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CaUC05G096300 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCCCAAGACCAGGTTGTAGGTCATTTGAGTGTGTAAGGAGAGCTTGGCATAGTGAAAGGCATCAACCCATTAGAGGTTCTCTTATTCAAGAGATTTTCAGGTTCATTCTTCATCTTTTCCCCTTCAAACCCTTTTCTTTTTTTTGGCTATGTTTGATTTTTGGGTGTCTAGGGTTGTTAGTGAAGTTCATTGCTGTGCTACTAAGAAGAATAAGGAGTGGCAAGAGAAGCTCCCCATTGTTGTTCTTAAAGCTGAAGAGATTTTGTATTCTAAAGCTGACTCTGAGGTGCCCTTTTTTTTTCTTTTGGTTTTTTTGATCCTTTATCAAAATTTCTATCATGTTTTGTTATATGGTCATTTTGTGAACCTGAGTGAGAACAATTAAGTTGTTGGTTGTAGCTCTGTTATGTTCTGTTTTTTTATCCTCAACTTTGAAAACACTTACTTTAATCCATATTGGCTATCTTGTATAAAGTAACATAGGGTTAAATTATAAAAAATAACCTTGAACTATACTCTTTTGTTTCAAAAGTAGCTCCTTACTTTTAAAAGTTGCAATATGATCTTTCATTTAGATTTTAAAATTAACTTAGAGGGTAGAAATCCTTCAGGGATTCAAGAAGAAAAATAGGATTGATACGGTGTAGTTTTGAAGAATAGGATTCTTTTTAGGTTTTAGGTCATTGTCACATCATTTCAAGTCCCATCTTTCATTCGAATTTCTAAATGATTTCTATCTTAAGTGAAGTTTTGAAACGTTTATAATAGGTTAAAGAGTAATATTGCAACCTTTGAAACTAGCCAAGTCCAAATATATATGTATATATTTCTTATTCTTTCTGCAAAGCGAGGAACTGAAACAGAAAAAACTGAAATAGCAATCAAAGTTCAAAGCTAATATAAACTCACATTGTTCATCTTTATACATCTGCACAGGCTGAATACATGGATATTACTACACTGTGGGCCCGAATAAATGAAGCGATTAATACGATAATTCGGCTTGATAAGGATGCCGAAACTGAGGAGTTTCTTCATCCTTGTATTGAAGGTGCCTCTGCAACATTTAATCTGTTACCACATTTTGTATCTTGACCAACTTTTGTATGTATGTCATTAAGAACTAAATGGTCAAATAGGTAACATAAATAAGTTAAAAGATCATAGTTTCAAACTATTGTCACCACTTATCGTCTCAAAGTTGTAGGATATCACTGTCGAGCAAGATGTTACGTAGGATTGTTCGAGATGTACGTGAGTTAGTTGTCACACCTATAGTTACCAATGTATAGGTTGTTTGAGTCCGATATTGAGAATACATGATTTATTGCAACATCTGGTTAGTCTTTGAAGCGGTTATCTTGCAAGATTAGTTCAAATGACGGTAGACTAAGATCGTTGTTTCGTAGGATCATTTGAGACATATGTAAGTTGGTTGAGATGCTTACAGTTATCAATATCTAAGCTATTGTTATTGAAAATCATAGATATGAAACTAATTAGTTTGAATTTGTATAACTGAGGATGATAATGGCTGTTTTATTCATAAATGTTTTGTTATAATTCCTAATCTTTTGTTTAAAACAAAAATTGAACTTGTCAGCTGCTCTCCATTTGGGTTGCACGTCAAGAAGATCGTCGAAGAGTAACCAAGGTAGTTATCTGAGGGGCTACCTTAATTCCTACACTCCACAGGTCTTAGATACATCAACTCACTACACCAACCCCATTAGACCAACTATTTTGAGTTCACAACATATTTCATATTGTCCAAATTTGTCAAAGCAGACGAGAAATGTACCGGAAGCCCAACCGAAAAACCAAAACCATGTTGGTGTTCCTAGCACAATCCCTACTTCAACTGTATATAAGAATGTTTGGCCATCAATTGGTAGCCAGCAGTTCCTAACAGAGACCGTTGTTGGATGGAACATGTTTTCTTTGTGTCCATTGTATCCCGGAAGCAATCAACACGTTTCTGGTATTGAAATCCAACCAAAGCCCCTCTACAACAATCCGAGTTTCTCCGGTCCAGCTCCGTTTAAGTACTTCCATTCCAATGATGTGATTGCTGCAAGGAACAGTAGAGTTGATTTGGTAAATAGTACTCTTCACAAGCAACAGAAAACAGTTTGTGATCTATCGTTGCGGTTGGGCCCTCTGTCCGTTCAACACTCAAGCATCAACAACGGGCAACCCAAGACGATCAAAGACATCAGTGCTAATACATCTCAAAAGAAGATAACAAGTTCTTCTGATTGCTCGTTCCAACTAGACAAAACGTTCCCCTTCTTCCCTCTCCATGGTACATATGGTGCATTAGATTCTCATTATCGAGGGAACAGAGTTTGA ATGCCCCCAAGACCAGGTTGTAGGTCATTTGAGTGTGTAAGGAGAGCTTGGCATAGTGAAAGGCATCAACCCATTAGAGGTTCTCTTATTCAAGAGATTTTCAGGGTTGTTAGTGAAGTTCATTGCTGTGCTACTAAGAAGAATAAGGAGTGGCAAGAGAAGCTCCCCATTGTTGTTCTTAAAGCTGAAGAGATTTTGTATTCTAAAGCTGACTCTGAGGCTGAATACATGGATATTACTACACTGTGGGCCCGAATAAATGAAGCGATTAATACGATAATTCGGCTTGATAAGGATGCCGAAACTGAGGAGTTTCTTCATCCTTGTATTGAAGCTGCTCTCCATTTGGGTTGCACGTCAAGAAGATCGTCGAAGAGTAACCAAGGTAGTTATCTGAGGGGCTACCTTAATTCCTACACTCCACAGACGAGAAATGTACCGGAAGCCCAACCGAAAAACCAAAACCATGTTGGTGTTCCTAGCACAATCCCTACTTCAACTGTATATAAGAATGTTTGGCCATCAATTGGTAGCCAGCAGTTCCTAACAGAGACCGTTGTTGGATGGAACATGTTTTCTTTGTGTCCATTGTATCCCGGAAGCAATCAACACGTTTCTGGTATTGAAATCCAACCAAAGCCCCTCTACAACAATCCGAGTTTCTCCGGTCCAGCTCCGTTTAAGTACTTCCATTCCAATGATGTGATTGCTGCAAGGAACAGTAGAGTTGATTTGGTAAATAGTACTCTTCACAAGCAACAGAAAACAGTTTGTGATCTATCGTTGCGGTTGGGCCCTCTGTCCGTTCAACACTCAAGCATCAACAACGGGCAACCCAAGACGATCAAAGACATCAGTGCTAATACATCTCAAAAGAAGATAACAAGTTCTTCTGATTGCTCGTTCCAACTAGACAAAACGTTCCCCTTCTTCCCTCTCCATGGTACATATGGTGCATTAGATTCTCATTATCGAGGGAACAGAGTTTGA ATGCCCCCAAGACCAGGTTGTAGGTCATTTGAGTGTGTAAGGAGAGCTTGGCATAGTGAAAGGCATCAACCCATTAGAGGTTCTCTTATTCAAGAGATTTTCAGGGTTGTTAGTGAAGTTCATTGCTGTGCTACTAAGAAGAATAAGGAGTGGCAAGAGAAGCTCCCCATTGTTGTTCTTAAAGCTGAAGAGATTTTGTATTCTAAAGCTGACTCTGAGGCTGAATACATGGATATTACTACACTGTGGGCCCGAATAAATGAAGCGATTAATACGATAATTCGGCTTGATAAGGATGCCGAAACTGAGGAGTTTCTTCATCCTTGTATTGAAGCTGCTCTCCATTTGGGTTGCACGTCAAGAAGATCGTCGAAGAGTAACCAAGGTAGTTATCTGAGGGGCTACCTTAATTCCTACACTCCACAGACGAGAAATGTACCGGAAGCCCAACCGAAAAACCAAAACCATGTTGGTGTTCCTAGCACAATCCCTACTTCAACTGTATATAAGAATGTTTGGCCATCAATTGGTAGCCAGCAGTTCCTAACAGAGACCGTTGTTGGATGGAACATGTTTTCTTTGTGTCCATTGTATCCCGGAAGCAATCAACACGTTTCTGGTATTGAAATCCAACCAAAGCCCCTCTACAACAATCCGAGTTTCTCCGGTCCAGCTCCGTTTAAGTACTTCCATTCCAATGATGTGATTGCTGCAAGGAACAGTAGAGTTGATTTGGTAAATAGTACTCTTCACAAGCAACAGAAAACAGTTTGTGATCTATCGTTGCGGTTGGGCCCTCTGTCCGTTCAACACTCAAGCATCAACAACGGGCAACCCAAGACGATCAAAGACATCAGTGCTAATACATCTCAAAAGAAGATAACAAGTTCTTCTGATTGCTCGTTCCAACTAGACAAAACGTTCCCCTTCTTCCCTCTCCATGGTACATATGGTGCATTAGATTCTCATTATCGAGGGAACAGAGTTTGA MPPRPGCRSFECVRRAWHSERHQPIRGSLIQEIFRVVSEVHCCATKKNKEWQEKLPIVVLKAEEILYSKADSEAEYMDITTLWARINEAINTIIRLDKDAETEEFLHPCIEAALHLGCTSRRSSKSNQGSYLRGYLNSYTPQTRNVPEAQPKNQNHVGVPSTIPTSTVYKNVWPSIGSQQFLTETVVGWNMFSLCPLYPGSNQHVSGIEIQPKPLYNNPSFSGPAPFKYFHSNDVIAARNSRVDLVNSTLHKQQKTVCDLSLRLGPLSVQHSSINNGQPKTIKDISANTSQKKITSSSDCSFQLDKTFPFFPLHGTYGALDSHYRGNRV Homology
BLAST of CaUC05G096300 vs. NCBI nr
Match: XP_038899374.1 (uncharacterized protein LOC120086684 [Benincasa hispida]) HSP 1 Score: 556.6 bits (1433), Expect = 1.4e-154 Identity = 281/354 (79.38%), Postives = 292/354 (82.49%), Query Frame = 0
BLAST of CaUC05G096300 vs. NCBI nr
Match: XP_011652481.1 (uncharacterized protein LOC101219225 [Cucumis sativus] >KGN60097.1 hypothetical protein Csa_002319 [Cucumis sativus]) HSP 1 Score: 535.0 bits (1377), Expect = 4.5e-148 Identity = 272/355 (76.62%), Postives = 288/355 (81.13%), Query Frame = 0
BLAST of CaUC05G096300 vs. NCBI nr
Match: XP_008466415.1 (PREDICTED: uncharacterized protein LOC103503829 [Cucumis melo] >TYK31437.1 uncharacterized protein E5676_scaffold455G007480 [Cucumis melo var. makuwa]) HSP 1 Score: 523.5 bits (1347), Expect = 1.3e-144 Identity = 269/355 (75.77%), Postives = 285/355 (80.28%), Query Frame = 0
BLAST of CaUC05G096300 vs. NCBI nr
Match: KAA0038814.1 (uncharacterized protein E6C27_scaffold92G003710 [Cucumis melo var. makuwa]) HSP 1 Score: 522.7 bits (1345), Expect = 2.3e-144 Identity = 269/355 (75.77%), Postives = 285/355 (80.28%), Query Frame = 0
BLAST of CaUC05G096300 vs. NCBI nr
Match: XP_023524265.1 (uncharacterized protein LOC111788219 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488.8 bits (1257), Expect = 3.7e-134 Identity = 250/348 (71.84%), Postives = 277/348 (79.60%), Query Frame = 0
BLAST of CaUC05G096300 vs. ExPASy TrEMBL
Match: A0A0A0LHA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878170 PE=4 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 2.2e-148 Identity = 272/355 (76.62%), Postives = 288/355 (81.13%), Query Frame = 0
BLAST of CaUC05G096300 vs. ExPASy TrEMBL
Match: A0A5D3E5M9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007480 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 6.5e-145 Identity = 269/355 (75.77%), Postives = 285/355 (80.28%), Query Frame = 0
BLAST of CaUC05G096300 vs. ExPASy TrEMBL
Match: A0A1S3CR62 (uncharacterized protein LOC103503829 OS=Cucumis melo OX=3656 GN=LOC103503829 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 6.5e-145 Identity = 269/355 (75.77%), Postives = 285/355 (80.28%), Query Frame = 0
BLAST of CaUC05G096300 vs. ExPASy TrEMBL
Match: A0A5A7T5Q7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003710 PE=4 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 1.1e-144 Identity = 269/355 (75.77%), Postives = 285/355 (80.28%), Query Frame = 0
BLAST of CaUC05G096300 vs. ExPASy TrEMBL
Match: A0A6J1FPE4 (uncharacterized protein LOC111445784 OS=Cucurbita moschata OX=3662 GN=LOC111445784 PE=4 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 2.6e-133 Identity = 249/348 (71.55%), Postives = 276/348 (79.31%), Query Frame = 0
BLAST of CaUC05G096300 vs. TAIR 10
Match: AT4G32295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 198.4 bits (503), Expect = 9.2e-51 Identity = 94/144 (65.28%), Postives = 116/144 (80.56%), Query Frame = 0
BLAST of CaUC05G096300 vs. TAIR 10
Match: AT3G24150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 187.2 bits (474), Expect = 2.1e-47 Identity = 93/170 (54.71%), Postives = 120/170 (70.59%), Query Frame = 0
BLAST of CaUC05G096300 vs. TAIR 10
Match: AT4G32295.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 4.9e-20 Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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