCTAGTGTCCCCTTTACTCAACTCTGGAACATATTCTCCTTTGCAGTGAGTCATACTGGACCAGGAGTTGTCAGCATGGCAAATGCAGGTCCAAATACTAATGGAAGTCAATTTTTCATATGCACTGTCAAGACCCCATGGCTGGATAAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGATTCGACATTGTTAAGCTAATTGAGTCTCAAGAAACAGACCGTGGGGACCGACCATTGAAGAAGGTTGTCATCAGCGACTGCGGCGAGCTTCCAGTGGCCTGATTTTACCATATATCCAGATAACTAATCCTATCTTGTTCTCCTTTGGATTAGCTTAATCTTAGTTCAAATGGCCTTTCTTTGAGTCTTTTTGCTTGTAAAATCTATTGTTGGTGAAATTTAGCTCGGGAAGCGGGATTTTATTTGATGAAATTTGATGATGTTTGTGACAGCCACGAGGTTACTTTTTTTT

Coding sequence (CDS)

ATGGCGGCTTCTTTTGCTACTACGCCTCTGGTTGGCTTCGTTTCTGCTTACAATACCGTCTCGCAAACCAAAGCTTCAGGCCCGTCTAATTCGGTTAAGCTTCATACGCTTCAATTGCCTTCGAATCTTTCGTCCTCGTCCAGTTTTCTGCCCGCTTCGTTGCGTTTTCCTTCTCTGACAACTTCTTTCAATCCGTTGTCTTCGAGGAATGCTGTTCGTAGCTCCGTCCGAGCTAGTGCTGAGGTACCTCCTCTACAAGCCAAAGTAACAAACAAGGTATATTTCGATGTGAGCATTGGTAATCCAGTAGGGAAACTTGCTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTCCCCAAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGAGAGAAGGGCTTTGGATTCAAAGGTTCTGCCTTTCATCGTGTAATCAGAGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGTACGCAGAACTGTGTCCAAGAATTTGAAGCTACATCAGGACAGTGTTAGCGCCTTCATGCATGTTACAGTCTATGTGTTCTACACTTCTAGTGTCCCCTTTACTCAACTCTGGAACATATTCTCCTTTGCAGTGAGTCATACTGGACCAGGAGTTGTCAGCATGGCAAATGCAGGTCCAAATACTAATGGAAGTCAATTTTTCATATGCACTGTCAAGACCCCATGGCTGGATAAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGATTCGACATTGTTAAGCTAATTGAGTCTCAAGAAACAGACCGTGGGGACCGACCATTGAAGAAGGTTGTCATCAGCGACTGCGGCGAGCTTCCAGTGGCCTGA

Protein sequence

MAASFATTPLVGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA

Homology

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BLAST of CaUC06G106960 vs. NCBI nr
Match: XP_038875935.1 (photosynthetic NDH subunit of lumenal location 5, chloroplastic [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 1.1e-113
Identity = 224/284 (78.87%), Postives = 235/284 (82.75%), Query Frame = 0


Query: 1   MAASFATTPLVGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 60
           MAA FAT+PLVG  S  NTVSQTKAS P NSV LH +Q PSNLSSSSSFL  SL FPSLT
Sbjct: 1   MAAPFATSPLVGLASGSNTVSQTKASAPFNSVNLHRVQSPSNLSSSSSFLSGSLHFPSLT 60

Query: 61  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120
           TSFNPLSSR AVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSFNPLSSRIAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 121 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAF 180
           KTAENFRALCTGEKGFGFKGSAFHRVI+DFMIQGGDFDKGN   T  K++          
Sbjct: 121 KTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGN--GTGGKSI---------- 180

Query: 181 MHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDK 240
                         + + +   +F +SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLD+
Sbjct: 181 --------------YGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQ 240

Query: 241 RHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           RHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA
Sbjct: 241 RHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 258

[Close]

BLAST of CaUC06G106960 vs. NCBI nr
Match: XP_022991375.1 (photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita maxima] >XP_022991376.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-106
Identity = 215/286 (75.17%), Postives = 233/286 (81.47%), Query Frame = 0


