CaUC06G106940 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCTAAGAAATCGACCCTCCAAGGTAAACAGAAAACGTAAACAATAGAGAATCAGACACAAAGACTTATGTGGTTCACTAACAATGTACTGGCTACATCCATGGCAGAAAAAGAGAACAGTTTTATTAGTAGAGAGAAAAATGTGAGAGATCAGATTATAGAAGCACCTCTAGAGTTGGAGAGTCTATAAGTGCACTCCTCTAAACCTTAGAGCCAAAATCGTAATAACGTAAGTAACATAATTATGAATACCAGAGACCCAGTTCTTGGTTGTTTGGGTATTAAGACATTCCAACATCAGAATTACGAGGAAAGCACAAACAGATTACAGAAGCCAGGGTGGTTGCCAACAAGCAGAGGCAAGTTGATGATGGGGGCGGTTGGTGTACAATGTAAGGTCAGCAAGCATTAACTATGGACTACATAGAAATTATTCAATTGTCCATTACCAAACATCGTGGTCCATAGGAGCATGGTCAAAGCAAGCCACTTTGGACTACATAGAAATTATTCAATTGTCCATTACCAAACATCGTGGTCCATAGGAGCATGGTCAAAGCAAGCCACTTTTCACTTTATTTATTTATTTTTATTTCATTGATCAAAGAGATTCAGTCTGTAACATTCACATCTGTTTTTGGATCATAGCCTACTGATTGTTTTCAGATTAATCAGCAGCCTACTGATGTATCTAATCCACACTTTAATCAGAATGATCAACACCTACCAAAGTCATATTTTATGTGTTTTTAGATGAGGCTTATCTTGTTGTTTTGAAGAAAAGTGGAGGGAAGTTGGAAAAGACTTTGCAACTTTTGGAAGAATCTTTAATGGCTGCATGTGCCACCCCTTCATCATATTCTATATTAGTCCCCACGATAAGGATGGAAATGCTAAAGATAAATTGTTTTAGGCTATTTTGACAATGACCCACTTTTAAATTTTGCTCCTTCTCTCTCTCTCTTCTTTGGTATTAGAGACATGAGTGTATTTGTTTAATGTGTTTCATTTTTCTTTTATGTTCGTTACCCTTAAAAGTTGTTTGTAAGTTTAGAAAGTAATAAATAAAAGAGATCAGTAAGTTCTAAAAATTGTCTCTGTCATTTTTCACATTTATAATGTACAAAGGATGAAAAAAGTATGGGAGAAACAGAATGATCAAACTGATAAGAGTTTGCCAATTGAAATAAGGACCACCTTATGTTCAGATAGTGGTCAAAGTTTTCACTTTGAGAGGAGCAAAATCAAAAGAATTTCTTTGGTTTTTTCACCTCTTTTGTTTGACTTAACCAAAGAGATACAACAAGGGGAAAAAAACAAATGTTGACATAACAATGTGGCTGCAGGCCCATGATACAAGAGAATCTATCCTCTCTTTCTCTCTTTTCCCTTGTGGTTATGAGAGCAAGAATGTCTTTTCCTTTGTATACTTCCAACCCACTACAACACATTCTTGTCATTTTCATTCTCATATCAATTCTCACTGTTATGGAGAGCCAAAGAGAGAGAGAGAGCTAAGAATGGAAGAGGAGTTTCAAGGGAGACCAACAGAGTTTCAACTGCAATGTTGCAGTGCAAGGATCATGTCCCCAGAGATCGTTGAGATTGGAGACGAAAGTAAGACGATTATTAGTAGCAGAGACGGTGGTGCAACCGACGTCTATGTCGCCGTTGGTAAAGATGATACAGATGTACTTAAATGGGCCCTTAATCATGCCATCTCACCTGGTTGTTGTGTCTTTCTTGTCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGGTAATCAAGATTTCAACTCTCTCTCTCTCTCTCTCTCTCTCTTTTCCATCTTTCAGATCATAACCAAAGATTTACAGATCAGTCAACAACTTTTCTAGACTGTTTTTCTTGCATAATCTACCTATAAAGGATGTATGATGCATATGAGCCATAAGGCAATGTCTATATTTTGTTCCTTGTGTTCCTTCCAAAAGAGTCAAACTCAAGCATAGATTGTAAACATAAATTCTTCTTTAGATGTTAGGATAGGAAGAAAACTAACTACAAAATGTGTTGATGGAACAAAACATGTTTTTGTTTATGCAATGGAAATTCTCTTCAAACACACAAGAAAAAGATATGATCAAGAGAACATTAGCATATTCATTGGATTGGAATTCATCTATGTTCATGAATTGCTATGAGTTGCAACATTTTTACCTGCAACCCCATATTTGGTTTCAGTTGGAAGATTAGCAAGGAGCCAACTAAGCCAAGAACAATTAAGAGTTTATATCAATGAAGAAAACAACAGAAGGAGAAATCTGTTGCAGAAATACATCCGCTTATGCACTGATGCCAAGGTGTTCCTAAATCACTCTCATCCCCCAATAAATAAATCTCATAAATCTCATAAGTACACATTTGGAAGTGATTTTGAAATAGTTAATATCACTTTTGTCCCGTTTATAATTACTCTAAAACATACCCGTATCACTCAAAATCAATTTAGTGTTTTATTCCCTACACGTTTAAATGCATTTTTCATAGTATTAAAATTGATTTTGAAAATTTGAAGGAATAAAAACACTTTCAAGTGGTTTTGAAAATGAGAAAAGTGATTTTGACTATTTCAGAATCACTCCCGAACACGTCTTAACCCGAAAAAACTAATTTGTTCAGGTGGCAGTGGACACATTGCTTCTAGAGAGCAACACAACAACCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACCAATTTGGTCATAGGGACCAAAAAGCCACTTTCCACCAGGTTTGGAACTTTTCTTTTTTTATTCATTTTGGGATTTTTTTTCCAAAGATTCTTGAAGGTATGACCCACTCCCAGCCGTGTGAATGTTGAATGACCCAGTTCTAAAAGATCTATGAAAACTAACATTCTGTATGAGCATTCGACCACTCATTGTCGGGTTAGAGACGTCTTACCCATCGTGAAATGGTTGGAACCCTAACATACCCCTTTGAGATTGGATTATTATTACAAAAACCTTTTTTTAATCAAATTTCCATATGATTTGTGCATTTTTTTTTTTTTTTTTGTTGAGTACAACAATTGTGGAGATGGAGATCAAACCTTCCACCTCTAGGATGGAAGACCATGCCAATTACCTCTGAACTAACCTTAATTTGAAAATTTGTGCAATTTGTTGATAGGCTATTAGGGAAAAGAATGGCGACAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGTGAGGTTACCATTGTTTATGAAGGCAAAAAAATGGATGATCAGCGTCAACAGGAAATGGGGTTGTTTTCTTCTTCTCAAGATTCCGATTGCCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGTGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGATGGGTTGTGTTCTGTTAATGCAATGAACAACAGAAGAAGAAGATGAGGATCACCATTTCTTACTTAACTTTTGGTTTGTTTTAATAAACCGATTGACATTGTGATGAAAGGCTACAGAAGAATCCCATATCAGCTAGCTTGTAATTTAGCGGCAGCAGC ATGGAGCTAAGAAATCGACCCTCCAAGTTCACTAACAATGTACTGGCTACATCCATGGCAGAAAAAGAGAACAGTTTTATTAGTAGAGAGAAAAATGTGAGAGATCAGATTATAGAAGCACCTCTAGAGTTGGAGAACATTCCAACATCAGAATTACGAGGAAAGCACAAACAGATTACAGAAGCCAGGGTGGTTGCCAACAAGCAGAGGCAAGTTGATGATGGGGGCGGTTGGTGTACAATAATGGAAGAGGAGTTTCAAGGGAGACCAACAGAGTTTCAACTGCAATGTTGCAGTGCAAGGATCATGTCCCCAGAGATCGTTGAGATTGGAGACGAAAGTAAGACGATTATTAGTAGCAGAGACGGTGGTGCAACCGACGTCTATGTCGCCGTTGGTAAAGATGATACAGATGTACTTAAATGGGCCCTTAATCATGCCATCTCACCTGGTTGTTGTGTCTTTCTTGTCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGTTGGAAGATTAGCAAGGAGCCAACTAAGCCAAGAACAATTAAGAGTTTATATCAATGAAGAAAACAACAGAAGGAGAAATCTGTTGCAGAAATACATCCGCTTATGCACTGATGCCAAGGTGGCAGTGGACACATTGCTTCTAGAGAGCAACACAACAACCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACCAATTTGGTCATAGGGACCAAAAAGCCACTTTCCACCAGGCTATTAGGGAAAAGAATGGCGACAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGTGAGGTTACCATTGTTTATGAAGGCAAAAAAATGGATGATCAGCGTCAACAGGAAATGGGGTTGTTTTCTTCTTCTCAAGATTCCGATTGCCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGTGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGATGGGTTGTGTTCTGTTAATGCAATGAACAACAGAAGAAGAAGATGAGGATCACCATTTCTTACTTAACTTTTGGTTTGTTTTAATAAACCGATTGACATTGTGATGAAAGGCTACAGAAGAATCCCATATCAGCTAGCTTGTAATTTAGCGGCAGCAGC ATGGAGCTAAGAAATCGACCCTCCAAGTTCACTAACAATGTACTGGCTACATCCATGGCAGAAAAAGAGAACAGTTTTATTAGTAGAGAGAAAAATGTGAGAGATCAGATTATAGAAGCACCTCTAGAGTTGGAGAACATTCCAACATCAGAATTACGAGGAAAGCACAAACAGATTACAGAAGCCAGGGTGGTTGCCAACAAGCAGAGGCAAGTTGATGATGGGGGCGGTTGGTGTACAATAATGGAAGAGGAGTTTCAAGGGAGACCAACAGAGTTTCAACTGCAATGTTGCAGTGCAAGGATCATGTCCCCAGAGATCGTTGAGATTGGAGACGAAAGTAAGACGATTATTAGTAGCAGAGACGGTGGTGCAACCGACGTCTATGTCGCCGTTGGTAAAGATGATACAGATGTACTTAAATGGGCCCTTAATCATGCCATCTCACCTGGTTGTTGTGTCTTTCTTGTCCATGTTTTTCCTCCTCTCACCTACATCCCTACACCAGTTGGAAGATTAGCAAGGAGCCAACTAAGCCAAGAACAATTAAGAGTTTATATCAATGAAGAAAACAACAGAAGGAGAAATCTGTTGCAGAAATACATCCGCTTATGCACTGATGCCAAGGTGGCAGTGGACACATTGCTTCTAGAGAGCAACACAACAACCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACCAATTTGGTCATAGGGACCAAAAAGCCACTTTCCACCAGGCTATTAGGGAAAAGAATGGCGACAGGAGAGTTTGTGAAAAAGAATGCACCAGAGTTTTGTGAGGTTACCATTGTTTATGAAGGCAAAAAAATGGATGATCAGCGTCAACAGGAAATGGGGTTGTTTTCTTCTTCTCAAGATTCCGATTGCCGGCGGCGGCGCTCCGGGAAGAACTTGTTCGAGTGTGTTTGCTTGTCGAGCAAGTCGGGTTGCGATTGA MELRNRPSKFTNNVLATSMAEKENSFISREKNVRDQIIEAPLELENIPTSELRGKHKQITEARVVANKQRQVDDGGGWCTIMEEEFQGRPTEFQLQCCSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDTDVLKWALNHAISPGCCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVAVDTLLLESNTTTKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMATGEFVKKNAPEFCEVTIVYEGKKMDDQRQQEMGLFSSSQDSDCRRRRSGKNLFECVCLSSKSGCD Homology
BLAST of CaUC06G106940 vs. NCBI nr
Match: XP_038876192.1 (U-box domain-containing protein 33-like [Benincasa hispida]) HSP 1 Score: 434.1 bits (1115), Expect = 1.0e-117 Identity = 222/241 (92.12%), Postives = 229/241 (95.02%), Query Frame = 0
BLAST of CaUC06G106940 vs. NCBI nr
Match: XP_023516951.1 (U-box domain-containing protein 33-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424.1 bits (1089), Expect = 1.1e-114 Identity = 216/240 (90.00%), Postives = 224/240 (93.33%), Query Frame = 0
BLAST of CaUC06G106940 vs. NCBI nr
Match: XP_022965037.1 (U-box domain-containing protein 33-like [Cucurbita moschata]) HSP 1 Score: 423.7 bits (1088), Expect = 1.4e-114 Identity = 216/240 (90.00%), Postives = 223/240 (92.92%), Query Frame = 0
BLAST of CaUC06G106940 vs. NCBI nr
Match: KAA0057823.1 (U-box domain-containing protein 33-like [Cucumis melo var. makuwa]) HSP 1 Score: 418.3 bits (1074), Expect = 5.9e-113 Identity = 214/240 (89.17%), Postives = 224/240 (93.33%), Query Frame = 0
BLAST of CaUC06G106940 vs. NCBI nr
Match: KAG6589422.1 (DEAD-box ATP-dependent RNA helicase 30, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 418.3 bits (1074), Expect = 5.9e-113 Identity = 213/236 (90.25%), Postives = 220/236 (93.22%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy Swiss-Prot
Match: Q9FKG6 (U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.9e-09 Identity = 47/143 (32.87%), Postives = 75/143 (52.45%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy Swiss-Prot
Match: Q8GUH1 (U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 6.4e-09 Identity = 43/155 (27.74%), Postives = 71/155 (45.81%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy Swiss-Prot
Match: Q9SW11 (U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 3.5e-07 Identity = 44/167 (26.35%), Postives = 79/167 (47.31%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy Swiss-Prot
Match: Q8GZ84 (U-box domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=PUB36 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 2.3e-06 Identity = 44/178 (24.72%), Postives = 81/178 (45.51%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy Swiss-Prot
