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CaUC05G098250 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCAACCAAACGCAGCAATGGCGCTGAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCCCGGCCGTCGCACCGCCGAAGAACAAGGTACTTTCACCCTTCTCTTCACTCCTCAATTTTCCGAGACGATGATTATTCATTTCTGTTTCCCCCAATTTTGGCGTAACTTCCAGGAATTTAGAGCGAGAAGTCACCGGCCGGTTGTAACCTGCCGGAAAAAGGATCTCCACCCCCAATTTTTCGAGGATGCTAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCAGTGGATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGATCCGCCTTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTCCTTAAGGGGGAAATCATTCTGCCCACAAAGCGCAAAGCCGGCAAAGGGAAGAAGAAGTAGAAGAGTGTGAAGATTTGAATTGGCTTGGTAATCAGTTAAAATCCAAATGCATATTGAGATTTTTGGTTCTTTCTATTGCATTATATATCTGTGTAATTTAGCAGAATCGATACTAATTTGTCTGAACCAAAAAATTTGTTTCTGTTAGTTGTATTGCCTTGCTAATTCTGAATGCTCAAAATGTTTTATGGGTATGAATGCACAATGGGATAGGTGTTTGGTGGGTGAGAAAATTCATGAAGGAAAAGAAAATTTGAGAAATTAGAATAGGAATTGATGGTGATGGCAACTGACGATGCAAATTCTTCAAGCTTTTGGGCAGTTTATTTGTGCAGGTG CCGCAACCAAACGCAGCAATGGCGCTGAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCCCGGCCGTCGCACCGCCGAAGAACAAGGAATTTAGAGCGAGAAGTCACCGGCCGGTTGTAACCTGCCGGAAAAAGGATCTCCACCCCCAATTTTTCGAGGATGCTAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCAGTGGATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGATCCGCCTTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTCCTTAAGGGGGAAATCATTCTGCCCACAAAGCGCAAAGCCGGCAAAGGGAAGAAGAAGTAGAAGAGTGTGAAGATTTGAATTGGCTTGGTAATCAGTTAAAATCCAAATGCATATTGAGATTTTTGGTTCTTTCTATTGCATTATATATCTGTGTAATTTAGCAGAATCGATACTAATTTGTCTGAACCAAAAAATTTGTTTCTGTTAGTTGTATTGCCTTGCTAATTCTGAATGCTCAAAATGTTTTATGGGTATGAATGCACAATGGGATAGGTGTTTGGTGGGTGAGAAAATTCATGAAGGAAAAGAAAATTTGAGAAATTAGAATAGGAATTGATGGTGATGGCAACTGACGATGCAAATTCTTCAAGCTTTTGGGCAGTTTATTTGTGCAGGTG ATGGCGCTGAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCCCGGCCGTCGCACCGCCGAAGAACAAGGAATTTAGAGCGAGAAGTCACCGGCCGGTTGTAACCTGCCGGAAAAAGGATCTCCACCCCCAATTTTTCGAGGATGCTAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACCCAGAAAGAGTATTCAGTGGATGTGTGGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGATCCGCCTTGCTCGTCGACGCCGACCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTCCTTAAGGGGGAAATCATTCTGCCCACAAAGCGCAAAGCCGGCAAAGGGAAGAAGAAGTAG MALNLTNSFLQLQRPISPAVAPPKNKEFRARSHRPVVTCRKKDLHPQFFEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKAGKGKKK Homology
BLAST of CaUC05G098250 vs. NCBI nr
Match: KAA0041569.1 (50S ribosomal protein L31 [Cucumis melo var. makuwa]) HSP 1 Score: 260.4 bits (664), Expect = 8.6e-66 Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of CaUC05G098250 vs. NCBI nr
Match: XP_008466538.1 (PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 50S ribosomal protein l31 [Cucumis melo subsp. melo]) HSP 1 Score: 260.4 bits (664), Expect = 8.6e-66 Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of CaUC05G098250 vs. NCBI nr
Match: XP_004147854.2 (50S ribosomal protein L31, chloroplastic [Cucumis sativus] >KGN59985.1 hypothetical protein Csa_001806 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 5.6e-65 Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 0
BLAST of CaUC05G098250 vs. NCBI nr
Match: XP_038896266.1 (50S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida]) HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64 Identity = 124/134 (92.54%), Postives = 130/134 (97.01%), Query Frame = 0
BLAST of CaUC05G098250 vs. NCBI nr
Match: XP_022975559.1 (50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 247.7 bits (631), Expect = 5.8e-62 Identity = 126/135 (93.33%), Postives = 127/135 (94.07%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy Swiss-Prot
Match: Q9FWS4 (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL31 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.1e-46 Identity = 95/144 (65.97%), Postives = 113/144 (78.47%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy Swiss-Prot
Match: P82249 (50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 PE=1 SV=2) HSP 1 Score: 177.2 bits (448), Expect = 1.3e-43 Identity = 89/134 (66.42%), Postives = 106/134 (79.10%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy Swiss-Prot
Match: Q110D6 (50S ribosomal protein L31 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=rpmE PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.5e-17 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy Swiss-Prot
Match: Q31L35 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpmE PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 7.7e-17 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy Swiss-Prot
Match: Q5N0T7 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpmE PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 7.7e-17 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy TrEMBL
Match: A0A5A7TJN6 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00310 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.2e-66 Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy TrEMBL
Match: E5GCI4 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.2e-66 Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy TrEMBL
Match: A0A1S3CRJ2 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.2e-66 Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy TrEMBL
Match: A0A0A0LDC9 (50S ribosomal protein L31 OS=Cucumis sativus OX=3659 GN=Csa_3G859720 PE=3 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 2.7e-65 Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 0
BLAST of CaUC05G098250 vs. ExPASy TrEMBL
Match: A0A6J1IKY2 (50S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111475090 PE=3 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.8e-62 Identity = 126/135 (93.33%), Postives = 127/135 (94.07%), Query Frame = 0
BLAST of CaUC05G098250 vs. TAIR 10
Match: AT1G75350.1 (Ribosomal protein L31 ) HSP 1 Score: 186.4 bits (472), Expect = 1.5e-47 Identity = 95/144 (65.97%), Postives = 113/144 (78.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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