Query: 1   MAASFATTPL--VGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPS 60
           MAA FATTPL  VG +S  N+ SQT+A GP NSV LH +QLPSNLSS+SSFL  SL+FPS
Sbjct: 1   MAAPFATTPLSKVGLLSCSNSASQTRAYGPCNSVNLHRVQLPSNLSSASSFLCGSLQFPS 60

Query: 61  LTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120
           L TS+NPLSSR AVRSSVRASAEV P QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD
Sbjct: 61  LRTSWNPLSSRTAVRSSVRASAEVVP-QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVS 180
           VPKTAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGN   T  K++        
Sbjct: 121 VPKTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGN--GTGGKSI-------- 180

Query: 181 AFMHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWL 240
                           + + +   +F +SHTGPGVVSMANAGPNTNGSQFFICTVKTPWL
Sbjct: 181 ----------------YGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWL 240

Query: 241 DKRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           D+RHVVFGQVLEGFDIVK IE+QETDRGDRPLKKVVISDCGELPVA
Sbjct: 241 DQRHVVFGQVLEGFDIVKQIEAQETDRGDRPLKKVVISDCGELPVA 259

[Close]

BLAST of CaUC06G106960 vs. NCBI nr
Match: XP_022954376.1 (photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita moschata] >XP_022954377.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita moschata] >XP_023532804.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023532812.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7014639.1 Photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-105
Identity = 214/286 (74.83%), Postives = 231/286 (80.77%), Query Frame = 0


Query: 1   MAASFATTPL--VGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPS 60
           MAA FATTPL  VG +S  N+ SQT+A GP  SV LH +QLPSNLSS+SSFL  SL FPS
Sbjct: 1   MAAPFATTPLSKVGLLSCSNSASQTRAYGPRTSVNLHRVQLPSNLSSASSFLCGSLHFPS 60

Query: 61  LTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120
           L TS+NPLSSR AVRSSVRASAEV P QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD
Sbjct: 61  LRTSWNPLSSRTAVRSSVRASAEVVP-QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVS 180
           VPKTAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGN   T  K++        
Sbjct: 121 VPKTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGN--GTGGKSI-------- 180

Query: 181 AFMHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWL 240
                           + + +   +F +SHTGPGVVSMANAGPNTNGSQFFICTVKTPWL
Sbjct: 181 ----------------YGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWL 240

Query: 241 DKRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           D+RHVVFGQVLEGFDIVK IE+QETDRGDRPLKKVVISDCGELPVA
Sbjct: 241 DQRHVVFGQVLEGFDIVKQIEAQETDRGDRPLKKVVISDCGELPVA 259

[Close]

BLAST of CaUC06G106960 vs. NCBI nr
Match: XP_008459881.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucumis melo] >KAA0039834.1 photosynthetic NDH subunit of lumenal location 5 [Cucumis melo var. makuwa] >TYK24665.1 photosynthetic NDH subunit of lumenal location 5 [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-104
Identity = 213/284 (75.00%), Postives = 226/284 (79.58%), Query Frame = 0


Query: 1   MAASFATTPLVGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 60
           MA+S AT PLV F S     S TKA GPSNSVKLH L+LP    SSSSFL  SL FPSLT
Sbjct: 1   MASSLATRPLVAFASG----SHTKAWGPSNSVKLHMLRLP----SSSSFLSGSLHFPSLT 60

Query: 61  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120
           TS NPLSSR +VRS VRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSLNPLSSRISVRSFVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 121 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAF 180
           KTAENFRALCTGEKGFGFKGSAFHRVI+DFMIQGGDFDKGN   T  K++          
Sbjct: 121 KTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGN--GTGGKSI---------- 180

Query: 181 MHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDK 240
                         + + +   +F +SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLD+
Sbjct: 181 --------------YGRTFKDENFNLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQ 240

Query: 241 RHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           RHVVFGQVLEGF+ VKLIESQETDRGDRPLKKVVISDCGELPVA
Sbjct: 241 RHVVFGQVLEGFETVKLIESQETDRGDRPLKKVVISDCGELPVA 250

[Close]

