CaUC05G099270 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G099270
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	polyadenylate-binding protein RBP47-like
Location	Ciama_Chr05: 30349742 .. 30362553 (-)
RNA-Seq Expression	CaUC05G099270
Synteny	CaUC05G099270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACCTTCCGGTTTGTCGTCATCCTCAAAACTCCAAAATAAATCCTCAGGCTTAGACCCTAATCCTCTCCTCTATTCACTTCCCCTTTCGCTAAACTCTTCAGATTCCGATTCTTTTTTCTCTTCTTCCTCTCCTTCAATTCAGATTCTTTTTCCCTTTTGGGTTAGGCTGTACATTAAAATCTGCTTCATTCATTCTTTTGTTTCTTTGTTTGTTTGTTTGTTTGTTTTTCCACTGTTAATACGGTCGAAGATAAGATGCAGAGCAACGGTTCTGATTCGCAGCCGCATGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCATCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGGTTTAGTTTTCTCTCCCTCTACATTACTAGTCTAACAAGTCGTTTCGATGAATTAATGATATGATTATTTGCTGACTTGCTGGAATTTTAATTGTTATAGTTCCCAATTAAATCATTCTTTTTGATTAAGCGGTAAATTCTATTCGTTAAATTAAGGGTCTAAATTCTATTCGTTAAATTACTGGAATTTAACAAATCTCAATGAGGAAGTATTGGTAACTGGTATGTGGTAAAGCAACATGGAGGTATGTTTTAAGACTTTATTAGTCCTGTTTAGAATTACTGTATCTTCTAACCTCTCCAAATCACTGCCTATTGAATATTGTGGAAAGGATACGAAGAAATATTTTATTAGACTATGCTATTAATAAATGGAAGATTACATTCTGTAGAGATAAAGAATGTGTAGATTCTATAGTAATGGGAAGATTGCATTATGTCAATTACTAGAGAATGTGTAGCATTTTATTTGAAAAATGTCAATGTCAATTACATTCTCTAGTAAATGGAAGATTACATTCTCTTGCAGTTCAGCTTTAGCGTTCTCTTAGAATCTTTTTTAGTCGAAAAATCTTGAATTGTTCTTAGGTTCGCATGGTCATGTTGAACATTGATTGTTCTATTTTCTGTACGATGCAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACGTTTAGCACCAGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGGTACATTTTAAATTTAGGGTTTAGTGTGCTTAAGCTTAGCCTAAAACTACTTCCAAGGAGTAGGATTAGTCTTTGGGGAGGGTGTGCAATTCTGGAATAAATGAAAGTATGAAAATTCTCTCTCCCCAGACATTTGGTTCAAGACATGGGGATATGTATCAAAAAAGGGTTATGAAAATGATAACCATAATTGTTCTCCTTAGAAATTTTGTAGCAGTTAATGTTTTTATGTCAAGACATCATGTTAGACAACAGAACACAAAAGCTATCCATTTATGTTGACTTACTTTTTGTAGATGTTTAGTAATTCAGACTGAAGTGGTTCATATGCTTAAACAGGGGTTACTTCCTCCTTATAATTCAGGCTGAAGATAGTATCTATTTGTTATATCTTTCGTTTTTCAGGCGTCCAGTAATGCTACGTGTTTATTTAAGTGATTTTCTTTTTTGGTTACTTTTATCAATAAGATAGGCCATCCAGGGTAAACTTGTGTTGGTAAGTTTTGAATTGAGGCCATTTTAGTGGCATTTTCCTTTGACAACTTTAATAGAGTAATCATATGAAAATTCTGTGTGAATCCTCGAGCAAAAGTAGTTCTGAAATAGCATCCCCAAAGAATTGAAATTTTTGAAATCATTGTCAGTCTGCATACGACACGAGATTAGACAATTTTAAGGATTTTATTCTGTGAATGCCTGTTTTCTTAGGGTTCACTCAAGGTTGTACAGTTCCATACCCCATTTGGACTGCTTATATATATGTTTGTGTCAGTCCGCAAACGACACAAAATGAGACAATTTTAAGGATTTTATTTTTTGAATGCCTGTTTTCTTAGGGTTCACTCAAGGTTGTACACTTCCATACCCCATTTGGACTGCTTATATATATATTGGCCTGTGGTTTTTATAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGCCTCCAATCTGAAGGAGATTCTGCGAATACAACTGTGAGTTGCTTCTGTTATTTTGTTTGTATCGCTAGGATTGCACCTCGTATTCTTGGGTTAATCTGAGCTTTCCTTTTAGATATTTGTTGGAGGGCTGGATCCTAATGTCACCGATGAAGATCTGCGACAACCTTTCTTGCAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTCCAATTTGCCAACAGGTAAAATTTCTGTAATTAGGTTTTCTTTTCTTATCATATGAACAATGAAATAGTAGTATCTATCTGATAATTGGTTTTGTTTATTTACTGAGTCACTAATTTATGTCACATATTCTTCTCAAATTTCCTTTGCAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGGCAAATTACCCTTCTCTCCTACTGTGGAAATGATAACAATATATATACACACATATATATATTCATCACTCTCTCAATTTCCATGACTTTTAGGAAAACAACTAAAATTAGCTGTTTTTAGGATTCCAATTAAGTCTGAGCTTTACGAATTTCATCTTTTGTCATTGACAAAAAAATGGTTTTGCCTAACTGAAAACTCATGTGGTACCATATGTGTACTTTTTATTTGAACCTTTCTCATTTATGGAACCGATTTTGGAAACACTGACCCGAAGAGTGTCTGGTTTACATTGCTTCTATATTCTTATCATTTGAAACGTTGGGTTTAGTTGGATAAACAAACCAACGGTTATTTTTCTTGCATTTGTTGAGGTTTGGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGCCACATATATGATGGCTATGGATATGGTCTGCAACCTCATCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTACACTGTTTATGGAAGCCATCAACAACAAGTAATCTGAACACGAAAAAGCTCTAATAATTAATCCTTAGGCGCTTTCCAAGTAGAAACGCTGAAGTTGCTTCCACTTCTGAAATTCACTTGGTTTTAGATCTTTTCCATATTAATCAACCTTCCATCTGCCTAGTGGAACTAAATTTTGATGACCTAAGCTAGTTCTCTCATGTCGTAGGGGATATTTATATATTTATTTCATTCAGATTGTTACTCTTACTGAGATTGATAACAAACTTATTCTTTAGAATATATATATGGTCTTGCAATAGCGCATGTATGTTACAATAGTTCAGATTTTCGAATTTTCGAATAGAAAATTGATTTTAAGTTTCATTAACATTAGGTTTATTTTGTGAGAATTTTTGGATGCCTTTTGACATCTGAATTTTATGTATATCAAAATTTTATGTACACTTTGTGAGAATGATGTGCGGCTAGGTTTGTATTGAGTATTTTAAATTGTATATTTGATTTGTGTTATAGGTTATTGTTTTCATTCTATGATTGGAACATATATCAATGAACAGTTTCTAAAAAGTCCACCCGAAATAATAAGATAAATAGTAAAACACGTGCATAAGAATATTAATTTTAGTGTAAGTGGGGAGTTTGTATAATAATCGAGAAATAAATACAGCGTAATTGAGGAAATTGTTGGATGGTCCTTATTAATCAGATTATACATAACATATTCGATTTCAAAATTGAAATCAGCACCATTTTGTGATTTCACCCTCTTTTTTAATTCAAATCTATTTTTAATATTCATAATAGATTTTCATAACTATTTTACCAATTAATTCAAAATAATACAATTTATTCCTTATTTTCTCTTCATATTTTTAGTTTGAGATTATTTTTATTATCAAATTAGCTTTGATCTCGGATATTTTGTATTTCGATTGCATCTTAACAGTTTTCATTATTTTATATATATTTTGATTAAATTTGTTGTATATTTTTCCTTTTTCATTTTAATGGTTTATATCATTTATATATTATCATATTATTATGTTTTTTTTAGAGTTTTTGAGATGTATTCGCGATCTCAACAAAAGTGGTTGGTATCTACAACTAAATAAGTTCTCTTTTGGGTTGTAGTATATTGTTTTTGCTATAACTTTACCACGAATTAGACTCTTGTTTGATAGTAGATGGGATAAAAAGTCACATTATCATGATGGTAGATGGGATAAAAAGTTACATTATCATGATGGTAGATGGGATAAAAGAGTTGTTAAAGTATATATTCCATCAGATTCATCTTTTCATCAGAAAAAAGTTTGTATTGAAGAAAATTTGTATTTCTGAACGGCTAGGGTGATTTACTTGTGATCTTTTCTACCCAAAGGTAGTTTGTAAAAACCCTAATTTATTTTTATTTGAAATATTTGTTTTAGTTTTGAATTATTTTCTTTTAATTGAAACCTTGTTTAGCGTGATGATAATTACTTGTAGGTGAGATAAGACATTTGTCCTAATGCATCCTGCAACGTGATAATAAAGTGTATTTGTGATTTTTGGAATGGTTTTGAAATCCTCTACCTCCCTAATTTTTAACATTACCTATGTCAGGTTTATTGGGGATAATTTTGGCAACTTCTATTCATTATTTTCAATTATTTAATTTTGTTTGCTATTTGAACAATTTAGCAATATTTTTGCTATTTTTACAAATTAAACTTTAATTTTTGCCATTAATCTGGCTACCCCTTTTTTCAAATATAGTTGTATAGAGGGCCCTTTATTGAGGCTCAAATGAAAAATAGGTAACTTTTTTAAAGTCAATGAATTTTGGTCTTTTGTTTATATCATCATGGTGTGAAATTAGCATTTTAATCCCAAAATGCATCATTCTTCTCTTTTATTTGTTTTTCAGCTTTTTCCTTCATTTTTCGAGTTTCTTCTTCTTATTGAGATCAAGTAGCAACATATAACATATAACATACAGCGCAAGTGTAGAGCGTTGAGTGATGTTCTCAGTTGCAAGCATGCGAGCGGTTCTCAAGGTGGAATCCGTGAATTCACAAGCTGCTAACACAAGCAAAAGATCACTTTTCATTCAATTTCAAAAAATGTAATCAGTTTTTGTTTGACCCCTAAAAGAGGCCATCTATATAACGAACCAAATAGACAACAACAAAGGGTTTGGTCGGTATTGGGGTCGATGGTTTGGCTTTACAAGGCAAATATTTGTCACTGTTGGGCATAGGAGAAGCATTTGCCGTTTGAAGTGCTTGCTTTTCAACATTACACTATTTTTCAATCTAATGAGATCCCCACGAATCTAACCCTTTTGATTCTCTACCATTATCATTAGCCACCACAATGCCTTTTGGAATTTTCACAGAATCTTAATCATTCTATTGGCAATCTTTTTCTATGTTCAAATCCATGTGGTATTATATTGCATTTTTTAAAATTATTTTTGTCTTAACATAACACAACCCTCTAATTTTTTGGTCCAACAAGATGAATCTCTTGATATAGTCTCGATAATCATAGTTAAAACACTTATTTCTATCATAATTGAAAACCATATATTTGATAACAAAATATTCAGACACTTACTCTTAACATGTCTCTTCATACCCTTCACTCATCTACTTTTACCACTTAAAAGCAAACTTAAGAGAGTTTTACCATTGACCCAATGTTCAATGTTCATTAAAATTCCATTCACTTAAAAATAAAAATACGTCCTCATTATTTAAAAAAAGTGAGCCACCGTTTCAGCTCCAATTTTGCCTAAAAGAAAAGAAATTTACATTTATTATTTTATGCCAATTCAACTCTTCATTATATAGAGTATAAATACCTATTAGAAAGTAAAGTAATAAATTTTAATTTTAAGGTTAAAAATAAAAATAATCTAATAAGTGATTTAGAAAATGGGATATGGTGGACATCCCTAGTTCAACCTAGAGTATGGATTTGATCCAAATCTCTATGGGCTGGTGGTATTGAATTTGATCCAATAATAACTAGCTCAATTTTTATTTTAAAATATTTAATTATTCTCTCGTTAACATCATTTTTTTAATTTTAACTTTGTTTTTCTTATTTATTAATTTATGTTGATGTTCATTTAATGAGTGGTATTTCAAATTAATATTTCATTTAGGGAATGAAAATTTACCTATTTTCTTTTATATTCATAGCTGAAAATCTATCACACTTCTCAATTGATATCTCAAGCATACGTCAAATATATTGGTAATATATTGAAAAATATAAATATACATAACATATCCAACGATTAATTTTTTGGTATGTTTACAAATATACCAAAAAATATAAATATATATAGCATATATTATTCAATATATAAGACAATATATCAATTTTTTTTCTAAAAGGTGCAACAATTTTTAAGTCACCCAACCTAGTATTACTCTCGCTAAACATATTTAACTTTGCAATGCATTAGTGTTGCACCTGACAAGATTTATTTCTAAAAATTTCAAATATTATGTATTATATATATCAAATATACCTGGTATATATAGCAACAGCATTGGCCCAAAAAACCTTTCCGGTTTGTCGTCATCCTCAGAACTCCAAATAAAACTTCAGGCTTATACCCTAATCCACTCCTATTCACCACTCCTATTCACTTCCCCTTTCGCTAAACTCTTCAGATTCCGATTCTTTTTTCTCTTCTTCCTCTCCTTCAATTCAGATTCTTTTTCCCTTTTGGGTTAGGCTGTACATTAAAATCTGCTTCATTCATTCTTTTGTTTCTTTGTTTTTCCACTGTCAATACGGAGGAAGATAAGATGCAGAGCAACGGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCAACAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCAATATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGGTTTAATTTTCTCTCTTCTTTTTCACTTATCTCTACGTTTATTGTACGCGTTTTTAGTTTGACGATCAATGTTTAACATTCACTCCCTGTATATTACTAGTCTAACAAGTCGTTTCGATGAATTGATAATATGATTATTTGCTGACTTGCTGGAATTTTAATTGTTAAAGTTCTCAATTAAATCACTCTTTTTGATTAATTGATAAATTCTAGTCGTTAAATTAAGGGTATAAATTCTATTCGTTGAATTATTGGAATTTAACAAATCTCAATGAGAAAGGATTGATAACTGGTATGTGGTAAAACAACATAGAGGTATGTTTTAAGGCTTTATTAGTCCTGTTTAGAATTACTGTATCTTCTAACCTCTCCAATTCACTGCCTATTGAATATTGTGGAAAGGATACGAAGAAATATTTTATTAGATTATGTTATTAATAAATGGAAGATTACATTCTGTAGTAATTGGAAGATTGCATTATGTTATGATTAGATTATGTCGATTACTAGAGAATGTGTAGCACTTTGTTTGAAAAATGTCAACGTCAATTACATTCTCTAGTAAATGGAAGATTACATTCTCTTGTAGTCCACCTTTAGTGTTCTCTTAGAATCTTTTTTAGTTGAAAAATCTTGAATTGTTCTTAGGTCTGGTCATGTTGAACGTTGATTGATCTATTTTCTGTATGATGCAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCGGTCAAAGCAGCAAAAGTTGTAATTGATGCCAACACCGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGTATATTTTTATTTTAGGGTTTAGTGTACTTAGTCTAAAACCACTTCCAAGAAAGAGTAGGATTAGTCTTTGGGGAGGGAGTGCAATTCTGGAATAAATGAAAATGTGAAGGTTTTCTTTCTCCCTAGACATTTGGTTCAAGACTTGGGGTTATGTATCAAAAAAGGGTTATGAAAATGATTACTACAATGCTAACATAGAAATTTGGGGTTTGATCTTATTGTCCTCCTTAGAAATTTTGTAGCAGTTAATGTTTGTGTGTCAAACATCATGTCAGATAACAGAGCACACAAGCTATCCATTATATTGACTTACTTTTTGTAGATGTGTAATAATTCAGACTGAAGTGGTTCATATGCTCAAACTGGGGTTGCAAGTCAGTTTACTTCCTTATAATTCAGGCTAAAGATGGTATTTTGTTATATCTTTCATTTTTCAGGCATCCAATAATGCTACATGTTTATTTAAGCAGTTTTCTTTTGTGGAGTTATTTTTATCAATAAGATAGGCCATTCAGGCTAAACTTGTGTTAAGTAAGTTTTGAATTGGAGCCGTTTTTATGGCATTTTCTTTTGACAACTTCTGTAAAAAAAATTCTGCGAATCCTCCTTGAGCAAAAGTAGTTCTGAAATAGCATCTTCAAAGAATTGAACCTTAAGGATTTAATTCTTTGAATGCCTGTTTTCTTAGGGTTTAGTCATGGTTGTACACTTCCATACCTTTTGGACTGCTTATATATATATATATATATTGTCCTCTGGTTTTTATAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTGTGAGTTACTTTGATTATTTTTGTTTGCATGGCTAGAGATCCCACCTCATATTCTTGGGTTAACCGGAGCTTTCCTTTTTAGATATTTGTTGGAATTAACCCAAGCTTTCCTTTTAGATATTTGTTGGAGGGCTAGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTTGCAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTCCAATTTGCCAACAGGTAAAATTTCTGTAAGCAGGTTTTCTTTTCTTATCATATGAACAATGAAATAATAGTATCTATCTGGTTATTGGTTTTGTTTATTTACTGAGTTACTAATTTTTGTCACATTCTTCTCAAATTTCCTTTGCAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCACATAAGCAGGCAAATTACCCTTCCCCCTACTGTGAAAATTATTCTATACATCACTCAATTTCCCTAACTTTCCTGGAGGGCAAGGATAGGAAAACAACTAAAATGAGCTGTTTTTAGGATTTTAATGAAGTCTGGGCTTTACTTTGGACGAGGAATTTTTGTGGCTACCTACTTTGGATTAAATATTTTATAGGTTTCCTTGATATCCAACGTAGGGTTAGGCGGGTTGTCATGTAAGAATAGGTGTGCGTAAGCTGGCTTAGAAACTCACAAATAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAACTTTGGTTGATGAATTTCCATGTTTAATCTTTCGTCATTGACAAAAAAATGTTTTTGCCTTAACTGAAAACTCATGTGGTACCATATGTGTACTTTTTATTTGAACCTTTCTCATTTTTGGAACTAATTTCGGAGACACATAGCCGAAACATTGCTTCTAAATTCTTATCATTTGATGTGTTCGATTTAGTTGGATAAACAAACTTAACAGTACTTTTTTCTTGCATTTGTTGAGGTTTGGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATAATGGCTATGGATATGGTGTGCAGCCTCATCACGATCCGAGTATGTATCACGCAGCTTATGGAGCTTATACGGTATATGGAAGCCATCAACAACAAGTAATCTGAACCCGAAAAAGCTCTAATTAATCTTTAGGCACTTTCCAAGTAGAAAAGCTGAAGTTGCTTCCACTTCTGGAATTCACTTGGTTTTAGATTTTTTCCATATCAATCATCCTTCCATCTGCCTAGTGGAACTCAATTTTGATGATCTAAGCTAGTTCTCTCATGTCGTAGGGGATATTTATATATTTATTTCATTCAGATTGTTACTCTTACTGAGATTGATAACAAACTTATTTATTAGAATACATATGATCCCGCCATGGTGCATGCATATTACAATGTCTCAGTTCAGATTTTTGGCTTTTCGAAATATAAGATTGACTTTAATTTCATTTATATTATGTTTATTAGGTGAGAATTTTTGGAATGATATGCGGCTAGGTTGGAATTGAGTTGATATATATAGAGGATTTTAAATTGTCAAATTAATTTGTGTTGGGTATTTGTTTTGATTCTATGATTGGAACATACATCAATTAACAGTTTCTAAGAACTCCACCCTACGCTTGTCTAGACTAGGCGCAACGCGTGCCTTGTGTGAAGCCTTGAGATCCAAAGTTCTAGGCCTGGGTTTATTTTTTTTATTTTTTATTTTTAATTTTTTTTTTCTCTCTCAATATTTGGGAAAAGTAATAGTAATTAGGATTTTCCTCTTTATTAACTAAGAAATTTACCAAGTCGGAATATAAAATTCATTTGTGTTTAGGATTTTTTTTTAATCATATATATTAATTCAAGACAAATTAGAGTGGAGTTTCAATTTAATTTATTTATTTTATTAGCAATGGAATTAGTTTTTCATGTGATATGCCTTTTTGTTTGGACGAGTTTGAGTTTTGGAAAGTCTCAACTCACCTCTGGAGATAGGCTTTTGGCCACTTTGAGTGGTACTACCCACACCCTATCCTATTGGATCTGATTCCATCCAAACTTCTCTATCTTCCACTTGTCCCATTTGTATTTTTTTTTTTTTTTTTTCATTTTGTTCTAATCTTTTTTAAAAAATACAATTTCATTAGTTGCCAATTTGATTGAGCATACAAATATATTTTGGGCTAAATTATAGAAAATGCTTTTGAATTTTGCATTTTGTGTCAAAAATATTTATAAATCAACAATACCCTTAAACTTTAAAAAAGAGTTTAAGAAAAACTTTTATCGTTAGTTTTAGATAAAAACCGTTAAATTTTTGTTTTAAAAATACTCCTAAACTTTCAAAGTTTGAAAAATATTCTTAAACTAAACTATTAACATACAACTTTGTTAAAATATTTAAGCCCTAAAATCTTGTATTATTATTATTATTATTTTTTAATTATAATCCACATACCTTAACTGAAGTGGGCACTTTTATTTATCTATTTTAGATATACAAATGACAAACATTTAACAAAAATGTGAGTAGAAGAGTATTGAAGGAGAGAGGAGAAAAAAGAGGGGAAATAGAGAACTAAGATGGTATTAACGATTTTTGTTGATATAGTAAGAGTATTTTTAATTTTTTTAAAAAAAAGTTTAGGGGTTTTTTGAAACTTTTGAGAGTTCAATGGTGTTTTTGACACAAATGACTAACATTTTCTATCTACAACTAACAATAATGATATTTTTTAACTCATTTTGGAAGTTTAATGATTTTTTTTGAAACTTCTGAAGTTAAGAAATATTTTTGACACAAAAATTTAGAGATATTTTATATAATTTAGTCTGTATTTTACGTTGATTTCAATCTTTGCATTTTTACGTATGATATAATATTAAAAGAAAGTTATATTAGATGTATTTTTCATTTCTTTTTTTTTTGAAAAAAAAAAAAAAAGAGTTCAATGAAGATGCATTCATCCACCTACAACATTGAGGATCCATGTACTACCCTTGATTTGAAATGCCATGAAAATTAG

mRNA sequence

CAAAAACCTTCCGGTTTGTCGTCATCCTCAAAACTCCAAAATAAATCCTCAGGCTTAGACCCTAATCCTCTCCTCTATTCACTTCCCCTTTCGCTAAACTCTTCAGATTCCGATTCTTTTTTCTCTTCTTCCTCTCCTTCAATTCAGATTCTTTTTCCCTTTTGGGTTAGGCTGTACATTAAAATCTGCTTCATTCATTCTTTTGTTTCTTTGTTTGTTTGTTTGTTTGTTTTTCCACTGTTAATACGGTCGAAGATAAGATGCAGAGCAACGGTTCTGATTCGCAGCCGCATGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCATCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACGTTTAGCACCAGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGATAAGATGCAGAGCAACGGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCAACAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCAATATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCGGTCAAAGCAGCAAAAGTTGTAATTGATGCCAACACCGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGACCTATGCGCATTGGTGCAGCAACGCCCAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCACATAAGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATAATGGCTATGGATATGGTGTGCAGCCTCATCACGATCCGAGTATGTATCACGCAGCTTATGGAGCTTATACGGTATATGGAAGCCATCAACAACAAAGTTCAATGAAGATGCATTCATCCACCTACAACATTGAGGATCCATGTACTACCCTTGATTTGAAATGCCATGAAAATTAG

Coding sequence (CDS)

ATGCAGAGCAACGGTTCTGATTCGCAGCCGCATGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCATCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACGTTTAGCACCAGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGATAAGATGCAGAGCAACGGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCAACAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCAATATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCGGTCAAAGCAGCAAAAGTTGTAATTGATGCCAACACCGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGACCTATGCGCATTGGTGCAGCAACGCCCAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCACATAAGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATAATGGCTATGGATATGGTGTGCAGCCTCATCACGATCCGAGTATGTATCACGCAGCTTATGGAGCTTATACGGTATATGGAAGCCATCAACAACAAAGTTCAATGAAGATGCATTCATCCACCTACAACATTGAGGATCCATGTACTACCCTTGATTTGAAATGCCATGAAAATTAG

Protein sequence

MQSNGSDSQPHEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHHYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGFQQKHSPQDKMQSNGSDSQPQEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDLCALVQQRPESLLDFSNSILHKEDIQQMVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQQSSMKMHSSTYNIEDPCTTLDLKCHEN

Homology

[Close]

BLAST of CaUC05G099270 vs. NCBI nr
Match: XP_008452518.1 (PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo])

HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-156
Identity = 298/421 (70.78%), Postives = 322/421 (76.48%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWI-PMQYPPPAMVMPHHMMT------PPLPPPYMHYH 324
           MQSNGSDSQPQEPNQRHQQ  QPWI PMQYPPP MVMPHHMMT      PPLPPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
           HQY HHHLPIQHSQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           TGLSEGYGFVEF SHATAEK LQNYSG+FMP+TEQTFRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 505 DL-CA--------------------------------LVQQRPESLLDFSNSIL------ 564
            + C+                                   Q  +S  D +N+ +      
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 565 --------------HKEDIQQMVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVR 624
                         H E +   +P+      ++      NDAEEALQKLN TVIGKQTVR
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQF--ANRNDAEEALQKLNGTVIGKQTVR 360

Query: 625 LSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQ 626
           LSWGRNPA+KQFR+FGNQWNGAYYGGHIY+GYGYG+   HDPSMYHAAYGAYTVYG+HQQ
Sbjct: 361 LSWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQ 419

[Close]

BLAST of CaUC05G099270 vs. NCBI nr
Match: XP_022140707.1 (polyadenylate-binding protein RBP47-like [Momordica charantia])

HSP 1 Score: 557.4 bits (1435), Expect = 1.7e-154
Identity = 299/417 (71.70%), Postives = 326/417 (78.18%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMT------PPLPPPYMHYHH 324
           MQSNGSDSQPQEPNQR QQPQQ W+PMQYPP AMVMP HMMT      PPLPP YMHYHH
Sbjct: 1   MQSNGSDSQPQEPNQRLQQPQQ-WMPMQYPPAAMVMPPHMMTPQPYMPPPLPPQYMHYHH 60

Query: 325 QYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQT 384
           QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+++KVIRNKQT
Sbjct: 61  QYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQT 120

Query: 385 GLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIFV 444
           GLSEGYGFVEFF+HATAEKALQNYSG+FMPNTEQ FRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 445 GDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMND 504
           GDLAADVTD+LLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 
Sbjct: 181 GDLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNG 240

Query: 505 L-CAL---------------VQQRPESLLDFSNSILHKEDIQQMVPLAMV---------- 564
           + C+                 QQ+  S   +S++    + +Q     A            
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQYSSQGGYSSNGSFSQGLQSEGDSANTTIFVGGLDPN 300

Query: 565 ----------SNLMEILQIQL--------------NDAEEALQKLNATVIGKQTVRLSWG 624
                     S   EI+ +++              NDAEEALQKLN TVIGKQTVRLSWG
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWG 360

Query: 625 RNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQQ 626
           RNPA+KQFRDFGNQWNGAYYGGH+Y+GYGYG+ P HDPSMYHAAYGAY VYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGAYYGGHMYDGYGYGLPP-HDPSMYHAAYGAYPVYGSHQQQ 415

[Close]

BLAST of CaUC05G099270 vs. NCBI nr
Match: XP_004141245.1 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8649857.1 hypothetical protein Csa_012060 [Cucumis sativus])

HSP 1 Score: 557.0 bits (1434), Expect = 2.2e-154
Identity = 298/424 (70.28%), Postives = 323/424 (76.18%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWI-PMQYPPPAMVMPHHMMT------PPLPPPYMHYH 324
           MQ+NGSDSQPQEPNQRHQQ   PWI PMQYPPP MVMPHHMMT      PPLPPPYMHYH
Sbjct: 1   MQNNGSDSQPQEPNQRHQQQPHPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
           HQY HHHLPIQ SQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  HQYHHHHLPIQPSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           TGLSEGYGFVEF SH TAEK LQNYSG+FMP+TEQTFRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 505 DL-CA--------------------------------LVQQRPESLLDFSNSILH----- 564
            + C+                                   Q  +S  D +N+ +      
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 565 ----KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQ 624
                ED++Q       S   EI+ +++              NDAEEALQKLN TVIGKQ
Sbjct: 301 PNVTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQ 360

Query: 625 TVRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGS 626
           TVRLSWGRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+   HDPSMYHAAYGAYTVYG+
Sbjct: 361 TVRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGN 419

[Close]

BLAST of CaUC05G099270 vs. NCBI nr
Match: XP_023535397.1 (polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-153
Identity = 296/423 (69.98%), Postives = 329/423 (77.78%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMTPP-------LPPPYMHYH 324
           MQSNGSDSQPQEPNQRHQQPQ  W+ MQYPPPAMVMPHHMMTPP        PPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQS-WMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
            QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+++K+IRNKQ
Sbjct: 61  PQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISSIKIIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+TEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTD+LLY+TFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 505 DL-CAL-------------------------------VQQRPESLLDFSNSILH------ 564
            + C+                                + Q  +S  D +N+ +       
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPLSQGLQSEGDSANTTIFVGGLDP 300

Query: 565 ---KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQT 624
               ED++Q       S   EI+ +++              NDAEEALQKLNATVIGKQT
Sbjct: 301 NVTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQT 360

Query: 625 VRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSH 626
           +RLSWGRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+ P HDPSMYHAAYGAYTVYGSH
Sbjct: 361 IRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPP-HDPSMYHAAYGAYTVYGSH 416

[Close]

BLAST of CaUC05G099270 vs. NCBI nr
Match: XP_022936173.1 (polyadenylate-binding protein RBP47C-like [Cucurbita moschata])

HSP 1 Score: 552.7 bits (1423), Expect = 4.1e-153
Identity = 295/418 (70.57%), Postives = 325/418 (77.75%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMTPP-------LPPPYMHYH 324
           MQSNGSDSQPQEPNQRHQQPQ  W+ MQYPPPAMVMPHHMMTPP        PPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQS-WMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
            QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEIA++K+IRNKQ
Sbjct: 61  PQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEIASIKIIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+TEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTD+LLY+TFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 505 DL-CAL---------------VQQRPESLLDFSNSILHKEDIQQMVPLAMV--------- 564
            + C+                 QQ+  S   +S +    + +Q     A           
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDP 300

Query: 565 -----------SNLMEILQIQL--------------NDAEEALQKLNATVIGKQTVRLSW 624
                      S   EI+ +++              NDAEEALQKLNATVIGKQT+RLSW
Sbjct: 301 NVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSW 360

Query: 625 GRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQQ 626
           GRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+ P HDPSMY AAYGAYTVYGSHQQQ
Sbjct: 361 GRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPP-HDPSMYQAAYGAYTVYGSHQQQ 416

[Close]

BLAST of CaUC05G099270 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.2e-93
Identity = 215/404 (53.22%), Postives = 261/404 (64.60%), Query Frame = 0


Query: 275 QEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQH--SQP 334
           +E NQ    P  P   M+Y PP +++PH MM    PPP+  YH    HHHL  Q   ++ 
Sbjct: 36  EEENQPKTSPTPPPHWMRY-PPTVIIPHQMMY--APPPFPPYHQYPNHHHLHHQSRGNKH 95

Query: 335 LPGSGGENKTIWVGDLHHWMDESYLNSCFSS--IGEIAALKVIRNKQTGLSEGYGFVEFF 394
                GENKTIWVGDLHHWMDE+YLNS F+S    EI ++KVIRNK  GLSEGYGFVEF 
Sbjct: 96  QNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFE 155

Query: 395 SHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDSL 454
           SH  A+K L+ ++G  MPNT+Q FRLNWA+FSTG+KR +N+ PDLSIFVGDL+ DV+D+L
Sbjct: 156 SHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNL 215

Query: 455 LYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDL-CA------- 514
           L+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMN + C+       
Sbjct: 216 LHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG 275

Query: 515 ---------LVQQ----------RPES-------LLDFSNSILHKEDIQQ---------- 574
                      QQ          RPE         +   +S +  ED++Q          
Sbjct: 276 PATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVS 335

Query: 575 -MVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRD-FGNQW 628
             +P+      ++   +   +AEEAL+KLN TVIGKQTVRLSWGRNPA+KQ RD +GNQW
Sbjct: 336 VKIPVGKGCGFVQF--VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 395

[Close]

BLAST of CaUC05G099270 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.0e-91
Identity = 213/406 (52.46%), Postives = 254/406 (62.56%), Query Frame = 0


Query: 276 EPNQRHQQPQQP---WIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQH--S 335
           E NQ    P  P   W  M+YPP  ++MP  M  PP P P+  YH    HHH   Q   +
Sbjct: 37  EENQPKTSPTPPPPHW--MRYPP--VLMPQMMYAPPPPMPFSPYHQYPNHHHFHHQSRGN 96

Query: 336 QPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSI--GEIAALKVIRNKQTGLSEGYGFVE 395
           +      GENKTIWVGDL +WMDE+YLNS F+S    EI +LKVIRNK  G SEGYGFVE
Sbjct: 97  KHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVE 156

Query: 396 FFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTD 455
           F SH  A+K LQ ++G  MPNT+Q FRLNWA+FSTG+KR +N+ PDLSIFVGDLA DV+D
Sbjct: 157 FESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSD 216

Query: 456 SLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDL-CALVQQR 515
           +LL+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMN + C+    R
Sbjct: 217 ALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMR 276

Query: 516 -------------------PESLLDFS--------------NSILHKEDIQQ-------- 575
                              P      S              +S +  ED++Q        
Sbjct: 277 IGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 336

Query: 576 ---MVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRD-FGN 628
               +P+      ++   +   +AEEAL+KLN TVIGKQTVRLSWGRNPA+KQ RD +GN
Sbjct: 337 VSVKIPVGKGCGFVQF--VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGN 396

[Close]

BLAST of CaUC05G099270 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-86
Identity = 197/430 (45.81%), Postives = 250/430 (58.14%), Query Frame = 0


Query: 268 NGSD--SQPQEPNQRHQQPQQPWI----------PMQYPPPAMVMPHHMMTPPLPPPYMH 327
           NG D   Q Q+  Q+HQQ QQ W+           MQYP  AM M   MM       YM 
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAMQQQMM---YGQQYMP 61

Query: 328 YHHQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRN 387
           Y+ Q+Q      Q    +  S  +NKTIW+GDL  WMDESYL+SCFS  GE+ ++K+IRN
Sbjct: 62  YYQQHQQQQKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRN 121

Query: 388 KQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLS 447
           KQTG SE YGFVEF +HA AEK LQ+Y+G  MPNTEQ FRLNWA FSTG+KR++   D S
Sbjct: 122 KQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFS 181

Query: 448 IFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTE 507
           IFVGDLA+DVTD++L +TF+S+YPS+K AKVV+DANTG SKGYGFVRFGD++ERS+AMTE
Sbjct: 182 IFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTE 241

Query: 508 MNDLCALVQQRPESLLDFSNSILHKEDIQQMVPLA------------------------- 567
           MN +    +     +        H++   Q V L+                         
Sbjct: 242 MNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIF 301

Query: 568 ---------------MVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQ 627
                            +   E++ +++              + A+EA+QKL+  +IGKQ
Sbjct: 302 VGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQ 361

[Close]

BLAST of CaUC05G099270 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-81
Identity = 195/410 (47.56%), Postives = 242/410 (59.02%), Query Frame = 0


Query: 274 PQEPNQRHQQPQQPWIPMQYPPPA---------MVMPHHMMTPPLPPPYMHYH---HQY- 333
           PQ+  Q+ QQ QQ    MQYPP A         M+M  H   P    PY  +H   HQY 
Sbjct: 27  PQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYG 86

Query: 334 ---QHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 393
              QH H   QH     GSG + KT+WVGDL HWMDE+YL+SCFS  GE++++KVIRNK 
Sbjct: 87  SYQQHQHQ--QHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKL 146

Query: 394 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRS-DNDPDLSI 453
           T  SEGYGFVEF S A AE+ LQNYSG  MPN++Q FR+NWA+FSTG+KR+ +N PDLS+
Sbjct: 147 TSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSV 206

Query: 454 FVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEM 513
           FVGDL+ DVTD LL+ETFS +YPSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A+TEM
Sbjct: 207 FVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEM 266

Query: 514 NDLCALVQQRPESLLDFSNSILHKED-IQQMVPLA------------------------- 573
           N      +Q    +     +I +++    Q V LA                         
Sbjct: 267 NGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIF 326

Query: 574 ---------------MVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQ 611
                            S   E++ +++                AE+A++ LN TVIGK 
Sbjct: 327 VGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKN 386

[Close]

BLAST of CaUC05G099270 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.5e-78
Identity = 197/418 (47.13%), Postives = 242/418 (57.89%), Query Frame = 0


Query: 270 SDSQPQEPNQRHQQPQQPWIP--MQYPPPAMVMPHHMMTPPLPPP--------------- 329
           S   PQ+  Q+  Q QQ W+    QYP  AM M         P P               
Sbjct: 30  STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89

Query: 330 --YMHYHHQYQHHHLPIQHSQPLPGSGGEN-KTIWVGDLHHWMDESYLNSCFSSIGEIAA 389
             Y  Y  Q Q HH   Q  QP  GSGG++ KT+WVGDL HWMDE+YL++CFS   E+++
Sbjct: 90  FQYAAYQQQQQQHHQSQQ--QPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSS 149

Query: 390 LKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKR-S 449
           +KVIRNKQT  SEGYGFVEF S + AE+ALQ++SGV MPN EQ FRLNWA+FSTG+KR S
Sbjct: 150 VKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRAS 209

Query: 450 DNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNE 509
           +N PDLSIFVGDLA DV+D++L ETF+ +YPSVK AKVVID+NTGRSKGYGFVRFGD+NE
Sbjct: 210 ENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENE 269

Query: 510 RSQAMTEMND-----------------LCALVQQRPESLL---------------DFSNS 569
           RS+AMTEMN                    A  QQ     L               + +NS
Sbjct: 270 RSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNS 329

Query: 570 ILH----KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVI 616
            +       D+ +   +   S+  E++ +++                AEEA+  LN TVI
Sbjct: 330 TIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVI 389

[Close]

BLAST of CaUC05G099270 vs. ExPASy TrEMBL
Match: A0A0A0L4T7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639100 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 1.6e-158
Identity = 291/369 (78.86%), Postives = 312/369 (84.55%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWI-PMQYPPPAMVMPHHMMT------PPLPPPYMHYH 324
           MQ+NGSDSQPQEPNQRHQQ   PWI PMQYPPP MVMPHHMMT      PPLPPPYMHYH
Sbjct: 1   MQNNGSDSQPQEPNQRHQQQPHPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
           HQY HHHLPIQ SQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  HQYHHHHLPIQPSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           TGLSEGYGFVEF SH TAEK LQNYSG+FMP+TEQTFRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 505 DL-CALVQQRPESLLDFSNSILHKEDIQQMVPLAMVSNLMEILQIQLNDAEEALQKLNAT 564
            + C+    R  +     +S   ++   Q     ++           NDAEEALQKLN T
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGKKFVIR----------NDAEEALQKLNGT 300

Query: 565 VIGKQTVRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAY 624
           VIGKQTVRLSWGRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+   HDPSMYHAAYGAY
Sbjct: 301 VIGKQTVRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAY 359

Query: 625 TVYGSHQQQ 626
           TVYG+HQQQ
Sbjct: 361 TVYGNHQQQ 359

[Close]

BLAST of CaUC05G099270 vs. ExPASy TrEMBL
Match: A0A1S3BUU0 (polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 6.6e-157
Identity = 298/421 (70.78%), Postives = 322/421 (76.48%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWI-PMQYPPPAMVMPHHMMT------PPLPPPYMHYH 324
           MQSNGSDSQPQEPNQRHQQ  QPWI PMQYPPP MVMPHHMMT      PPLPPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
           HQY HHHLPIQHSQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           TGLSEGYGFVEF SHATAEK LQNYSG+FMP+TEQTFRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 505 DL-CA--------------------------------LVQQRPESLLDFSNSIL------ 564
            + C+                                   Q  +S  D +N+ +      
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 565 --------------HKEDIQQMVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVR 624
                         H E +   +P+      ++      NDAEEALQKLN TVIGKQTVR
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQF--ANRNDAEEALQKLNGTVIGKQTVR 360

Query: 625 LSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQ 626
           LSWGRNPA+KQFR+FGNQWNGAYYGGHIY+GYGYG+   HDPSMYHAAYGAYTVYG+HQQ
Sbjct: 361 LSWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQ 419

[Close]

BLAST of CaUC05G099270 vs. ExPASy TrEMBL
Match: A0A6J1CHT5 (polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC111011304 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 8.0e-155
Identity = 299/417 (71.70%), Postives = 326/417 (78.18%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMT------PPLPPPYMHYHH 324
           MQSNGSDSQPQEPNQR QQPQQ W+PMQYPP AMVMP HMMT      PPLPP YMHYHH
Sbjct: 1   MQSNGSDSQPQEPNQRLQQPQQ-WMPMQYPPAAMVMPPHMMTPQPYMPPPLPPQYMHYHH 60

Query: 325 QYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQT 384
           QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+++KVIRNKQT
Sbjct: 61  QYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQT 120

Query: 385 GLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIFV 444
           GLSEGYGFVEFF+HATAEKALQNYSG+FMPNTEQ FRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 445 GDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMND 504
           GDLAADVTD+LLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 
Sbjct: 181 GDLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNG 240

Query: 505 L-CAL---------------VQQRPESLLDFSNSILHKEDIQQMVPLAMV---------- 564
           + C+                 QQ+  S   +S++    + +Q     A            
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQYSSQGGYSSNGSFSQGLQSEGDSANTTIFVGGLDPN 300

Query: 565 ----------SNLMEILQIQL--------------NDAEEALQKLNATVIGKQTVRLSWG 624
                     S   EI+ +++              NDAEEALQKLN TVIGKQTVRLSWG
Sbjct: 301 VTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWG 360

Query: 625 RNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQQ 626
           RNPA+KQFRDFGNQWNGAYYGGH+Y+GYGYG+ P HDPSMYHAAYGAY VYGSHQQQ
Sbjct: 361 RNPANKQFRDFGNQWNGAYYGGHMYDGYGYGLPP-HDPSMYHAAYGAYPVYGSHQQQ 415

[Close]

BLAST of CaUC05G099270 vs. ExPASy TrEMBL
Match: A0A6J1FCI8 (polyadenylate-binding protein RBP47C-like OS=Cucurbita moschata OX=3662 GN=LOC111442850 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 2.0e-153
Identity = 295/418 (70.57%), Postives = 325/418 (77.75%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMTPP-------LPPPYMHYH 324
           MQSNGSDSQPQEPNQRHQQPQ  W+ MQYPPPAMVMPHHMMTPP        PPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQS-WMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
            QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEIA++K+IRNKQ
Sbjct: 61  PQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEIASIKIIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+TEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTD+LLY+TFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 505 DL-CAL---------------VQQRPESLLDFSNSILHKEDIQQMVPLAMV--------- 564
            + C+                 QQ+  S   +S +    + +Q     A           
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDP 300

Query: 565 -----------SNLMEILQIQL--------------NDAEEALQKLNATVIGKQTVRLSW 624
                      S   EI+ +++              NDAEEALQKLNATVIGKQT+RLSW
Sbjct: 301 NVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSW 360

Query: 625 GRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQQ 626
           GRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+ P HDPSMY AAYGAYTVYGSHQQQ
Sbjct: 361 GRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPP-HDPSMYQAAYGAYTVYGSHQQQ 416

[Close]

BLAST of CaUC05G099270 vs. ExPASy TrEMBL
Match: A0A6J1ILR0 (polyadenylate-binding protein RBP47C-like OS=Cucurbita maxima OX=3661 GN=LOC111476746 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 3.4e-153
Identity = 295/423 (69.74%), Postives = 327/423 (77.30%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMTPP-------LPPPYMHYH 324
           MQSNGSDSQPQEPNQRHQQPQ  W+ MQYPPPAMVMPHHMMTPP        PPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQS-WMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
            QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+ +K+IRNKQ
Sbjct: 61  PQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISLIKIIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+TEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTD+LLY+TFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 505 DL-CAL-------------------------------VQQRPESLLDFSNSILH------ 564
            + C+                                + Q  +S  D +N+ +       
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNFSQGEYLTNGPLSQGLQSEGDSANTTIFVGGLDP 300

Query: 565 ---KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQT 624
               ED++Q       S   EI+ +++              NDAEEALQKLNATVIGKQT
Sbjct: 301 NVTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQT 360

Query: 625 VRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSH 626
           +RLSWGRNPA+KQFRDFGNQWNG YYGGHIY+GYGYG+ P HDPSMYHAAYGAYTVYGSH
Sbjct: 361 IRLSWGRNPANKQFRDFGNQWNGPYYGGHIYDGYGYGLPP-HDPSMYHAAYGAYTVYGSH 416

[Close]

BLAST of CaUC05G099270 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 344.7 bits (883), Expect = 1.6e-94
Identity = 215/404 (53.22%), Postives = 261/404 (64.60%), Query Frame = 0


Query: 275 QEPNQRHQQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQH--SQP 334
           +E NQ    P  P   M+Y PP +++PH MM    PPP+  YH    HHHL  Q   ++ 
Sbjct: 36  EEENQPKTSPTPPPHWMRY-PPTVIIPHQMMY--APPPFPPYHQYPNHHHLHHQSRGNKH 95

Query: 335 LPGSGGENKTIWVGDLHHWMDESYLNSCFSS--IGEIAALKVIRNKQTGLSEGYGFVEFF 394
                GENKTIWVGDLHHWMDE+YLNS F+S    EI ++KVIRNK  GLSEGYGFVEF 
Sbjct: 96  QNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFE 155

Query: 395 SHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDSL 454
           SH  A+K L+ ++G  MPNT+Q FRLNWA+FSTG+KR +N+ PDLSIFVGDL+ DV+D+L
Sbjct: 156 SHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNL 215

Query: 455 LYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDL-CA------- 514
           L+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMN + C+       
Sbjct: 216 LHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG 275

Query: 515 ---------LVQQ----------RPES-------LLDFSNSILHKEDIQQ---------- 574
                      QQ          RPE         +   +S +  ED++Q          
Sbjct: 276 PATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVS 335

Query: 575 -MVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRD-FGNQW 628
             +P+      ++   +   +AEEAL+KLN TVIGKQTVRLSWGRNPA+KQ RD +GNQW
Sbjct: 336 VKIPVGKGCGFVQF--VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 395

[Close]

BLAST of CaUC05G099270 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 336.7 bits (862), Expect = 4.3e-92
Identity = 213/406 (52.46%), Postives = 254/406 (62.56%), Query Frame = 0


Query: 276 EPNQRHQQPQQP---WIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQH--S 335
           E NQ    P  P   W  M+YPP  ++MP  M  PP P P+  YH    HHH   Q   +
Sbjct: 37  EENQPKTSPTPPPPHW--MRYPP--VLMPQMMYAPPPPMPFSPYHQYPNHHHFHHQSRGN 96

Query: 336 QPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSI--GEIAALKVIRNKQTGLSEGYGFVE 395
           +      GENKTIWVGDL +WMDE+YLNS F+S    EI +LKVIRNK  G SEGYGFVE
Sbjct: 97  KHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVE 156

Query: 396 FFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTD 455
           F SH  A+K LQ ++G  MPNT+Q FRLNWA+FSTG+KR +N+ PDLSIFVGDLA DV+D
Sbjct: 157 FESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSD 216

Query: 456 SLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDL-CALVQQR 515
           +LL+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMN + C+    R
Sbjct: 217 ALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMR 276

Query: 516 -------------------PESLLDFS--------------NSILHKEDIQQ-------- 575
                              P      S              +S +  ED++Q        
Sbjct: 277 IGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 336

Query: 576 ---MVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRD-FGN 628
               +P+      ++   +   +AEEAL+KLN TVIGKQTVRLSWGRNPA+KQ RD +GN
Sbjct: 337 VSVKIPVGKGCGFVQF--VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGN 396

[Close]

BLAST of CaUC05G099270 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 305.1 bits (780), Expect = 1.4e-82
Identity = 195/410 (47.56%), Postives = 242/410 (59.02%), Query Frame = 0


Query: 274 PQEPNQRHQQPQQPWIPMQYPPPA---------MVMPHHMMTPPLPPPYMHYH---HQY- 333
           PQ+  Q+ QQ QQ    MQYPP A         M+M  H   P    PY  +H   HQY 
Sbjct: 27  PQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYG 86

Query: 334 ---QHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 393
              QH H   QH     GSG + KT+WVGDL HWMDE+YL+SCFS  GE++++KVIRNK 
Sbjct: 87  SYQQHQHQ--QHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKL 146

Query: 394 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRS-DNDPDLSI 453
           T  SEGYGFVEF S A AE+ LQNYSG  MPN++Q FR+NWA+FSTG+KR+ +N PDLS+
Sbjct: 147 TSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSV 206

Query: 454 FVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEM 513
           FVGDL+ DVTD LL+ETFS +YPSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A+TEM
Sbjct: 207 FVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEM 266

Query: 514 NDLCALVQQRPESLLDFSNSILHKED-IQQMVPLA------------------------- 573
           N      +Q    +     +I +++    Q V LA                         
Sbjct: 267 NGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIF 326

Query: 574 ---------------MVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQ 611
                            S   E++ +++                AE+A++ LN TVIGK 
Sbjct: 327 VGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKN 386

[Close]

BLAST of CaUC05G099270 vs. TAIR 10
Match: AT1G47490.2 (RNA-binding protein 47C )

HSP 1 Score: 294.7 bits (753), Expect = 1.9e-79
Identity = 164/269 (60.97%), Postives = 201/269 (74.72%), Query Frame = 0


Query: 12  EPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHHYQHHHLPIQH--SQPL 71
           E NQ    P  P   M+Y PP +++PH MM    PPP+  YH +  HHHL  Q   ++  
Sbjct: 37  EENQPKTSPTPPPHWMRY-PPTVIIPHQMMY--APPPFPPYHQYPNHHHLHHQSRGNKHQ 96

Query: 72  PGSGGENKTIWVGDLHHWMDESYLNSCFSS--IGEIAALKVIRNKQTGLSEGYGFVEFFS 131
               GENKTIWVGDLHHWMDE+YLNS F+S    EI ++KVIRNK  GLSEGYGFVEF S
Sbjct: 97  NAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFES 156

Query: 132 HATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDND-PDLSIFVGDLAADVTDSLL 191
           H  A+K L+ ++G  MPNT Q FRLNWA+FST +KR +N+ PDLSIFVGDL+ DV+D+LL
Sbjct: 157 HDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLL 216

Query: 192 YETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGA 251
           +ETFS K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG 
Sbjct: 217 HETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGP 276

Query: 252 ATPKKSSGFQQKHSPQDKMQSNGSDSQPQ 276
           ATP+K++G+QQ    Q     NG+ ++P+
Sbjct: 277 ATPRKTNGYQQ----QGGYMPNGTLTRPE 298

[Close]

BLAST of CaUC05G099270 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 293.9 bits (751), Expect = 3.2e-79
Identity = 197/418 (47.13%), Postives = 242/418 (57.89%), Query Frame = 0


Query: 270 SDSQPQEPNQRHQQPQQPWIP--MQYPPPAMVMPHHMMTPPLPPP--------------- 329
           S   PQ+  Q+  Q QQ W+    QYP  AM M         P P               
Sbjct: 30  STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89

Query: 330 --YMHYHHQYQHHHLPIQHSQPLPGSGGEN-KTIWVGDLHHWMDESYLNSCFSSIGEIAA 389
             Y  Y  Q Q HH   Q  QP  GSGG++ KT+WVGDL HWMDE+YL++CFS   E+++
Sbjct: 90  FQYAAYQQQQQQHHQSQQ--QPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSS 149

Query: 390 LKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKR-S 449
           +KVIRNKQT  SEGYGFVEF S + AE+ALQ++SGV MPN EQ FRLNWA+FSTG+KR S
Sbjct: 150 VKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRAS 209

Query: 450 DNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNE 509
           +N PDLSIFVGDLA DV+D++L ETF+ +YPSVK AKVVID+NTGRSKGYGFVRFGD+NE
Sbjct: 210 ENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENE 269

Query: 510 RSQAMTEMND-----------------LCALVQQRPESLL---------------DFSNS 569
           RS+AMTEMN                    A  QQ     L               + +NS
Sbjct: 270 RSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNS 329

Query: 570 ILH----KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVI 616
            +       D+ +   +   S+  E++ +++                AEEA+  LN TVI
Sbjct: 330 TIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVI 389

The following BLAST results are available for this feature:

BLAST of CaUC05G099270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452518.1	1.4e-156	70.78	PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo]	[more]
XP_022140707.1	1.7e-154	71.70	polyadenylate-binding protein RBP47-like [Momordica charantia]	[more]
XP_004141245.1	2.2e-154	70.28	polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8649857.1 hypothetical...	[more]
XP_023535397.1	1.1e-153	69.98	polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936173.1	4.1e-153	70.57	polyadenylate-binding protein RBP47C-like [Cucurbita moschata]	[more]

BLAST of CaUC05G099270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX79	2.2e-93	53.22	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]
Q9SX80	6.0e-91	52.46	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q9LEB3	1.5e-86	45.81	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0WW84	1.9e-81	47.56	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
F4I3B3	4.5e-78	47.13	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]

BLAST of CaUC05G099270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4T7	1.6e-158	78.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639100 PE=4 SV=1	[more]
A0A1S3BUU0	6.6e-157	70.78	polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523...	[more]
A0A6J1CHT5	8.0e-155	71.70	polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1FCI8	2.0e-153	70.57	polyadenylate-binding protein RBP47C-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1ILR0	3.4e-153	69.74	polyadenylate-binding protein RBP47C-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of CaUC05G099270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47490.1	1.6e-94	53.22	RNA-binding protein 47C	[more]
AT1G47500.1	4.3e-92	52.46	RNA-binding protein 47C'	[more]
AT3G19130.1	1.4e-82	47.56	RNA-binding protein 47B	[more]
AT1G47490.2	1.9e-79	60.97	RNA-binding protein 47C	[more]
AT1G49600.1	3.2e-79	47.13	RNA-binding protein 47A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 529..556
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..287
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 542..626
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 542..626
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 282..499 coord: 17..273
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 282..499 coord: 17..273
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 169..248 e-value: 4.60729E-46 score: 155.515
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 342..422 e-value: 4.63778E-42 score: 144.713
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 78..158 e-value: 4.02737E-42 score: 145.098
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 342..417 e-value: 1.5E-13 score: 61.0 coord: 78..153 e-value: 7.7E-14 score: 62.0 coord: 435..511 e-value: 7.8E-13 score: 58.6 coord: 171..245 e-value: 2.1E-18 score: 77.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 79..146 e-value: 1.1E-13 score: 50.8 coord: 172..241 e-value: 4.6E-15 score: 55.2 coord: 343..411 e-value: 9.7E-14 score: 51.0 coord: 436..497 e-value: 1.0E-13 score: 50.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 77..157 score: 14.726371
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 170..249 score: 16.84124
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 434..497 score: 14.248819
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 341..421 score: 14.777537
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 155..285 e-value: 5.8E-21 score: 77.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 340..420 e-value: 2.5E-22 score: 80.8 coord: 76..154 e-value: 1.7E-22 score: 81.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 433..507 e-value: 3.2E-17 score: 64.5
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 151..267
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 43..157
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 340..498

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G099270.1	CaUC05G099270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding