CaUC05G102840 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G102840
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	DNL-type domain-containing protein
Location	Ciama_Chr05: 33689982 .. 33692673 (+)
RNA-Seq Expression	CaUC05G102840
Synteny	CaUC05G102840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCAACTCTTTCGAGACTCGGCCGCTTCCATCCATCAACTCATTCAAACCTATAGTCTTCTTTTCGAAAGCAAACCCTAGCGATGGTGTCTTCATTAGGTGAATAATCAATTATTCTTTTCGTTATCTTCAATTTGAGACTTCTTTATTATTCCTTTCATCTATTTACACGAGAAAATTGAGCGTTTCTTTTCCAGAAGTAGAAACTTCTATACAGCACCAGTTCTTCGGGAACGCAGATATAAGGTGCTTGCGGTTTCTAGATTGGTGGATGGTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATATGGTATGAGTTCGGTAATGAATCTTGAACTGAGCTAGAGATTCTTGAACTTATGGCTTGTGTTTATCTTTCTTCAATTTGCAGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACTTGTAACCTATGTAGTGAGAGGACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGGTACACCATTATATATGGATGTTCTAATGTGTTGCAAAATCTCAATGCTACTATCGATTTTGGAGTTCTATCAAAGCATTTGATATGATGAACCATTTTGCATTAGCAGTTCTAGTAAGCTAATCATTGTTCTTTCTTTCGCTTCAAACGAATGTGTGGATTTGTTCTGACTGAAATTGTTGCAATACTATGTAATTATACTCTGAAACCCCAAGCTTCTGCAAACTTTTTTCGAGTTTAAGTATACACCATTCTTTTTTATTGGACTGCTGTAAGTTGAAACCCCAATTTCTACAACTCGTGAAGGATGGATAGTTGATTGTGCGTGGTTTTTTTATTTTTTATTTTTTATTTTTTCCTTCCTTTTTGCTACAATTCAAAAACATTCTTAGAAGGTTAGTATTCATATTTCTACTTGTATGTCTAGAATTTGAGGGAAGATATTTCCTGCTTGTCTCTTGCCCTCTCTGGCTCTCTTTGAATTCTCTCTAATAATAATTAAGTATTCCTAAAAATTACTCAATGTTGATTTGATTGATTAGGATGTCTAACAAAGGTCCAAGAAAAAGATTCAGCATGGAAATATGCACACATGGAAAATTTTCACGACATATTTACTTGTGTTTGCAATTTTTGTTCCAAAAGAACAAAAAGAGTACTATATAGAGTGAAGCACCATCTTTCTGGTGGTTATAGAAATGAAACTACTTGCAAAAAATGTCCAAATCATATCAATGAAGAAATTAGAGAAAATATTTGTCTAGGAGAAAGGAACTGAATGTTCAAAGAAGTTGGAGATGTAGGACTCACTTTTGATGAGGAAGATGATGATTTGGAGGTAAATTGTCTAAGGAAGAGGTGGTCATCAAGTCGAAGCCATAAAAAAGATTGTTTAGGATCGGGTTAAATCTTCTAGGAAGAAGCCAAAGAGTTCAAAAAAATGCACGGTCAATAGTGAATGATGCATATAAAAAAGAAATGATCGCATGTCTAAATATTGCAAGATGGTTTTATGATGCTAGAATACCTTTTAATGCTTGCAAGTATGATAGCTTTGGTCCCATGGTTGACGCCATAGGTACTAAATAGACTAAATTTCATGTTAGCAACGTCTAGTCAATTAAAAATTTTAAAAAGGCATAAATATATATTGAAGCCGACATGAGCATAGCTTAATTGGCATGATCTTGTATATTAAACTTTGAGGTTTGAGATTCGATTCTTCCACCCCACATATGGTCAAGAAAAAAGAAAAAAGAAAAAATAATTGTTTATTGCAATTCTCCATGACCTTTTGAACCTCTTAATCCTTTCGATAGTGATATGGTTGTTTTATAGTAGTGAATGCTGTTTACTGTTTCTTAATTTGGGTGGTGTTATGCTTCCAAGTAATATTCTGTACAGTGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGATAATCTTGGCCTTATAGTTGAGTATGACTTCCGGGAGGAGGACATGGATGTGGACTCAAATTCAGATCAAGTTTGATGTGGTTCAACGATGACATTTCCCTTTACTACTTTCACTTTGAATCGGCCCCACAACTTTCTTGAAAATTCATGAAGGCCGATTCACTCTTCTTTTTTCCTTAATCCCATCGATTCCTTCAGGGACAGATACATCACAGTTTGGCAGGCAAAATGGATTGCTGTTTTAGCATTTGATCGACATGCTTAGACGTGGGGTAAAGGTAGGCTTATATCTGCAGCTAGTCATGTTGATGTATAACTTTGACAATCATATGCTTCAAAGAACTGATATTGATTATTAAAAAATTCAGGTTGTAGTTAGCAAGGAGTGATCGGGTTTACTGTGAATTTGAACGTAGCTCAAGGTTCTTGAAGCTCTAAAAAAAAGAACAATCGATTTACTACTTGCTCGCTTATTGTTAGATACAAATCAACATATGCACTCTGTTCATCTCATTCCATTACAAACAGAACAATATGTGGAAAATGTCATGCATCTTAGTAATAAATTTTGATGGATGATGCGTAATGGCTAGAGGTGGAGTGTTTTCTTTCTTTTGCTTCTTTCTTCTCCTTAACTGAAAGAATTGTTGCATTACATCAGCACATTCCGAT

mRNA sequence

ATGGCCGCGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCAACTCTTTCGAGACTCGGCCGCTTCCATCCATCAACTCATTCAAACCTATAGTCTTCTTTTCGAAAGCAAACCCTAGCGATGGTGTCTTCATTAGAAGTAGAAACTTCTATACAGCACCAGTTCTTCGGGAACGCAGATATAAGGTGCTTGCGGTTTCTAGATTGGTGGATGGTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATATGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACTTGTAACCTATGTAGTGAGAGGACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGATAATCTTGGCCTTATAGTTGAGTATGACTTCCGGGAGGAGGACATGGATGTGGACTCAAATTCAGATCAAGTTTGATGTGGTTCAACGATGACATTTCCCTTTACTACTTTCACTTTGAATCGGCCCCACAACTTTCTTGAAAATTCATGAAGGCCGATTCACTCTTCTTTTTTCCTTAATCCCATCGATTCCTTCAGGGACAGATACATCACAGTTTGGCAGGCAAAATGGATTGCTGTTTTAGCATTTGATCGACATGCTTAGACGTGGGGTAAAGGTTGTAGTTAGCAAGGAGTGATCGGGTTTACTGTGAATTTGAACGTAGCTCAAGGTTCTTGAAGCTCTAAAAAAAAGAACAATCGATTTACTACTTGCTCGCTTATTGTTAGATACAAATCAACATATGCACTCTGTTCATCTCATTCCATTACAAACAGAACAATATGTGGAAAATGTCATGCATCTTAGTAATAAATTTTGATGGATGATGCGTAATGGCTAGAGGTGGAGTGTTTTCTTTCTTTTGCTTCTTTCTTCTCCTTAACTGAAAGAATTGTTGCATTACATCAGCACATTCCGAT

Coding sequence (CDS)

ATGGCCGCGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCAACTCTTTCGAGACTCGGCCGCTTCCATCCATCAACTCATTCAAACCTATAGTCTTCTTTTCGAAAGCAAACCCTAGCGATGGTGTCTTCATTAGAAGTAGAAACTTCTATACAGCACCAGTTCTTCGGGAACGCAGATATAAGGTGCTTGCGGTTTCTAGATTGGTGGATGGTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATATGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACTTGTAACCTATGTAGTGAGAGGACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGATAATCTTGGCCTTATAGTTGAGTATGACTTCCGGGAGGAGGACATGGATGTGGACTCAAATTCAGATCAAGTTTGA

Protein sequence

MAAAKTVFFSSPALLHQSNSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

Homology

[Close]

BLAST of CaUC05G102840 vs. NCBI nr
Match: XP_038891803.1 (uncharacterized protein C24H6.02c [Benincasa hispida])

HSP 1 Score: 298.5 bits (763), Expect = 3.6e-77
Identity = 154/171 (90.06%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAAKTV+FSSPALLH S NS ETRPL SINSFK I+ FSKANPS+GVFIRSRNF T PV
Sbjct: 1   MAAAKTVYFSSPALLHHSFNSSETRPLSSINSFKSIL-FSKANPSNGVFIRSRNFRTVPV 60

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            RERRYKVL VSRLVDGYPGDDDESAQRNSD  AAIDIKLPRRSLMVTFTCN CSERTKR
Sbjct: 61  TRERRYKVLTVSRLVDGYPGDDDESAQRNSDTAAAIDIKLPRRSLMVTFTCNQCSERTKR 120

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMD+DSNSDQV
Sbjct: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDMDSNSDQV 170

[Close]

BLAST of CaUC05G102840 vs. NCBI nr
Match: XP_008446529.1 (PREDICTED: uncharacterized protein C24H6.02c isoform X1 [Cucumis melo] >KAA0034513.1 mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo var. makuwa] >TYK09067.1 mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 7.8e-72
Identity = 146/171 (85.38%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPS+GVFIRSRNF TAPV
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPIL-SSKANPSNGVFIRSRNFCTAPV 60

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            R RRYKVL VS LVDGY GDDDES+QRNSD GAAIDIKLPRRSLMVTFTCN CSERTKR
Sbjct: 61  TRGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKR 120

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Sbjct: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of CaUC05G102840 vs. NCBI nr
Match: XP_004135125.1 (uncharacterized protein C24H6.02c isoform X3 [Cucumis sativus] >KGN52030.1 hypothetical protein Csa_008252 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 3.9e-71
Identity = 145/171 (84.80%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAA TV FSSP LL H  N  +TRP PSI SFKPIV  SKANPS+GVFIRSRNF TAPV
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIV-SSKANPSNGVFIRSRNFCTAPV 63

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            RERRYKVL VS LVDGY GDDDE +QRNSD GAAIDIKLPRRSLMVTFTCN CSERTKR
Sbjct: 64  SRERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKR 123

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED+D+DS+SDQV
Sbjct: 124 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDVDLDSSSDQV 173

[Close]

BLAST of CaUC05G102840 vs. NCBI nr
Match: XP_016900245.1 (PREDICTED: mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 2.8e-69
Identity = 144/171 (84.21%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPS+GVFI  RNF TAPV
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPIL-SSKANPSNGVFI--RNFCTAPV 60

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            R RRYKVL VS LVDGY GDDDES+QRNSD GAAIDIKLPRRSLMVTFTCN CSERTKR
Sbjct: 61  TRGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKR 120

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Sbjct: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 168

[Close]

BLAST of CaUC05G102840 vs. NCBI nr
Match: KAG7032119.1 (DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 140/171 (81.87%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAAKT+ FSSPALL QS N  +TRP PSIN+F+PIV  SKANPS+G FIRSR F TAPV
Sbjct: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSINAFRPIV-SSKANPSNGFFIRSRCFRTAPV 60

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            RE R KVL VSRLVDG  GDDDESAQRNSD GAAIDIKLPRRSL+VTFTCN C +RTKR
Sbjct: 61  TRENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKR 120

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D+DV+SNSDQV
Sbjct: 121 LINRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 170

[Close]

BLAST of CaUC05G102840 vs. ExPASy Swiss-Prot
Match: Q0IH40 (DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-07
Identity = 20/58 (34.48%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 100 PRRSLMVTFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFR 158
           P     + +TC +C+ R+ + I+++AY +G+V V+C GC+ +H + DNLG   + + R
Sbjct: 78  PSSHYRLIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLEGR 135

[Close]

BLAST of CaUC05G102840 vs. ExPASy Swiss-Prot
Match: Q5SXM8 (DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.2e-07
Identity = 20/44 (45.45%), Postives = 31/44 (70.45%), Query Frame = 0


Query: 106 VTFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLG 150
           + +TC +C  R+ + I++LAY +G+V V C GCQ +H + DNLG
Sbjct: 71  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLG 114

[Close]

BLAST of CaUC05G102840 vs. ExPASy Swiss-Prot
Match: A1L1P7 (DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.5e-06
Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 106 VTFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNL 149
           + +TC +CS R+ + I++LAY +G+V V C GC+ +H + DNL
Sbjct: 83  LVYTCKVCSTRSMKKISKLAYHKGVVIVTCPGCKNHHVIADNL 125

[Close]

BLAST of CaUC05G102840 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.5e-06
Identity = 19/43 (44.19%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 106 VTFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNL 149
           + +TC +C  R+ + I++LAY +G+V V C GCQ +H + DNL
Sbjct: 75  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNL 117

[Close]

BLAST of CaUC05G102840 vs. ExPASy TrEMBL
Match: A0A5A7SVJ1 (Mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00560 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.8e-72
Identity = 146/171 (85.38%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPS+GVFIRSRNF TAPV
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPIL-SSKANPSNGVFIRSRNFCTAPV 60

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            R RRYKVL VS LVDGY GDDDES+QRNSD GAAIDIKLPRRSLMVTFTCN CSERTKR
Sbjct: 61  TRGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKR 120

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Sbjct: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of CaUC05G102840 vs. ExPASy TrEMBL
Match: A0A1S3BG31 (uncharacterized protein C24H6.02c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489232 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.8e-72
Identity = 146/171 (85.38%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPS+GVFIRSRNF TAPV
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPIL-SSKANPSNGVFIRSRNFCTAPV 60

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            R RRYKVL VS LVDGY GDDDES+QRNSD GAAIDIKLPRRSLMVTFTCN CSERTKR
Sbjct: 61  TRGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKR 120

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Sbjct: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of CaUC05G102840 vs. ExPASy TrEMBL
Match: A0A0A0KR03 (DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608180 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.9e-71
Identity = 145/171 (84.80%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAA TV FSSP LL H  N  +TRP PSI SFKPIV  SKANPS+GVFIRSRNF TAPV
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIV-SSKANPSNGVFIRSRNFCTAPV 63

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            RERRYKVL VS LVDGY GDDDE +QRNSD GAAIDIKLPRRSLMVTFTCN CSERTKR
Sbjct: 64  SRERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKR 123

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED+D+DS+SDQV
Sbjct: 124 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDVDLDSSSDQV 173

[Close]

BLAST of CaUC05G102840 vs. ExPASy TrEMBL
Match: A0A1S4DWZ3 (mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489232 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 144/171 (84.21%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPS+GVFI  RNF TAPV
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPIL-SSKANPSNGVFI--RNFCTAPV 60

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
            R RRYKVL VS LVDGY GDDDES+QRNSD GAAIDIKLPRRSLMVTFTCN CSERTKR
Sbjct: 61  TRGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKR 120

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Sbjct: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 168

[Close]

BLAST of CaUC05G102840 vs. ExPASy TrEMBL
Match: A0A6J1D799 (uncharacterized protein LOC111017577 OS=Momordica charantia OX=3673 GN=LOC111017577 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 135/171 (78.95%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPV 60
           M AAKT+F SSPALL H  NS +  P PSI +F+PI+  SKANPS+ VFIRSRNF+TAPV
Sbjct: 1   MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPII-SSKANPSNDVFIRSRNFHTAPV 60

Query: 61  LRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKR 120
           +RERRYKV AVSRLVDG  G+D++SA+RNSDMGAAIDIK PRRSL+V FTCN C+ RTKR
Sbjct: 61  IRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKFPRRSLLVEFTCNQCNGRTKR 120

Query: 121 LINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV 171
           +INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF+EEDMDVDSNSDQV
Sbjct: 121 IINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFQEEDMDVDSNSDQV 170

[Close]

BLAST of CaUC05G102840 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 75/157 (47.77%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 10  SSPALLHQSNSFETRPLPSINSFKPIVFFSKANPSDGVFIRSRNFYTAPVLRERRYKVLA 69
           + P   H S SF   P P      PI    ++  +  + +        P  R R + V  
Sbjct: 21  TKPINFHFSASFYKPPRPFYKQQNPISALHRSKTTRVIEV------VTPKQRNRSFSVF- 80

Query: 70  VSRLVDGYPGDDDESAQRNSDMGAAIDIKLPRRSLMVTFTCNLCSERTKRLINRLAYERG 129
              L D    + DE +  ++++ A+IDIKLPRRSL V FTCN C ERTKRLINR AYE+G
Sbjct: 81  -GSLADDSKLNPDEESNDSAEV-ASIDIKLPRRSLQVEFTCNSCGERTKRLINRHAYEKG 140

Query: 130 LVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSN 167
           LVFVQCAGC K+HKLVDNLGLIVEYDFRE   D+ ++
Sbjct: 141 LVFVQCAGCLKHHKLVDNLGLIVEYDFRETSKDLGTD 168

[Close]

BLAST of CaUC05G102840 vs. TAIR 10
Match: AT5G27280.1 (Zim17-type zinc finger protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.1e-14
Identity = 34/59 (57.63%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 98  KLPRRSLMVTFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF 157
           K PRR + V FTCN+C +RT R IN  AY  G VFVQC GC  +HKLVDNL L  E  +
Sbjct: 115 KSPRRRMRVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNLFHEVKY 173

[Close]

BLAST of CaUC05G102840 vs. TAIR 10
Match: AT3G54826.1 (Zim17-type zinc finger protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 20/50 (40.00%), Postives = 30/50 (60.00%), Query Frame = 0


Query: 100 PRRSLMVTFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLG 150
           PR   M+ FTC +C  R+ ++ +R +YE G+V V+C GC   H + D  G
Sbjct: 132 PRHDFMMVFTCKVCDTRSMKMASRESYENGVVVVRCGGCDNLHLIADRRG 181

The following BLAST results are available for this feature:

BLAST of CaUC05G102840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891803.1	3.6e-77	90.06	uncharacterized protein C24H6.02c [Benincasa hispida]	[more]
XP_008446529.1	7.8e-72	85.38	PREDICTED: uncharacterized protein C24H6.02c isoform X1 [Cucumis melo] >KAA00345...	[more]
XP_004135125.1	3.9e-71	84.80	uncharacterized protein C24H6.02c isoform X3 [Cucumis sativus] >KGN52030.1 hypot...	[more]
XP_016900245.1	2.8e-69	84.21	PREDICTED: mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo]	[more]
KAG7032119.1	1.2e-67	81.87	DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CaUC05G102840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IH40	7.0e-07	34.48	DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1	[more]
Q5SXM8	9.2e-07	45.45	DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1	[more]
A1L1P7	3.5e-06	44.19	DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1	[more]
Q9D113	4.5e-06	44.19	DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1	[more]

BLAST of CaUC05G102840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVJ1	3.8e-72	85.38	Mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S3BG31	3.8e-72	85.38	uncharacterized protein C24H6.02c isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A0A0KR03	1.9e-71	84.80	DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608180 PE...	[more]
A0A1S4DWZ3	1.3e-69	84.21	mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1D799	1.3e-67	78.95	uncharacterized protein LOC111017577 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of CaUC05G102840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68730.1	1.2e-30	47.77	Zim17-type zinc finger protein	[more]
AT5G27280.1	6.1e-14	57.63	Zim17-type zinc finger protein	[more]
AT3G54826.1	1.1e-07	40.00	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 106..153 e-value: 1.2E-16 score: 60.4
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 99..170 score: 15.108959
None	No IPR available	PANTHER	PTHR20922:SF19	F24J5.3	coord: 3..168
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 3..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G102840.1	CaUC05G102840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0008270	zinc ion binding