BLAST of CaUC06G106960 vs. NCBI nr
Match: XP_004140542.1 (photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucumis sativus] >KGN46438.1 hypothetical protein Csa_005347 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 9.9e-104
Identity = 212/284 (74.65%), Postives = 222/284 (78.17%), Query Frame = 0


Query: 1   MAASFATTPLVGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 60
           MAAS  TTPLV F S     S TKASGPSNSVKLH LQ P    SSSSFL  SL FPSLT
Sbjct: 1   MAASLPTTPLVAFASG----SDTKASGPSNSVKLHRLQFP----SSSSFLSGSLHFPSLT 60

Query: 61  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120
           TS NPLSSR  VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSLNPLSSRIVVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 121 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAF 180
           KTAENFRALCTGEKGFGFKGS FHRVI DFMIQGGDF+KGN   T  K++          
Sbjct: 121 KTAENFRALCTGEKGFGFKGSVFHRVIEDFMIQGGDFEKGN--GTGGKSI---------- 180

Query: 181 MHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDK 240
                         + + +   +F +SHTGPG+VSMANAGPNTNGSQFFICTVKT WLD 
Sbjct: 181 --------------YGRTFKDENFNLSHTGPGIVSMANAGPNTNGSQFFICTVKTQWLDL 240

Query: 241 RHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           RHVVFGQVLEGF+IVKLIESQETDR DRPLKKVVISDCGELPVA
Sbjct: 241 RHVVFGQVLEGFEIVKLIESQETDRADRPLKKVVISDCGELPVA 250

[Close]

BLAST of CaUC06G106960 vs. ExPASy Swiss-Prot
Match: Q9ASS6 (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL5 PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-73
Identity = 151/257 (58.75%), Postives = 181/257 (70.43%), Query Frame = 0


Query: 29  SNSVKLHTLQLPSNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAE-VPPLQA 88
           S S +L T     ++S SSS  P S     L TS+   + RN    SV+++AE V   Q+
Sbjct: 31  STSFRLRTKSSFDSISFSSS-TPFSASSLLLHTSY---TKRNHRCFSVQSNAEVVTEPQS 90

Query: 89  KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 148
           K+T+KVYFD+S+GNPVGKLAGRIVIGL+GDDVP+T ENFRALCTGEKGFG+KGS FHRVI
Sbjct: 91  KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 150

Query: 149 RDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTSSVPFTQLWNIFSFAVS 208
           RDFMIQGGDF+KGN     S   +  +D                           +F +S
Sbjct: 151 RDFMIQGGDFEKGNGTGGKSVYGRTFKDE--------------------------NFKLS 210

Query: 209 HTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEGFDIVKLIESQETDRGD 268
           H GPGV+SMANAGPNTNGSQFFICT+KT WLD RHVVFGQV+EG ++VKLIE QETDRGD
Sbjct: 211 HVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGD 257

Query: 269 RPLKKVVISDCGELPVA 285
           RP KKVVI+DCG+LP++
Sbjct: 271 RPRKKVVIADCGQLPMS 257

[Close]

BLAST of CaUC06G106960 vs. ExPASy Swiss-Prot
Match: P34791 (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.0e-58
Identity = 118/212 (55.66%), Postives = 141/212 (66.51%), Query Frame = 0


Query: 72  VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCT 131
           V+S      EV   QAKVTNKVYFDV IG   G++AGRIV+GLFG+ VPKT ENFRALCT
Sbjct: 76  VKSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVENFRALCT 135

Query: 132 GEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTS 191
           GEK +G+KGS+FHR+I+DFMIQGGDF +GN    +S      +D                
Sbjct: 136 GEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDE--------------- 195

Query: 192 SVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEG 251
                      +F + HTGPG++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV+EG
Sbjct: 196 -----------NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEG 255

Query: 252 FDIVKLIESQETDRGDRPLKKVVISDCGELPV 284
             +V+ +ESQET   D P K   I  CGELP+
Sbjct: 256 MKLVRTLESQETRAFDVPKKGCRIYACGELPL 258

[Close]

BLAST of CaUC06G106960 vs. ExPASy Swiss-Prot
Match: Q41651 (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-53
Identity = 123/244 (50.41%), Postives = 150/244 (61.48%), Query Frame = 0


Query: 41  SNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIG 100
           S LSS+  + P      S  +    ++SR    +S  A  EV  LQAKVT+K++FD+ IG
Sbjct: 35  SKLSSTYHYAPR--LSVSQQSKAKSITSRRITCAS-GAQGEVAELQAKVTSKIFFDIEIG 94

Query: 101 NPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKG 160
              G+ AGRIVIGLFGD VPKT ENF+ L TG KG+G++GS FHR+I +FMIQGGDF +G
Sbjct: 95  ---GESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEG 154

Query: 161 NVRRTVSKNLKLHQDSVSAFMHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAG 220
           N    VS      +D                           SF + H GPGV+SMANAG
Sbjct: 155 NGTGGVSIYGSKFEDE--------------------------SFDLKHVGPGVLSMANAG 214

Query: 221 PNTNGSQFFICTVKTPWLDKRHVVFGQVLEGFDIVKLIESQETDRGDR-PLKKVVISDCG 280
           PNTNGSQFFICTV TPWLD RHVVFG V+EG D+VK +ESQET + D  P K   I+  G
Sbjct: 215 PNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSKLDNSPKKPCKIAKSG 246

Query: 281 ELPV 284
           ELP+
Sbjct: 275 ELPL 246

[Close]

BLAST of CaUC06G106960 vs. ExPASy Swiss-Prot
Match: Q01490 (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 GN=CYPB PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.0e-51
Identity = 106/197 (53.81%), Postives = 134/197 (68.02%), Query Frame = 0


Query: 88  KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 147
           KVTNKVYFD+  G+   K  GRIV+GL+G+ VPKT ENFRAL TGEKG+G+K S FHRVI
Sbjct: 27  KVTNKVYFDIKQGD---KDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVI 86

Query: 148 RDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTSSVPFTQLWNIFSFAVS 207
           +DFMIQGGDF +G+   T  K++                        + + +   +F + 
Sbjct: 87  KDFMIQGGDFTRGD--GTGGKSI------------------------YGERFADENFKLR 146

Query: 208 HTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEGFDIVKLIESQETDRGD 267
           HTGPG++SMANAG +TNGSQFFI TV T WLD RHVVFG+V+EG D+V  IE+ +T  GD
Sbjct: 147 HTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPGD 194

Query: 268 RPLKKVVISDCGELPVA 285
           RP   V+I+DCGELPV+
Sbjct: 207 RPATPVIIADCGELPVS 194

[Close]

BLAST of CaUC06G106960 vs. ExPASy Swiss-Prot
Match: P24367 (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus OX=9031 GN=PPIB PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.6e-50
Identity = 107/196 (54.59%), Postives = 130/196 (66.33%), Query Frame = 0


Query: 88  KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 147
           KVT KV+FD+ +G    + AGR+VIGLFG  VPKT ENF AL TGEKGFGFKGS FHRVI
Sbjct: 32  KVTAKVFFDLRVGE---EDAGRVVIGLFGKTVPKTVENFVALATGEKGFGFKGSKFHRVI 91

Query: 148 RDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTSSVPFTQLWNIFSFAVS 207
           +DFMIQGGDF +G+   T  K++                  Y    P        +F + 
Sbjct: 92  KDFMIQGGDFTRGD--GTGGKSI------------------YGDRFPDE------NFKLK 151

Query: 208 HTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEGFDIVKLIESQETDRGD 267
           H GPG VSMANAG +TNGSQFFI TVKT WLD +HVVFG+VLEG D+V+ +E+ +TD  D
Sbjct: 152 HYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRD 198

Query: 268 RPLKKVVISDCGELPV 284
           +PLK V I+DCG + V
Sbjct: 212 KPLKDVTIADCGTIEV 198

[Close]

BLAST of CaUC06G106960 vs. ExPASy TrEMBL
Match: A0A6J1JQJ8 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111488028 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.9e-107
Identity = 215/286 (75.17%), Postives = 233/286 (81.47%), Query Frame = 0


Query: 1   MAASFATTPL--VGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPS 60
           MAA FATTPL  VG +S  N+ SQT+A GP NSV LH +QLPSNLSS+SSFL  SL+FPS
Sbjct: 1   MAAPFATTPLSKVGLLSCSNSASQTRAYGPCNSVNLHRVQLPSNLSSASSFLCGSLQFPS 60

Query: 61  LTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120
           L TS+NPLSSR AVRSSVRASAEV P QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD
Sbjct: 61  LRTSWNPLSSRTAVRSSVRASAEVVP-QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVS 180
           VPKTAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGN   T  K++        
Sbjct: 121 VPKTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGN--GTGGKSI-------- 180

Query: 181 AFMHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWL 240
                           + + +   +F +SHTGPGVVSMANAGPNTNGSQFFICTVKTPWL
Sbjct: 181 ----------------YGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWL 240

Query: 241 DKRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           D+RHVVFGQVLEGFDIVK IE+QETDRGDRPLKKVVISDCGELPVA
Sbjct: 241 DQRHVVFGQVLEGFDIVKQIEAQETDRGDRPLKKVVISDCGELPVA 259

[Close]

BLAST of CaUC06G106960 vs. ExPASy TrEMBL
Match: A0A6J1GQU2 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111456632 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 5.1e-106
Identity = 214/286 (74.83%), Postives = 231/286 (80.77%), Query Frame = 0


Query: 1   MAASFATTPL--VGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPS 60
           MAA FATTPL  VG +S  N+ SQT+A GP  SV LH +QLPSNLSS+SSFL  SL FPS
Sbjct: 1   MAAPFATTPLSKVGLLSCSNSASQTRAYGPRTSVNLHRVQLPSNLSSASSFLCGSLHFPS 60

Query: 61  LTTSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120
           L TS+NPLSSR AVRSSVRASAEV P QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD
Sbjct: 61  LRTSWNPLSSRTAVRSSVRASAEVVP-QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVS 180
           VPKTAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGN   T  K++        
Sbjct: 121 VPKTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGN--GTGGKSI-------- 180

Query: 181 AFMHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWL 240
                           + + +   +F +SHTGPGVVSMANAGPNTNGSQFFICTVKTPWL
Sbjct: 181 ----------------YGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWL 240

Query: 241 DKRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           D+RHVVFGQVLEGFDIVK IE+QETDRGDRPLKKVVISDCGELPVA
Sbjct: 241 DQRHVVFGQVLEGFDIVKQIEAQETDRGDRPLKKVVISDCGELPVA 259

[Close]

BLAST of CaUC06G106960 vs. ExPASy TrEMBL
Match: A0A5D3DM20 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002150 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 7.4e-105
Identity = 213/284 (75.00%), Postives = 226/284 (79.58%), Query Frame = 0


Query: 1   MAASFATTPLVGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 60
           MA+S AT PLV F S     S TKA GPSNSVKLH L+LP    SSSSFL  SL FPSLT
Sbjct: 1   MASSLATRPLVAFASG----SHTKAWGPSNSVKLHMLRLP----SSSSFLSGSLHFPSLT 60

Query: 61  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120
           TS NPLSSR +VRS VRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSLNPLSSRISVRSFVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 121 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAF 180
           KTAENFRALCTGEKGFGFKGSAFHRVI+DFMIQGGDFDKGN   T  K++          
Sbjct: 121 KTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGN--GTGGKSI---------- 180

Query: 181 MHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDK 240
                         + + +   +F +SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLD+
Sbjct: 181 --------------YGRTFKDENFNLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQ 240

Query: 241 RHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           RHVVFGQVLEGF+ VKLIESQETDRGDRPLKKVVISDCGELPVA
Sbjct: 241 RHVVFGQVLEGFETVKLIESQETDRGDRPLKKVVISDCGELPVA 250

[Close]

BLAST of CaUC06G106960 vs. ExPASy TrEMBL
Match: A0A1S3CBN7 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103498867 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 7.4e-105
Identity = 213/284 (75.00%), Postives = 226/284 (79.58%), Query Frame = 0