Match: Q683D5 (U-box domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=PUB37 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 8.0e-04 Identity = 43/180 (23.89%), Postives = 73/180 (40.56%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy TrEMBL
Match: A0A6J1HJ95 (U-box domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111464982 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 6.8e-115 Identity = 216/240 (90.00%), Postives = 223/240 (92.92%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy TrEMBL
Match: A0A5A7UPM8 (U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001080 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 2.9e-113 Identity = 214/240 (89.17%), Postives = 224/240 (93.33%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy TrEMBL
Match: A0A6J1JDL7 (U-box domain-containing protein 33-like OS=Cucurbita maxima OX=3661 GN=LOC111484854 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 4.9e-113 Identity = 214/240 (89.17%), Postives = 221/240 (92.08%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy TrEMBL
Match: A0A0A0LNU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004060 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 4.9e-113 Identity = 212/240 (88.33%), Postives = 225/240 (93.75%), Query Frame = 0
BLAST of CaUC06G106940 vs. ExPASy TrEMBL
Match: A0A6J1C2N1 (U-box domain-containing protein 33-like OS=Momordica charantia OX=3673 GN=LOC111007380 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 4.9e-113 Identity = 216/241 (89.63%), Postives = 224/241 (92.95%), Query Frame = 0
BLAST of CaUC06G106940 vs. TAIR 10
Match: AT5G47740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26 Identity = 70/201 (34.83%), Postives = 124/201 (61.69%), Query Frame = 0
BLAST of CaUC06G106940 vs. TAIR 10
Match: AT5G47740.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 112.8 bits (281), Expect = 5.0e-25 Identity = 70/203 (34.48%), Postives = 124/203 (61.08%), Query Frame = 0
BLAST of CaUC06G106940 vs. TAIR 10
Match: AT5G65500.1 (U-box domain-containing protein kinase family protein ) HSP 1 Score: 66.2 bits (160), Expect = 5.3e-11 Identity = 53/157 (33.76%), Postives = 79/157 (50.32%), Query Frame = 0
BLAST of CaUC06G106940 vs. TAIR 10
Match: AT5G61550.1 (U-box domain-containing protein kinase family protein ) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-10 Identity = 47/143 (32.87%), Postives = 75/143 (52.45%), Query Frame = 0
BLAST of CaUC06G106940 vs. TAIR 10
Match: AT5G61550.2 (U-box domain-containing protein kinase family protein ) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-10 Identity = 47/143 (32.87%), Postives = 75/143 (52.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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