CaUC05G102890 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G102890
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr05: 33735575 .. 33738061 (+)
RNA-Seq ExpressionCaUC05G102890
SyntenyCaUC05G102890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGTTATGTTGTAGTTGGGGTAGATGCCCTGTGTTAAAAAAATAAAAAATAAAAAAAATAAAAATACTTGTAGTATTGGCCCTTGGGCCTTTATTTTCACTTTATATTATCCTTGGGCCTTTGAGTCAGGCCCATTTCCCTTTTTAGTACAAAAATTGCAAGGATGGAAGGTCGGACCTTAAAAGAGGGAGTGTATGTCAATTACAATTAAACTAAACTTATTTTGCTTATACTTGTTTTCTTTATAAATTTTATACTTGTTTCCTTGATAAATTTTGTTTCTTAAAGTTTTAAATATGTAGGTGTAAACCTAAAGTTTACATTATTTGCATGTAGGTCTCATCCAAGCCGCTTGTTCCCTGGCGGAGCTCCTTTGGTCCAAGGACTTTGTCCAAGCTAAGGTACAATAAAACTCACACCATTGTGATGCGAAGCTAGATACACTCTGATGCCTAAGTTAATCCATGAAGTGTTTAGTTCAACTAAGCACACAGAATATTGTTTGCCCTTTGAAGTGACGGAACAAAGTGTTTAGTTCAATTAAGCACACAAAATATTGCTTACCCTTTGAAGTGATGGAACAAGATTATTTATCCATTGTCCAATATTTGCTTGACACATGTGCAATATCGACTGTTTCCTATAGGTGCATCCTTGAACTTAAGCCCGCCTGTGGACTTGGCCTTGGACAATTCCCACCACTTTAGAAGTTCACCGAATGCAACGATTGAAGATCAAATTATGGACTTTGGGGTAGTTATAAATGTTTTGGCAAACAAATTATGTATTTACAGTTATACACACGAATTTTTAAATGATTTTTATGTGTTATAAAATTCAAATTGTGTACATATATTTCAACAGAATTTAAAATTGGAAATGCACTTTGGATTTGGGTTGGTTTACAGACTTTTCTTTTTGGTATTAGAACAATAAGGTGTAACTCGAGTAATTGATAATTTAGCATAAATGAGCCACTCAGAATGGTCTCAATTTCTAACCGAATTATTTATATCTGATATTTTATTTTGACCACTCCATTAACCTTTAATTTTCAGGTCAAGTTTGTGTTAGGCCCAAGTTAGGCTTCAACTAACCTCTGAGATTTCACCATATGTAAATGAAAAAGTTGAGTGTTTTTTTTCCTCCAACACTCAATGACCTCCCCCCACAAGAAATATTAATCTTCACACATGAATTTCTAAATTTGTGCACCACAGAATTGCAAAATTTATAGTTGCTATCAATGTAAATGTCACTTAATAAAAGAACTCCCAAACCCAAAAAAAATGTATTGGTTAGATTAATAACACAGTTTCTCTGCAGTAGTATGATTTATGTATGAACAATAATGGAATCTATTGAGCATGAATTGGGGGATTGTTCATCTATACTTGCATTTACATGAAGGTGCTCTTGTAATCAACCTGGGTTCCAGTCAGCATGGAAAAAAGCCTTCCTGGTCAAGGTGATATTTCTCTTCTCTATTATATCTACAAAATCTCCTATTCAATCAGGCATTTGAGCTACCTTGGCTATAAAAGTCTGAACTGTAATCTTGGTTACCGAAGGCCAGCATTCGGAAAAATCTAATTTCAGCAGATTGTTGACCGGAGTCGAAAGCTTGACTCTCCCCGAATCTCATTCCATTACTTAAATCTGCTGTGGCTAAGCTATCAAAAGCTCTAACAACCTGAGAATGAGAAAATGAGAAGAACAATTTTGTTACAATACTGCAAAAGATGCAACAATTGTGAGTTTTGGGTTTTCCCTATTACGAATCAGTAACAGAAACACAACCTGTCCCATCTGCGGTCTCTTGGCAGACGCGTGCCGCACGCAAGCAGCAGCTATTCCTATCATCCCCAACATTTCACTCTCGACGTAGTTCCTTTCAAGCCTTGGGTCCACCAATTTTTCGAAATCTTGGCTGTCGAGTGCATGGTTTAGTAAAGGCCGAGCCTGAAAGAGGAGAACATTGTCAGGAAAGGTTGATTTGGGACTTTGAAAATCTCCATTTTCTGGCATTGGTAAATGTTTTAGCTGTCACTTATCCCATAACTGTTTGGACAATTTGATGCAGGAACTATATAAATCATTCCAGAACATTTGAGTTAAGTGTGTGTTATTTGTACTTCTCATTTCATAACATTTCTTCAATTTTATAGATATATTATATGTGGATAATTTTTTTTCCAAATGAAATTTTAGTTGCTAATGTTAAAATAACATTTTTCTCATACATTGCAGAATTATAGTGAGGACATTCATGCTTCATACGATACTTGTGGCTACAGAGGTTCTTAGAAAATTCAAACAAATGATCAGTCAAATAACAAAATCATGAAAAGGTCAGTGGCATCATCGTATCATATCCATATCAGTGAAAACCTACAAGAGAAGTAGCATGGATAGATTACCCATTCGACAAGGCTCTCATTCCCCATTGGTTGGGATGCGTCCACAGCCTTTCGACCAGTAA

mRNA sequence

ATGGAGATAACAGAAACACAACCTGTCCCATCTGCGGTCTCTTGGCAGACGCGTGCCGCACGCAAGCAGCAGCTATTCCTATCATCCCCAACATTTCACTCTCGACGTAGTTCCTTTCAAGCCTTGGGTCCACCAATTTTTCGAAATCTTGGCTGTCGAGTGCATGGTTTAGTAAAGGCCGAGCCTGAAAGAGGAGAACATTGTCAGGAAAGGTTGATTTGGGACTTTGAAAATCTCCATTTTCTGGCATTGAATTATAGTGAGGACATTCATGCTTCATACGATACTTGTGGCTACAGAGGTCAGTGGCATCATCGTATCATATCCATATCAGTGAAAACCTACAAGAGAAGTAGCATGGATAGATTACCCATTCGACAAGGCTCTCATTCCCCATTGGTTGGGATGCGTCCACAGCCTTTCGACCAGTAA

Coding sequence (CDS)

ATGGAGATAACAGAAACACAACCTGTCCCATCTGCGGTCTCTTGGCAGACGCGTGCCGCACGCAAGCAGCAGCTATTCCTATCATCCCCAACATTTCACTCTCGACGTAGTTCCTTTCAAGCCTTGGGTCCACCAATTTTTCGAAATCTTGGCTGTCGAGTGCATGGTTTAGTAAAGGCCGAGCCTGAAAGAGGAGAACATTGTCAGGAAAGGTTGATTTGGGACTTTGAAAATCTCCATTTTCTGGCATTGAATTATAGTGAGGACATTCATGCTTCATACGATACTTGTGGCTACAGAGGTCAGTGGCATCATCGTATCATATCCATATCAGTGAAAACCTACAAGAGAAGTAGCATGGATAGATTACCCATTCGACAAGGCTCTCATTCCCCATTGGTTGGGATGCGTCCACAGCCTTTCGACCAGTAA

Protein sequence

MEITETQPVPSAVSWQTRAARKQQLFLSSPTFHSRRSSFQALGPPIFRNLGCRVHGLVKAEPERGEHCQERLIWDFENLHFLALNYSEDIHASYDTCGYRGQWHHRIISISVKTYKRSSMDRLPIRQGSHSPLVGMRPQPFDQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G102890.1CaUC05G102890.1mRNA