CaUC05G105450 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G105450
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr05: 35835544 .. 35837136 (+)
RNA-Seq ExpressionCaUC05G105450
SyntenyCaUC05G105450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTTTCTTCGTCAAAAAATCAGAATCCATTCCCAACTTTGCATTACAGCTTCCATTTACCATTAAGTCCGTCCACCTCACGTTTGTCCTCTCTGCCATAAGAGTCTAGCAAATTCGATGCACGGAGTATCCATAGTTTAGGGTCTGATTGTTGCTTGTGCTTGTGCAAAATACATATTTTTAACTCTGGCACAGGTGGCTTCATTATCTGTTCTCTTTGCTTCCTTCTCTTTTAGAAACTCAGTTTTAGTAAGTTTTACCATTCGTTTTTCAAAATTCTATGATTATGAATGTTGTATGGTGGATTACAGTCTCCATAGTCATTTATAAAACGATGAATTATGTAGTTTTTTATTGGATGTCTATCTTACAAATCTGTATTTGCAGGATTTTAAAGAGACAACTGCATTGGATCAAACTAATAGTTGAAGACGACAAGAAACTGCGTCTGCGGTTCAGCCAACTGGATGTAAGATCTCCGTCCTAGCTATTCTTCCATTCAAATATGTATATGTATTTGTGTGTTCATAAGTGCTGGTTCCATTTAGGCCTTCTAACAGAGGTTGACCCTTTCAACTATTGATTCTATCAATCTTACTGATTATCTACTGTTAGGCCATATTTGGATGTGTTAGATGATATAATATCAAATTTACCTTTACATATGCTTTTGAGTTGATCGGTGATTTAACATGGTATCAAAACATGTAACTCCTGGAATGTTATTTCCTTCCCAATTAATATTGATTTCCACTTATTAGTTCTTCTAAATTTTATTTCCTCTCCTATTAAAGTTGATTTTTACTTGTTGGGTTTTCTATATATTTCAAACCCACAAGTGAAGGAAAATGTTAAATAATATAATATTAAGTTAATCTTCACTGTTTAACTTAAGCTGATGAGTCAATTAGGGATTTAACAATATGTGGACTCGTTGATTAGTGTTCAGTTCCTTTTAGGCCCTCTAGCATAGTTCGGACCCTTCAATTGTTGATTCTTTCAATCCTCATACTCTTGAATTATATCACTACTTCAATGTTATGGCTTTCATTTTTTGTTTTCTTGATGAAAACTTCACAACTCCTGTTAACGGGTAGGAAAGACCACATGAATTTTATATATGAAATGTCAAGTTCCGGGAAAATGACATATTGTTTATATTTGCATTCTAAACTTTATACATGTTAGGTACATGTGAAGAAAATCTGCTATTGTCAGAACCAGAGATCTCTGAGGCCAGTTTGCTCTGTTTTCTGTACCAAGAGTTTCTTTCCCAATCACAGGTATTCCTTTCTTCTTTCCCTCTCATTTTTAATGAAGTAAAGACAAGATCATACTGTGGAAAGCTTTGCGGAGGAATAACATTACAAATTAAAGACCTGAAATAGGGAATTGTGGAGGAAGACAATAGTAAAATGGTAGTATTAGGAGCAAGTTGCAGCCTTCTATGGCTTGGCCCTGACGACGAGGTTTGGTTTGTTTCTGTGTTTGGAGATTGAATCCAATCCCTGAACTTGAAAATTTTGAGGAAAATTCCAAAAGTGGACAGCAAGGACTTTGGATGAGAATGCATTGGGGACCATATTGA

mRNA sequence

ATGGTGAGTTTCTTCGTCAAAAAATCAGAATCCATTCCCAACTTTGCATTACAGCTTCCATTTACCATTAAGTCCGTCCACCTCACGATTTTAAAGAGACAACTGCATTGGATCAAACTAATAGTTGAAGACGACAAGAAACTGCGTCTGCGGTTCAGCCAACTGGATGTACATGTGAAGAAAATCTGCTATTGTCAGAACCAGAGATCTCTGAGGCCAGTTTGCTCTGTTTTCTGTACCAAGAGTTTCTTTCCCAATCACAGATTGAATCCAATCCCTGAACTTGAAAATTTTGAGGAAAATTCCAAAAGTGGACAGCAAGGACTTTGGATGAGAATGCATTGGGGACCATATTGA

Coding sequence (CDS)

ATGGTGAGTTTCTTCGTCAAAAAATCAGAATCCATTCCCAACTTTGCATTACAGCTTCCATTTACCATTAAGTCCGTCCACCTCACGATTTTAAAGAGACAACTGCATTGGATCAAACTAATAGTTGAAGACGACAAGAAACTGCGTCTGCGGTTCAGCCAACTGGATGTACATGTGAAGAAAATCTGCTATTGTCAGAACCAGAGATCTCTGAGGCCAGTTTGCTCTGTTTTCTGTACCAAGAGTTTCTTTCCCAATCACAGATTGAATCCAATCCCTGAACTTGAAAATTTTGAGGAAAATTCCAAAAGTGGACAGCAAGGACTTTGGATGAGAATGCATTGGGGACCATATTGA

Protein sequence

MVSFFVKKSESIPNFALQLPFTIKSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFPNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY
Homology
[Close]
BLAST of CaUC05G105450 vs. NCBI nr
Match: XP_022956678.1 (uncharacterized protein LOC111458328 isoform X6 [Cucurbita moschata])

HSP 1 Score: 117.5 bits (293), Expect = 8.0e-23
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 0 

Query: 1   MVSFFVKKSESIPNFALQLPFTIKSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVK 60
           MVSFFVK++ES+P+F LQLP  + S      KR  HWIK  ++  +        LDVH K
Sbjct: 1   MVSFFVKETESVPDFELQLPLPLGS------KRPSHWIKQNLK-TQGATAAILPLDVHAK 60

Query: 61  KICYCQNQRSLRPVCSVFCTKSFFPNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY 119
           KIC+ +NQRS R VCSVFCT+SF  NHRL         EE S SGQQG W++MHWGPY
Sbjct: 61  KICHSRNQRSTRSVCSVFCTESFIRNHRL---------EEKSMSGQQGQWLKMHWGPY 102

[Close]
BLAST of CaUC05G105450 vs. NCBI nr
Match: XP_022956675.1 (uncharacterized protein LOC111458328 isoform X3 [Cucurbita moschata])

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-15
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 0 

Query: 24  KSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSF 83
           +S+  +  KR  HWIK  ++  +        LDVH KKIC+ +NQRS R VCSVFCT+SF
Sbjct: 54  RSIPFSGSKRPSHWIKQNLK-TQGATAAILPLDVHAKKICHSRNQRSTRSVCSVFCTESF 113

Query: 84  FPNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY 119
             NHRL         EE S SGQQG W++MHWGPY
Sbjct: 114 IRNHRL---------EEKSMSGQQGQWLKMHWGPY 138

[Close]
BLAST of CaUC05G105450 vs. NCBI nr
Match: XP_022965042.1 (uncharacterized protein LOC111500016 isoform X4 [Cucurbita maxima])

HSP 1 Score: 91.3 bits (225), Expect = 6.1e-15
Identity = 48/95 (50.53%), Postives = 58/95 (61.05%), Query Frame = 0 

Query: 24  KSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSF 83
           +S+  +  KR  HWIK  ++  +        LDVH  KI +C+NQRS R VCSVFCTKSF
Sbjct: 54  RSIPFSGYKRPSHWIKQNLK-TQGATAAILPLDVHGTKISHCRNQRSTRSVCSVFCTKSF 113

Query: 84  FPNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY 119
             NHRL         EE S SGQQG W++MHWGPY
Sbjct: 114 IRNHRL---------EEKSMSGQQGQWLKMHWGPY 138

[Close]
BLAST of CaUC05G105450 vs. NCBI nr
Match: KAG7032311.1 (Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-13
Identity = 46/89 (51.69%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 1  MVSFFVKKSESIPNFALQLPFTIKSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVK 60
          MVSFFVK++ES+P+F LQLP  + S      KR  HWIK  ++  +        LDVH K
Sbjct: 1  MVSFFVKETESVPDFELQLPLPLGS------KRPSHWIKQNLK-TQGATAAILPLDVHAK 60

Query: 61 KICYCQNQRSLRPVCSVFCTKSFFPNHRL 90
           IC+ +N+RS R VCSVFCT+SF  NHRL
Sbjct: 61 NICHSRNERSTRSVCSVFCTESFIRNHRL 82

[Close]
BLAST of CaUC05G105450 vs. NCBI nr
Match: KAG6601537.1 (hypothetical protein SDJN03_06770, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-12
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 0 

Query: 1   MVSFFVKKSESIPNFALQLPFTIKSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVK 60
           +VSFFVK++ES+P+F LQLP  + S      KR  HWIK  ++  +        LDVH K
Sbjct: 166 IVSFFVKETESVPDFELQLPLPLGS------KRPSHWIKQNLK-TQGATAAILPLDVHAK 225

Query: 61  KICYCQNQRSLRPVCSVFCTKSFFPNHR 89
            IC+ +NQRS R VCSVFCT+SF  NHR
Sbjct: 226 NICHSRNQRSTRSVCSVFCTESFIRNHR 246

[Close]
BLAST of CaUC05G105450 vs. ExPASy TrEMBL
Match: A0A6J1GXS7 (uncharacterized protein LOC111458328 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111458328 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-23
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 0 

Query: 1   MVSFFVKKSESIPNFALQLPFTIKSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVK 60
           MVSFFVK++ES+P+F LQLP  + S      KR  HWIK  ++  +        LDVH K
Sbjct: 1   MVSFFVKETESVPDFELQLPLPLGS------KRPSHWIKQNLK-TQGATAAILPLDVHAK 60

Query: 61  KICYCQNQRSLRPVCSVFCTKSFFPNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY 119
           KIC+ +NQRS R VCSVFCT+SF  NHRL         EE S SGQQG W++MHWGPY
Sbjct: 61  KICHSRNQRSTRSVCSVFCTESFIRNHRL---------EEKSMSGQQGQWLKMHWGPY 102

[Close]
BLAST of CaUC05G105450 vs. ExPASy TrEMBL
Match: A0A6J1GYF3 (uncharacterized protein LOC111458328 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111458328 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.0e-15
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 0 

Query: 24  KSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSF 83
           +S+  +  KR  HWIK  ++  +        LDVH KKIC+ +NQRS R VCSVFCT+SF
Sbjct: 54  RSIPFSGSKRPSHWIKQNLK-TQGATAAILPLDVHAKKICHSRNQRSTRSVCSVFCTESF 113

Query: 84  FPNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY 119
             NHRL         EE S SGQQG W++MHWGPY
Sbjct: 114 IRNHRL---------EEKSMSGQQGQWLKMHWGPY 138

[Close]
BLAST of CaUC05G105450 vs. ExPASy TrEMBL
Match: A0A6J1HJ99 (uncharacterized protein LOC111500016 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111500016 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-15
Identity = 48/95 (50.53%), Postives = 58/95 (61.05%), Query Frame = 0 

Query: 24  KSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSF 83
           +S+  +  KR  HWIK  ++  +        LDVH  KI +C+NQRS R VCSVFCTKSF
Sbjct: 54  RSIPFSGYKRPSHWIKQNLK-TQGATAAILPLDVHGTKISHCRNQRSTRSVCSVFCTKSF 113

Query: 84  FPNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY 119
             NHRL         EE S SGQQG W++MHWGPY
Sbjct: 114 IRNHRL---------EEKSMSGQQGQWLKMHWGPY 138

[Close]
BLAST of CaUC05G105450 vs. ExPASy TrEMBL
Match: A0A0A0KS70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598620 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.1e-07
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 54 QLDVHVKKICYCQNQRSLRPVCSVFCTKSFFPN 87
          QLDVHV+ ICYCQ QRSLRP+CSVFC+KSFF N
Sbjct: 64 QLDVHVEIICYCQKQRSLRPICSVFCSKSFFHN 96

[Close]
BLAST of CaUC05G105450 vs. ExPASy TrEMBL
Match: A0A6J1GX72 (uncharacterized protein LOC111458328 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111458328 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 0 

Query: 24  KSVHLTILKRQLHWIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSF 83
           +S+  +  KR  HWIK  ++  +        LDVH KKIC+ +NQRS R VCSVFCT+SF
Sbjct: 54  RSIPFSGSKRPSHWIKQNLK-TQGATAAILPLDVHAKKICHSRNQRSTRSVCSVFCTESF 113

Query: 84  FPNHRLNPIPE 95
             NHR +   E
Sbjct: 114 IRNHRSSTYQE 123

The following BLAST results are available for this feature:
BLAST of CaUC05G105450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956678.18.0e-2353.39uncharacterized protein LOC111458328 isoform X6 [Cucurbita moschata][more]
XP_022956675.12.1e-1550.53uncharacterized protein LOC111458328 isoform X3 [Cucurbita moschata][more]
XP_022965042.16.1e-1550.53uncharacterized protein LOC111500016 isoform X4 [Cucurbita maxima][more]
KAG7032311.14.4e-1351.69Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosp... [more]
KAG6601537.11.7e-1251.14hypothetical protein SDJN03_06770, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CaUC05G105450 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC05G105450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GXS73.9e-2353.39uncharacterized protein LOC111458328 isoform X6 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GYF31.0e-1550.53uncharacterized protein LOC111458328 isoform X3 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1HJ993.0e-1550.53uncharacterized protein LOC111500016 isoform X4 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A0A0KS705.1e-0781.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598620 PE=4 SV=1[more]
A0A6J1GX721.5e-0646.48uncharacterized protein LOC111458328 isoform X4 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of CaUC05G105450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G105450.1CaUC05G105450.1mRNA