Query: 1   MAASFATTPLVGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 60
           MA+S AT PLV F S     S TKA GPSNSVKLH L+LP    SSSSFL  SL FPSLT
Sbjct: 1   MASSLATRPLVAFASG----SHTKAWGPSNSVKLHMLRLP----SSSSFLSGSLHFPSLT 60

Query: 61  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120
           TS NPLSSR +VRS VRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSLNPLSSRISVRSFVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 121 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAF 180
           KTAENFRALCTGEKGFGFKGSAFHRVI+DFMIQGGDFDKGN   T  K++          
Sbjct: 121 KTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGN--GTGGKSI---------- 180

Query: 181 MHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDK 240
                         + + +   +F +SHTGPGVVSMANAGPNTNGSQFFICTVKTPWLD+
Sbjct: 181 --------------YGRTFKDENFNLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQ 240

Query: 241 RHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           RHVVFGQVLEGF+ VKLIESQETDRGDRPLKKVVISDCGELPVA
Sbjct: 241 RHVVFGQVLEGFETVKLIESQETDRGDRPLKKVVISDCGELPVA 250

[Close]

BLAST of CaUC06G106960 vs. ExPASy TrEMBL
Match: A0A0A0KAE0 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G093090 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.8e-104
Identity = 212/284 (74.65%), Postives = 222/284 (78.17%), Query Frame = 0


Query: 1   MAASFATTPLVGFVSAYNTVSQTKASGPSNSVKLHTLQLPSNLSSSSSFLPASLRFPSLT 60
           MAAS  TTPLV F S     S TKASGPSNSVKLH LQ P    SSSSFL  SL FPSLT
Sbjct: 1   MAASLPTTPLVAFASG----SDTKASGPSNSVKLHRLQFP----SSSSFLSGSLHFPSLT 60

Query: 61  TSFNPLSSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120
           TS NPLSSR  VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP
Sbjct: 61  TSLNPLSSRIVVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVP 120

Query: 121 KTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAF 180
           KTAENFRALCTGEKGFGFKGS FHRVI DFMIQGGDF+KGN   T  K++          
Sbjct: 121 KTAENFRALCTGEKGFGFKGSVFHRVIEDFMIQGGDFEKGN--GTGGKSI---------- 180

Query: 181 MHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDK 240
                         + + +   +F +SHTGPG+VSMANAGPNTNGSQFFICTVKT WLD 
Sbjct: 181 --------------YGRTFKDENFNLSHTGPGIVSMANAGPNTNGSQFFICTVKTQWLDL 240

Query: 241 RHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGELPVA 285
           RHVVFGQVLEGF+IVKLIESQETDR DRPLKKVVISDCGELPVA
Sbjct: 241 RHVVFGQVLEGFEIVKLIESQETDRADRPLKKVVISDCGELPVA 250

[Close]

BLAST of CaUC06G106960 vs. TAIR 10
Match: AT5G13120.1 (cyclophilin 20-2 )

HSP 1 Score: 276.6 bits (706), Expect = 2.3e-74
Identity = 151/257 (58.75%), Postives = 181/257 (70.43%), Query Frame = 0


Query: 29  SNSVKLHTLQLPSNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAE-VPPLQA 88
           S S +L T     ++S SSS  P S     L TS+   + RN    SV+++AE V   Q+
Sbjct: 31  STSFRLRTKSSFDSISFSSS-TPFSASSLLLHTSY---TKRNHRCFSVQSNAEVVTEPQS 90

Query: 89  KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 148
           K+T+KVYFD+S+GNPVGKLAGRIVIGL+GDDVP+T ENFRALCTGEKGFG+KGS FHRVI
Sbjct: 91  KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 150

Query: 149 RDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTSSVPFTQLWNIFSFAVS 208
           RDFMIQGGDF+KGN     S   +  +D                           +F +S
Sbjct: 151 RDFMIQGGDFEKGNGTGGKSVYGRTFKDE--------------------------NFKLS 210

Query: 209 HTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEGFDIVKLIESQETDRGD 268
           H GPGV+SMANAGPNTNGSQFFICT+KT WLD RHVVFGQV+EG ++VKLIE QETDRGD
Sbjct: 211 HVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGD 257

Query: 269 RPLKKVVISDCGELPVA 285
           RP KKVVI+DCG+LP++
Sbjct: 271 RPRKKVVIADCGQLPMS 257

[Close]

BLAST of CaUC06G106960 vs. TAIR 10
Match: AT5G13120.2 (cyclophilin 20-2 )

HSP 1 Score: 276.6 bits (706), Expect = 2.3e-74
Identity = 151/257 (58.75%), Postives = 181/257 (70.43%), Query Frame = 0


Query: 29  SNSVKLHTLQLPSNLSSSSSFLPASLRFPSLTTSFNPLSSRNAVRSSVRASAE-VPPLQA 88
           S S +L T     ++S SSS  P S     L TS+   + RN    SV+++AE V   Q+
Sbjct: 27  STSFRLRTKSSFDSISFSSS-TPFSASSLLLHTSY---TKRNHRCFSVQSNAEVVTEPQS 86

Query: 89  KVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVI 148
           K+T+KVYFD+S+GNPVGKLAGRIVIGL+GDDVP+T ENFRALCTGEKGFG+KGS FHRVI
Sbjct: 87  KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146

Query: 149 RDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTSSVPFTQLWNIFSFAVS 208
           RDFMIQGGDF+KGN     S   +  +D                           +F +S
Sbjct: 147 RDFMIQGGDFEKGNGTGGKSVYGRTFKDE--------------------------NFKLS 206

Query: 209 HTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEGFDIVKLIESQETDRGD 268
           H GPGV+SMANAGPNTNGSQFFICT+KT WLD RHVVFGQV+EG ++VKLIE QETDRGD
Sbjct: 207 HVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGD 253

Query: 269 RPLKKVVISDCGELPVA 285
           RP KKVVI+DCG+LP++
Sbjct: 267 RPRKKVVIADCGQLPMS 253

[Close]

BLAST of CaUC06G106960 vs. TAIR 10
Match: AT3G62030.1 (rotamase CYP 4 )

HSP 1 Score: 226.1 bits (575), Expect = 3.6e-59
Identity = 118/212 (55.66%), Postives = 141/212 (66.51%), Query Frame = 0


Query: 72  VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCT 131
           V+S      EV   QAKVTNKVYFDV IG   G++AGRIV+GLFG+ VPKT ENFRALCT
Sbjct: 76  VKSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVENFRALCT 135

Query: 132 GEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTS 191
           GEK +G+KGS+FHR+I+DFMIQGGDF +GN    +S      +D                
Sbjct: 136 GEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDE--------------- 195

Query: 192 SVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEG 251
                      +F + HTGPG++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV+EG
Sbjct: 196 -----------NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEG 255

Query: 252 FDIVKLIESQETDRGDRPLKKVVISDCGELPV 284
             +V+ +ESQET   D P K   I  CGELP+
Sbjct: 256 MKLVRTLESQETRAFDVPKKGCRIYACGELPL 258

[Close]

BLAST of CaUC06G106960 vs. TAIR 10
Match: AT3G62030.2 (rotamase CYP 4 )

HSP 1 Score: 226.1 bits (575), Expect = 3.6e-59
Identity = 118/212 (55.66%), Postives = 141/212 (66.51%), Query Frame = 0


Query: 72  VRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDDVPKTAENFRALCT 131
           V+S      EV   QAKVTNKVYFDV IG   G++AGRIV+GLFG+ VPKT ENFRALCT
Sbjct: 129 VKSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVENFRALCT 188

Query: 132 GEKGFGFKGSAFHRVIRDFMIQGGDFDKGNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTS 191
           GEK +G+KGS+FHR+I+DFMIQGGDF +GN    +S      +D                
Sbjct: 189 GEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDE--------------- 248

Query: 192 SVPFTQLWNIFSFAVSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDKRHVVFGQVLEG 251
                      +F + HTGPG++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV+EG
Sbjct: 249 -----------NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEG 308

Query: 252 FDIVKLIESQETDRGDRPLKKVVISDCGELPV 284
             +V+ +ESQET   D P K   I  CGELP+
Sbjct: 309 MKLVRTLESQETRAFDVPKKGCRIYACGELPL 311

[Close]

BLAST of CaUC06G106960 vs. TAIR 10
Match: AT3G62030.3 (rotamase CYP 4 )

HSP 1 Score: 224.9 bits (572), Expect = 7.9e-59
Identity = 126/244 (51.64%), Postives = 153/244 (62.70%), Query Frame = 0


Query: 45  SSSSFLPASLRFPSLTTSFNPL-----SSRNAVRSSVRASAEVPPLQAKVTNKVYFDVSI 104
           SS   L + L + S    F+ +       R A   S+ A  EV   QAKVTNKVYFDV I
Sbjct: 43  SSGIALSSRLHYASPIKQFSGVYATTKHQRTACVKSMAAEEEVIEPQAKVTNKVYFDVEI 102

Query: 105 GNPVGKLAGRIVIGLFGDDVPKTAENFRALCTGEKGFGFKGSAFHRVIRDFMIQGGDFDK 164
           G   G++AGRIV+GLFG+ VPKT ENFRALCTGEK +G+KGS+FHR+I+DFMIQGGDF +
Sbjct: 103 G---GEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTE 162

Query: 165 GNVRRTVSKNLKLHQDSVSAFMHVTVYVFYTSSVPFTQLWNIFSFAVSHTGPGVVSMANA 224
           GN    +S      +D                           +F + HTGPG++SMANA
Sbjct: 163 GNGTGGISIYGAKFEDE--------------------------NFTLKHTGPGILSMANA 222

Query: 225 GPNTNGSQFFICTVKTPWLDKRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCG 284
           GPNTNGSQFFICTVKT WLD +HVVFGQV+EG  +V+ +ESQET   D P K   I  CG
Sbjct: 223 GPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACG 257

The following BLAST results are available for this feature:

BLAST of CaUC06G106960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875935.1	1.1e-113	78.87	photosynthetic NDH subunit of lumenal location 5, chloroplastic [Benincasa hispi...	[more]
XP_022991375.1	1.6e-106	75.17	photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita ...	[more]
XP_022954376.1	1.1e-105	74.83	photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita ...	[more]
XP_008459881.1	1.5e-104	75.00	PREDICTED: photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucu...	[more]
XP_004140542.1	9.9e-104	74.65	photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucumis sativus...	[more]

BLAST of CaUC06G106960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASS6	3.2e-73	58.75	Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis t...	[more]
P34791	5.0e-58	55.66	Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thalia...	[more]
Q41651	1.7e-53	50.41	Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV...	[more]
Q01490	2.0e-51	53.81	Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 ...	[more]
P24367	6.6e-50	54.59	Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus OX=9031 GN=PPIB PE=2 SV=1	[more]

BLAST of CaUC06G106960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQJ8	7.9e-107	75.17	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111488028 ...	[more]
A0A6J1GQU2	5.1e-106	74.83	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC11145663...	[more]
A0A5D3DM20	7.4e-105	75.00	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CBN7	7.4e-105	75.00	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103498867 PE=3...	[more]
A0A0A0KAE0	4.8e-104	74.65	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G093090 P...	[more]

BLAST of CaUC06G106960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13120.1	2.3e-74	58.75	cyclophilin 20-2	[more]
AT5G13120.2	2.3e-74	58.75	cyclophilin 20-2	[more]
AT3G62030.1	3.6e-59	55.66	rotamase CYP 4	[more]
AT3G62030.2	3.6e-59	55.66	rotamase CYP 4	[more]
AT3G62030.3	7.9e-59	51.64	rotamase CYP 4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 143..155 score: 78.12 coord: 212..227 score: 79.26 coord: 227..239 score: 72.57 coord: 240..255 score: 55.18 coord: 114..129 score: 68.56
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 107..279 e-value: 1.3E-44 score: 152.2
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 104..280 score: 37.109314
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 79..284 e-value: 1.3E-66 score: 225.7
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 83..281
None	No IPR available	PANTHER	PTHR11071:SF420	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC	coord: 69..283
None	No IPR available	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 69..283
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 138..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G106960.1	CaUC06G106960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016018	cyclosporin A binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity