CaUC05G103820 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G103820
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	transcription termination factor MTEF1, chloroplastic
Location	Ciama_Chr05: 34485992 .. 34488763 (+)
RNA-Seq Expression	CaUC05G103820
Synteny	CaUC05G103820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGGTTACAAATACATTGGTTTTCAACAACTTACTTATTTACCGAAAAGTTTGTTCTTTTTATATTTGACCTACTGTAACAACACGTGGAATCTAATGTATATGTTTCCAACACTCATACTCAATTTGACTTTAAACATCATTAAAATGTAGAGATTTTGAGTGGATGATAATTAAGGAAAAATAGGTGTGTGAGATTAAGCTTACATTTCCATTATAAGGAAAAAAAAAATGGTTTTTAAAATTTTACCTTATAGACTTTTATAAAAATAAATTAGAATACCACAAGGTTAAATACGTAATTATCTCATGAATAACAAATAATGAAATCATTTGAAAGATGTTAGGATTTGAAATCATGAAAAAGCATGTTTGTAACTCATGAAAATGGGATTTGTGAAACTGTATTTTAGGAGGGTTTGTTATCGGTACTTTGAAAAGGTTATTGAATTTCTTAAAGGGCCCAAGGCCACAAGCTAATTGGGCCCATGGGCTACATGTGAATCATATTAATGGGCCAACCCAACCCAGGTTCACACTGCGGGCTACTTCAAAAAGATGGGCTAACCAAACTGAAGCCCACTCTGTTTTTATTTTTACAATTTTGTAGCACAATTCTCGTAATTTAATTTAAAGTTTTGTTTCTCCGAGAATATGTTCATGTTGCACACTTACCTCAAACTTGGGTATATTTGAGTTAATTTTGCTATATTTGTAAATATTTTAGTTTTTTTTTCTGTATTTCAAAAGAGTCCTAAATCAAATTTGATATATTTATAAATAATTAAATTAATAATTAATTAACAATGAACTAATCGATTAAGTATGCATTTTTTTAAAACTATTTATTAAGTATGATTTAAATCATACTCTTAATCTATAGTTTTAATATGAATACAATTCATATTAATTTTTACCCTATAATTTAAAAATAATATTTGAATCTCATAAATTATATTTGAACAATACTTATCATAAGTATGGTTCAAAATGTCTCTCCCACATATATTTGAGGTTTTTGAGTTATTTCAAATGAGAAGCTTTGTTATATTATTTAGATTAATTTTGAGAGTTAGGTATAATGAGTTTGCTACTTTATTCCGTTTTTATATGTCAGTTTCTCCCACCAAAAAGTTTGATTTCCATCCATATATATCATTACTAATTGTTGTCTTCAGTTATGTTAGGCTTAGATTGACATTATGCAAATCTTCTTGTTTTTATTGTGAAAAAATACATTTTATAGTGTGATTAAAATATAAATTTTGGTCCAATTTCGTTTGTTTATCTTCTTCCTCCACTGGGAAAAAGCTTCGGTCTCTGAGATGATAATCCGACTCCAACTTCCTCCACCATGCTTCCTCTTCCTCTTTCCTCTGTCCTCAGTCCCATCTCTTAAGCCCTTGAGAAACCCTAATTTCAGAAAACCTCGGTTCGCCCTTTCTCTCAATACCCAATTTTCCGACCACTCCGACTCCGGCATCCTTTTCCGGGAGAAAATACTCTACCTCGAGAATCACCTTAATGTCGATTTCCGGAAAGCCTTCCGGGAGAATCCCCATTCTCGCTCCGCCACTCTCTCCACCCTCAAATCCGTTGAGGTTTGTCTCTCCTCCATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTTCTCGACATGTACCCCAAACTCCTCACCTCCAATCCAGACTATGATCTTTACCCCATCTTCGATTTCCTTCTTAATGAGGTTCAAATTCCGTTTCCCGACATTCGAAAATCCATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGTTGAAGTTCTTGCGTGACCTAGGTTTCGTTGGGTTGAACGCCATCACGTGCCAGACGACCATGCTACTGGTCTCGAGTGTTGAACATACACTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACGAGGATGTGGTTAATATGGTGTTAAGGTCTCCTGGGTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGAGTTATTTCTTAGGAGACATGAAGGGCGATTTGTTGGAATTGAAAAGTTTTCCGCAATATTTTTCGTTTAGTTTGGAGAGGAAGATTATGCCGCGTCATCGTTCGTTGGTTGAACATGGATTGTCACTTCCTTTGTCGAAAATGCTGAAGGTTAGTGACGGGGAGTTCACTGCAAGGTTGATAGAAATGCGATTGCAGTCCTTGACGGTTGATCGTTGAAGTGAGTTGCTTTGCTTCTTGTAGTTTTGTAGTTTCTTTGGATGCGTTTATTTAGGGACCTTATTTGTCTGTATATTCCGGCAAATCATTCCCTGTTTTTCCCTCCCTTGTGGGGTTGTGGGGTTTTCAACGTGTTAGAAAGTAATTTTAGAATCTTCAGTCGGTCGTTAAAACTGCAAGTGTTTTGCATGATTACGTGGTTCATATGCTAATTGTGAGTATGGAATTAAGATGTGAGTTTGGCAGGCAGGTCCTGGAAAATATATCATATGTTAGTTGTTGAAGATTATGACTTTGAACCAATGCATTAGTACTGTCGAAAATTATGAAAAATTATGAATAATAGCAAGTCCAACAACTGATGTGTGGCGTAGCTATTGAGTTAAAACTTTCAAGTGATATCAGTAACCTCTGCTCATTTGCTGCAGCCAGACTATACTCTCAGTTCCTTTCTATGTGGATCCTGGAAGGTGAACATTTGGTTGATTTCTATTTTGATTTTGGATTAAGGGATATCTGA

mRNA sequence

ATGTACGCTTCGGTCTCTGAGATGATAATCCGACTCCAACTTCCTCCACCATGCTTCCTCTTCCTCTTTCCTCTGTCCTCAGTCCCATCTCTTAAGCCCTTGAGAAACCCTAATTTCAGAAAACCTCGGTTCGCCCTTTCTCTCAATACCCAATTTTCCGACCACTCCGACTCCGGCATCCTTTTCCGGGAGAAAATACTCTACCTCGAGAATCACCTTAATGTCGATTTCCGGAAAGCCTTCCGGGAGAATCCCCATTCTCGCTCCGCCACTCTCTCCACCCTCAAATCCGTTGAGGTTTGTCTCTCCTCCATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTTCTCGACATGTACCCCAAACTCCTCACCTCCAATCCAGACTATGATCTTTACCCCATCTTCGATTTCCTTCTTAATGAGGTTCAAATTCCGTTTCCCGACATTCGAAAATCCATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGTTGAAGTTCTTGCGTGACCTAGGTTTCGTTGGGTTGAACGCCATCACGTGCCAGACGACCATGCTACTGGTCTCGAGTGTTGAACATACACTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACGAGGATGTGGTTAATATGGTGTTAAGGTCTCCTGGGTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGAGTTATTTCTTAGGAGACATGAAGGGCGATTTGTTGGAATTGAAAAGTTTTCCGCAATATTTTTCGTTTAGTTTGGAGAGGAAGATTATGCCGCGTCATCGTTCGTTGGTTGAACATGGATTGTCACTTCCTTTGTCGAAAATGCTGAAGGTTAGTGACGGGGAGTTCACTGCAAGGTTGATAGAAATGCGATTGCAGTCCTTGACGAATCTTCAGTCGGTCGTTAAAACTGCAAGTGTTTTGCATGATTACGTGGTTCATATGCTAATTGTGAGTATGGAATTAAGATGTGAGTTTGGCAGGCAGCAAGTCCAACAACTGATGTGTGGCGTAGCTATTGAGTTAAAACTTTCAAGTGATATCAGTAACCTCTGCTCATTTGCTGCAGCCAGACTATACTCTCAGTTCCTTTCTATGTGGATCCTGGAAGGTGAACATTTGGTTGATTTCTATTTTGATTTTGGATTAAGGGATATCTGA

Coding sequence (CDS)

ATGTACGCTTCGGTCTCTGAGATGATAATCCGACTCCAACTTCCTCCACCATGCTTCCTCTTCCTCTTTCCTCTGTCCTCAGTCCCATCTCTTAAGCCCTTGAGAAACCCTAATTTCAGAAAACCTCGGTTCGCCCTTTCTCTCAATACCCAATTTTCCGACCACTCCGACTCCGGCATCCTTTTCCGGGAGAAAATACTCTACCTCGAGAATCACCTTAATGTCGATTTCCGGAAAGCCTTCCGGGAGAATCCCCATTCTCGCTCCGCCACTCTCTCCACCCTCAAATCCGTTGAGGTTTGTCTCTCCTCCATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTTCTCGACATGTACCCCAAACTCCTCACCTCCAATCCAGACTATGATCTTTACCCCATCTTCGATTTCCTTCTTAATGAGGTTCAAATTCCGTTTCCCGACATTCGAAAATCCATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGTTGAAGTTCTTGCGTGACCTAGGTTTCGTTGGGTTGAACGCCATCACGTGCCAGACGACCATGCTACTGGTCTCGAGTGTTGAACATACACTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACGAGGATGTGGTTAATATGGTGTTAAGGTCTCCTGGGTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGAGTTATTTCTTAGGAGACATGAAGGGCGATTTGTTGGAATTGAAAAGTTTTCCGCAATATTTTTCGTTTAGTTTGGAGAGGAAGATTATGCCGCGTCATCGTTCGTTGGTTGAACATGGATTGTCACTTCCTTTGTCGAAAATGCTGAAGGTTAGTGACGGGGAGTTCACTGCAAGGTTGATAGAAATGCGATTGCAGTCCTTGACGAATCTTCAGTCGGTCGTTAAAACTGCAAGTGTTTTGCATGATTACGTGGTTCATATGCTAATTGTGAGTATGGAATTAAGATGTGAGTTTGGCAGGCAGCAAGTCCAACAACTGATGTGTGGCGTAGCTATTGAGTTAAAACTTTCAAGTGATATCAGTAACCTCTGCTCATTTGCTGCAGCCAGACTATACTCTCAGTTCCTTTCTATGTGGATCCTGGAAGGTGAACATTTGGTTGATTTCTATTTTGATTTTGGATTAAGGGATATCTGA

Protein sequence

MYASVSEMIIRLQLPPPCFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMRLQSLTNLQSVVKTASVLHDYVVHMLIVSMELRCEFGRQQVQQLMCGVAIELKLSSDISNLCSFAAARLYSQFLSMWILEGEHLVDFYFDFGLRDI

Homology

[Close]

BLAST of CaUC05G103820 vs. NCBI nr
Match: XP_038892906.1 (transcription termination factor MTEF1, chloroplastic [Benincasa hispida] >XP_038892907.1 transcription termination factor MTEF1, chloroplastic [Benincasa hispida])

HSP 1 Score: 549.3 bits (1414), Expect = 2.8e-152
Identity = 284/304 (93.42%), Postives = 291/304 (95.72%), Query Frame = 0


Query: 8   MIIRLQLPPPCFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKIL 67
           MI R QLPPPC  FLFP SS  +LKPLRNPNFRKPRFALSLNTQFSDHSD+G+LFREKIL
Sbjct: 1   MISRFQLPPPC--FLFPRSSFQALKPLRNPNFRKPRFALSLNTQFSDHSDAGLLFREKIL 60

Query: 68  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 127
           YLENHLNVDFRKAFRENP SRSATLST+KSVEVCLSSMGLELSAVGRVLDMYPKLLT+NP
Sbjct: 61  YLENHLNVDFRKAFRENPDSRSATLSTVKSVEVCLSSMGLELSAVGRVLDMYPKLLTANP 120

Query: 128 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 187
           DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 188 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLG 247
           CQTTMLLVSSVE TLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLV KV+YFL 
Sbjct: 181 CQTTMLLVSSVERTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVRKVNYFLE 240

Query: 248 DMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMRL 307
           DMKGDLLELK FPQYFSFSLERKI PRHRSLV+HGLSLPLSKMLKVSDGEFTARLIEMRL
Sbjct: 241 DMKGDLLELKIFPQYFSFSLERKIKPRHRSLVQHGLSLPLSKMLKVSDGEFTARLIEMRL 300

Query: 308 QSLT 312
           QSLT
Sbjct: 301 QSLT 302

[Close]

BLAST of CaUC05G103820 vs. NCBI nr
Match: XP_008446371.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] >KAA0034429.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK17705.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 525.4 bits (1352), Expect = 4.3e-145
Identity = 270/304 (88.82%), Postives = 283/304 (93.09%), Query Frame = 0


Query: 8   MIIRLQLPPP-CFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKI 67
           MI RLQLPPP CF+F FP S   SLKPL+NP+F KPRF LSLNTQFSD SDSG+LFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 68  LYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSN 127
           LYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMGL+ SAVGRVLDMYPKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 128 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAI 187
           PDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 188 TCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 247
           TCQTT+LLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 248 GDMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMR 307
           GDMKGDLLELKSFPQYFSF+LERKI PRHRSLVEHGLSLPLSKMLKVSDGEF A L EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 308 LQSL 311
            +SL
Sbjct: 301 CRSL 304

[Close]

BLAST of CaUC05G103820 vs. NCBI nr
Match: XP_022945324.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_022945325.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 523.9 bits (1348), Expect = 1.3e-144
Identity = 267/304 (87.83%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 8   MIIRLQLPPPCFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKIL 67
           M+ R+Q  PP  LFLFP SS PSL PLRNPNFRKPRF +SLN+QFSDHSD+G+LFR+KIL
Sbjct: 1   MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 68  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 127
           YLENHLNVDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 128 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 187
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 188 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLG 247
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 248 DMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMRL 307
           DMKGDL EL+ FPQYFSFSLERKI PRHR LVEHGLSL LSKMLKVSDGEFTARL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 308 QSLT 312
           QS T
Sbjct: 301 QSST 304

[Close]

BLAST of CaUC05G103820 vs. NCBI nr
Match: KAG7013135.1 (Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523.1 bits (1346), Expect = 2.1e-144
Identity = 267/304 (87.83%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 8   MIIRLQLPPPCFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKIL 67
           MI R+Q  PP  LFLFP SS PSL PLRNPNFRKPRF +SLN+QFSDHSD+G+LFR+KIL
Sbjct: 1   MISRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 68  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 127
           YLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 128 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 187
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 188 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLG 247
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 248 DMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMRL 307
           DMKGDL EL+ FPQYFSFSLERKI PRHR LVEHGLSL LSKMLKVSDGEFTARL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 308 QSLT 312
           QS T
Sbjct: 301 QSST 304

[Close]

BLAST of CaUC05G103820 vs. NCBI nr
Match: XP_022968085.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita maxima] >XP_022968086.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 521.5 bits (1342), Expect = 6.2e-144
Identity = 265/304 (87.17%), Postives = 283/304 (93.09%), Query Frame = 0


Query: 8   MIIRLQLPPPCFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKIL 67
           MI R+Q  PPC  FLFP SS PSL P+RNPNFRKPRF +SLN+QFSDHSD+G+ FR+KIL
Sbjct: 1   MISRVQNLPPCNRFLFPRSSTPSLNPMRNPNFRKPRFTISLNSQFSDHSDAGLHFRQKIL 60

Query: 68  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 127
           YLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 128 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 187
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 188 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLG 247
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 248 DMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMRL 307
           DMKGDL EL+ FPQYFSFSLERKI PRHR LVEHGLSL LSKMLKVSDGEFTARL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 308 QSLT 312
           QS T
Sbjct: 301 QSST 304

[Close]

BLAST of CaUC05G103820 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 306.2 bits (783), Expect = 5.4e-82
Identity = 162/273 (59.34%), Postives = 207/273 (75.82%), Query Frame = 0


Query: 39  FRKPRF-ALSLNTQFSDHSDSGILFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKS 98
           F  P F A+ +     + SD+GILFREK++YL++ LNVD  KA R NP  RSA +S++ S
Sbjct: 9   FPPPCFSAVRIRCFAGETSDTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVS 68

Query: 99  VEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCP 158
           VE  LSS GL   AVGR+LDM+P LLTS+P+ ++ P+  FL NE+ I   DI KSI RCP
Sbjct: 69  VETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCP 128

Query: 159 RILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSH 218
           R+L+S +D QLRPAL FL+ LGFVG + IT + T+LLVS+VE TL+PKI+YL E LG + 
Sbjct: 129 RLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTR 188

Query: 219 EDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKSFPQYFSFSLERKIMPRHR 278
           E+V  MV+RSP LLTYS+ NNLVPKV +F+ +M+GD+ ELK FPQYFSFSLERKI PRHR
Sbjct: 189 EEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHR 248

Query: 279 SLVEHGLSLPLSKMLKVSDGEFTARLIEMRLQS 310
            L EHG+ +PLS+MLKVSDG+F   L+E+RL+S
Sbjct: 249 LLKEHGILMPLSEMLKVSDGQFNHWLLELRLRS 280

[Close]

BLAST of CaUC05G103820 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-18
Identity = 60/209 (28.71%), Postives = 110/209 (52.63%), Query Frame = 0


Query: 76  DFRKAFRENPHSRSATL-STLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPI 135
           D ++     P     T+ + LK+    L  +G+  S +G+++   P L + + +  L P 
Sbjct: 235 DIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPT 294

Query: 136 FDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFL-RDLGFVGLNAITC--QTT 195
             +L+ EV I   D+ K +   P+ILV  LD+       FL ++LG    + +    +  
Sbjct: 295 IRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHP 354

Query: 196 MLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKG 255
            LL  S++   LP+I +L S+G+ + D++ ++     +L+ S+++NL PK  Y + ++  
Sbjct: 355 QLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNN 414

Query: 256 DLLELKSFPQYFSFSLERKIMPRHRSLVE 281
           ++  L  +P Y S SL+++I PRHR LVE
Sbjct: 415 EVHILTKYPMYLSLSLDQRIRPRHRFLVE 443

[Close]

BLAST of CaUC05G103820 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-16
Identity = 63/201 (31.34%), Postives = 103/201 (51.24%), Query Frame = 0


Query: 105 MGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDL 164
           +G+    + R+L + P L   + +  + P   F L E+ IP   I   +++ P +L + L
Sbjct: 398 LGIPKEGMKRILVVKPILYCIDLEKTIAPKVRF-LQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 165 DLQLRPALKFLRDLGFV---GLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVN 224
             ++RP + FL     V    +  +      LL  S+   L P ++Y  SLG+    +  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 225 MVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEH 284
           M+   P LL Y++ +NL PK  Y    M   L +L  FP++FS+SLER+I+PRH  +VE+
Sbjct: 518 MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVEN 577

Query: 285 GLSLPLSKMLKVSDGEFTARL 303
            ++  L  ML  +D EF  R+
Sbjct: 578 RVNFKLRYMLACTDEEFERRV 596

[Close]

BLAST of CaUC05G103820 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.5e-15
Identity = 60/228 (26.32%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 95  LKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSII 154
           LK     L ++G++ +   +++  +P +LT +    L    +F L++  +    I + + 
Sbjct: 268 LKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQ-KLTSTVEF-LSQTGLTEEQIGRILT 327

Query: 155 RCPRILVSDLDLQLRPALKFLRDLGF-VGLNAITCQTTMLLVSSVEHTLLPKIQYLESLG 214
           RCP I+   ++ +LRP +++ R L   V +    C  T  L  S+E  L P  ++    G
Sbjct: 328 RCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGL--SIESNLKPVTEFFLEKG 387

Query: 215 LSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKSFPQYFSFSLERKIMP 274
              +++  M+ R   L T+S++ N++PK  YF   M     EL  FPQ+F +SL+ +I P
Sbjct: 388 FGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKP 447

Query: 275 RHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMRLQSLTNLQSVVKTAS 322
           R+  +   G+ L L+++L +S  EF  ++++ ++  L +   + + +S
Sbjct: 448 RYELVQRSGVRLLLNQVLSLSGIEF-EKVVKKKMMKLVSNNVIAEQSS 489

[Close]

BLAST of CaUC05G103820 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.8e-06
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 135 FDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTM-- 194
           +D+L N V I    +   + RCP+IL   LD +L P ++ L  LG       +  T    
Sbjct: 45  WDYLSNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPP 104

Query: 195 LLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF--LG-DM 254
           +L  SVE  L P + + ++LG+    +  M+L +P L++YSI   L   VS+   LG D 
Sbjct: 105 ILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQ 164

Query: 255 KGDLLE-LKSFPQYFSFSLERKIMP 274
            G + + L   P    +S+++++ P
Sbjct: 165 DGMIGKVLVKNPFLMGYSVDKRLRP 189

[Close]

BLAST of CaUC05G103820 vs. ExPASy TrEMBL
Match: A0A5D3D1U5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00330 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 2.1e-145
Identity = 270/304 (88.82%), Postives = 283/304 (93.09%), Query Frame = 0


Query: 8   MIIRLQLPPP-CFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKI 67
           MI RLQLPPP CF+F FP S   SLKPL+NP+F KPRF LSLNTQFSD SDSG+LFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 68  LYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSN 127
           LYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMGL+ SAVGRVLDMYPKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 128 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAI 187
           PDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 188 TCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 247
           TCQTT+LLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 248 GDMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMR 307
           GDMKGDLLELKSFPQYFSF+LERKI PRHRSLVEHGLSLPLSKMLKVSDGEF A L EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 308 LQSL 311
            +SL
Sbjct: 301 CRSL 304

[Close]

BLAST of CaUC05G103820 vs. ExPASy TrEMBL
Match: A0A1S3BFK9 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489133 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 2.1e-145
Identity = 270/304 (88.82%), Postives = 283/304 (93.09%), Query Frame = 0


Query: 8   MIIRLQLPPP-CFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKI 67
           MI RLQLPPP CF+F FP S   SLKPL+NP+F KPRF LSLNTQFSD SDSG+LFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 68  LYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSN 127
           LYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMGL+ SAVGRVLDMYPKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 128 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAI 187
           PDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 188 TCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 247
           TCQTT+LLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 248 GDMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMR 307
           GDMKGDLLELKSFPQYFSF+LERKI PRHRSLVEHGLSLPLSKMLKVSDGEF A L EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 308 LQSL 311
            +SL
Sbjct: 301 CRSL 304

[Close]

BLAST of CaUC05G103820 vs. ExPASy TrEMBL
Match: A0A6J1G0M2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449597 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 6.1e-145
Identity = 267/304 (87.83%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 8   MIIRLQLPPPCFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKIL 67
           M+ R+Q  PP  LFLFP SS PSL PLRNPNFRKPRF +SLN+QFSDHSD+G+LFR+KIL
Sbjct: 1   MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 68  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 127
           YLENHLNVDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 128 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 187
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 188 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLG 247
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 248 DMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMRL 307
           DMKGDL EL+ FPQYFSFSLERKI PRHR LVEHGLSL LSKMLKVSDGEFTARL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 308 QSLT 312
           QS T
Sbjct: 301 QSST 304

[Close]

BLAST of CaUC05G103820 vs. ExPASy TrEMBL
Match: A0A6J1HTW2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467425 PE=3 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 3.0e-144
Identity = 265/304 (87.17%), Postives = 283/304 (93.09%), Query Frame = 0


Query: 8   MIIRLQLPPPCFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGILFREKIL 67
           MI R+Q  PPC  FLFP SS PSL P+RNPNFRKPRF +SLN+QFSDHSD+G+ FR+KIL
Sbjct: 1   MISRVQNLPPCNRFLFPRSSTPSLNPMRNPNFRKPRFTISLNSQFSDHSDAGLHFRQKIL 60

Query: 68  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 127
           YLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 128 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 187
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 188 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLG 247
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 248 DMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMRL 307
           DMKGDL EL+ FPQYFSFSLERKI PRHR LVEHGLSL LSKMLKVSDGEFTARL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 308 QSLT 312
           QS T
Sbjct: 301 QSST 304

[Close]

BLAST of CaUC05G103820 vs. ExPASy TrEMBL
Match: A0A6J1DAK3 (transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019187 PE=3 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 4.8e-142
Identity = 265/310 (85.48%), Postives = 281/310 (90.65%), Query Frame = 0


Query: 8   MIIRLQLPPPCFLFLFPLSSVPSLKPLRNPNFRKPRFALSLNTQFSDH------SDSGIL 67
           MI RLQ PPPC L LFP SS PSLKP  NPNFR PRF +++NTQFS H      SDSGIL
Sbjct: 1   MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGIL 60

Query: 68  FREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPK 127
           FREKILYLENHL+VD RKAF++NP SRSATLS LKSVEVCLSSMGLELSAVGRVLDMYP+
Sbjct: 61  FREKILYLENHLHVDSRKAFQQNPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQ 120

Query: 128 LLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFV 187
           LLTS+P+YDLYPIFDFLLNEV+IPFPDIRKSIIRCPRILVSDLDLQLRP L FLR+LGFV
Sbjct: 121 LLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFV 180

Query: 188 GLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPK 247
           GLNAITCQTTMLLVSS+EHTLLPKI+YLESLG SH+DVVNMVLRSPGLLTYSIQNNLVPK
Sbjct: 181 GLNAITCQTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPK 240

Query: 248 VSYFLGDMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTAR 307
           V YFLGDMKGDLLELK FPQYFSFSLERKI PRHR LVEHGLSL LS+MLKVSDGEFTAR
Sbjct: 241 VDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR 300

Query: 308 LIEMRLQSLT 312
           +IEMRLQS T
Sbjct: 301 VIEMRLQSAT 310

[Close]

BLAST of CaUC05G103820 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 306.2 bits (783), Expect = 3.8e-83
Identity = 162/273 (59.34%), Postives = 207/273 (75.82%), Query Frame = 0


Query: 39  FRKPRF-ALSLNTQFSDHSDSGILFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKS 98
           F  P F A+ +     + SD+GILFREK++YL++ LNVD  KA R NP  RSA +S++ S
Sbjct: 8   FPPPCFSAVRIRCFAGETSDTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVS 67

Query: 99  VEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCP 158
           VE  LSS GL   AVGR+LDM+P LLTS+P+ ++ P+  FL NE+ I   DI KSI RCP
Sbjct: 68  VETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCP 127

Query: 159 RILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSH 218
           R+L+S +D QLRPAL FL+ LGFVG + IT + T+LLVS+VE TL+PKI+YL E LG + 
Sbjct: 128 RLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTR 187

Query: 219 EDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKSFPQYFSFSLERKIMPRHR 278
           E+V  MV+RSP LLTYS+ NNLVPKV +F+ +M+GD+ ELK FPQYFSFSLERKI PRHR
Sbjct: 188 EEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHR 247

Query: 279 SLVEHGLSLPLSKMLKVSDGEFTARLIEMRLQS 310
            L EHG+ +PLS+MLKVSDG+F   L+E+RL+S
Sbjct: 248 LLKEHGILMPLSEMLKVSDGQFNHWLLELRLRS 279

[Close]

BLAST of CaUC05G103820 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 218.4 bits (555), Expect = 1.0e-56
Identity = 121/254 (47.64%), Postives = 168/254 (66.14%), Query Frame = 0


Query: 63  REKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKL 122
           +EKIL LE  + +D  KA   NP   SA L +++SV   L S G+  + + R+L M PK+
Sbjct: 56  KEKILCLE-LMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKI 115

Query: 123 LTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVG 182
           LTS+   +LYP+F FL N++ +P    R+ I +CPR+L+S ++ QL+PAL +L+ LG   
Sbjct: 116 LTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLKD 175

Query: 183 LNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV 242
           L A+  Q  +LLVSSVEHTL+PK+++LES+G S  + + M+LR P L T+SI+NN  PK+
Sbjct: 176 LEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPKL 235

Query: 243 SYFLGDMKGDLLELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEFTARL 302
            YF+ ++KG L  LK FPQYF+FSLE++I PRH   +E GL LPLS MLK +D EF    
Sbjct: 236 DYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFE--- 295

Query: 303 IEMRLQSLTNLQSV 317
                Q LTN  SV
Sbjct: 296 -----QLLTNPSSV 300

[Close]

BLAST of CaUC05G103820 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 146.4 bits (368), Expect = 5.1e-35
Identity = 100/284 (35.21%), Postives = 150/284 (52.82%), Query Frame = 0


Query: 23  FP-LSSVPSLKPLRNPNFRKPRF----ALSLNTQFSDHSDSGILFREKILYLENHLNVDF 82
           FP LS  P+     +  F+ P      + +  T  ++  +S I   EK++YL++ L +DF
Sbjct: 31  FPALSFKPNTSSSSSSFFKSPDIPSLSSTTTTTTTTETLESSI--HEKLIYLDS-LGIDF 90

Query: 83  RKAFRENPHSRSATLSTLKSVEVCLSS--MGLELSAVGRVLDMYPKLLTSNPDYDLYPIF 142
                 +P   S  LS ++SV   +++  +   L    R++ M P+LLTS       P+ 
Sbjct: 91  LTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVI 150

Query: 143 DFLLNEVQI-PFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLL 202
            FLL EV +    D+R+++ R PR+L   +D QLRP L FL+ +G +  +    + T LL
Sbjct: 151 TFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPH----KHTYLL 210

Query: 203 VSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLL 262
             SV++ L+P+I Y E LG S      M  R P L  YSI  N  PK+ Y + +M  D+ 
Sbjct: 211 SCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVR 270

Query: 263 ELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEF 299
           E+  FPQYFSFSLE +I PRH +    G+  PL  MLK ++  F
Sbjct: 271 EVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307

[Close]

BLAST of CaUC05G103820 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 146.4 bits (368), Expect = 5.1e-35
Identity = 100/284 (35.21%), Postives = 150/284 (52.82%), Query Frame = 0


Query: 23  FP-LSSVPSLKPLRNPNFRKPRF----ALSLNTQFSDHSDSGILFREKILYLENHLNVDF 82
           FP LS  P+     +  F+ P      + +  T  ++  +S I   EK++YL++ L +DF
Sbjct: 31  FPALSFKPNTSSSSSSFFKSPDIPSLSSTTTTTTTTETLESSI--HEKLIYLDS-LGIDF 90

Query: 83  RKAFRENPHSRSATLSTLKSVEVCLSS--MGLELSAVGRVLDMYPKLLTSNPDYDLYPIF 142
                 +P   S  LS ++SV   +++  +   L    R++ M P+LLTS       P+ 
Sbjct: 91  LTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVI 150

Query: 143 DFLLNEVQI-PFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLL 202
            FLL EV +    D+R+++ R PR+L   +D QLRP L FL+ +G +  +    + T LL
Sbjct: 151 TFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPH----KHTYLL 210

Query: 203 VSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLL 262
             SV++ L+P+I Y E LG S      M  R P L  YSI  N  PK+ Y + +M  D+ 
Sbjct: 211 SCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVR 270

Query: 263 ELKSFPQYFSFSLERKIMPRHRSLVEHGLSLPLSKMLKVSDGEF 299
           E+  FPQYFSFSLE +I PRH +    G+  PL  MLK ++  F
Sbjct: 271 EVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307

[Close]

BLAST of CaUC05G103820 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 130.2 bits (326), Expect = 3.8e-30
Identity = 77/211 (36.49%), Postives = 121/211 (57.35%), Query Frame = 0


Query: 92  LSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYD-LYPIFDFLLNEVQIPFPDIR 151
           LS + S    L S G+      R++ + P+L +   D   L P+FDFL  E+     + R
Sbjct: 62  LSVILSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESR 121

Query: 152 KSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLE 211
             I+ CP IL SD++  LRP L +L++LG   LN  +     +L + VE  L  K+++L+
Sbjct: 122 GLIVNCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVE-KLRAKMRFLK 181

Query: 212 SLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKSFPQYFSFSLERK 271
           S+G  HE+   +  R P +  YS+++NL PK  + + DM+ +L ELK FPQYF+FSL ++
Sbjct: 182 SIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKR 241

Query: 272 IMPRHRSLVEHGLSLPLSKMLKVSDGEFTAR 302
           I PRH  L +  + + LS+ML   D +F ++
Sbjct: 242 IRPRHWHLKKKNVRVSLSRMLMWGDQKFYSK 271

The following BLAST results are available for this feature:

BLAST of CaUC05G103820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892906.1	2.8e-152	93.42	transcription termination factor MTEF1, chloroplastic [Benincasa hispida] >XP_03...	[more]
XP_008446371.1	4.3e-145	88.82	PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] ...	[more]
XP_022945324.1	1.3e-144	87.83	transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_0...	[more]
KAG7013135.1	2.1e-144	87.83	Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma su...	[more]
XP_022968085.1	6.2e-144	87.17	transcription termination factor MTEF1, chloroplastic [Cucurbita maxima] >XP_022...	[more]

BLAST of CaUC05G103820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X53	5.4e-82	59.34	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9FM80	1.4e-18	28.71	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	2.3e-16	31.34	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	2.5e-15	26.32	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	4.8e-06	30.34	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of CaUC05G103820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1U5	2.1e-145	88.82	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BFK9	2.1e-145	88.82	transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1G0M2	6.1e-145	87.83	transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3...	[more]
A0A6J1HTW2	3.0e-144	87.17	transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366...	[more]
A0A6J1DAK3	4.8e-142	85.48	transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=...	[more]

BLAST of CaUC05G103820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03050.1	3.8e-83	59.34	Mitochondrial transcription termination factor family protein	[more]
AT2G34620.1	1.0e-56	47.64	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.1	5.1e-35	35.21	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.2	5.1e-35	35.21	Mitochondrial transcription termination factor family protein	[more]
AT3G18870.1	3.8e-30	36.49	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 150..181 e-value: 9.6E-4 score: 28.4 coord: 113..145 e-value: 25.0 score: 13.8 coord: 253..284 e-value: 0.002 score: 27.4 coord: 184..215 e-value: 0.54 score: 19.3 coord: 220..252 e-value: 0.038 score: 23.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 99..180 e-value: 3.0E-5 score: 23.1 coord: 146..298 e-value: 5.0E-29 score: 101.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 44..311
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 62..314 e-value: 6.4E-45 score: 155.3
None	No IPR available	PANTHER	PTHR13068:SF36	TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC	coord: 44..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G103820.1	CaUC05G103820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding